Clone Name | rbastl24b12 |
---|---|
Clone Library Name | barley_pub |
>gb|BC087747.1| Xenopus tropicalis cDNA clone IMAGE:6997995 Length = 1919 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 30 ctaaatttttaattgaggttcc 51 |||||||||||||||||||||| Sbjct: 1708 ctaaatttttaattgaggttcc 1729
>gb|AC129146.3| Rattus norvegicus 2 BAC CH230-266D19 (Children's Hospital Oakland Research Institute) complete sequence Length = 180291 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 aagaataaaagagaaaagccc 185 ||||||||||||||||||||| Sbjct: 98364 aagaataaaagagaaaagccc 98344
>gb|AC164163.2| Mus musculus BAC clone RP23-243L21 from chromosome 16, complete sequence Length = 178656 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 286 cacacccagcagtcacacaca 306 ||||||||||||||||||||| Sbjct: 54406 cacacccagcagtcacacaca 54386
>emb|BX936412.46| Zebrafish DNA sequence from clone DKEY-235H13, complete sequence Length = 178114 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 atatttaatattggtatcttg 21 ||||||||||||||||||||| Sbjct: 244 atatttaatattggtatcttg 224
>emb|CT030235.12| Mouse DNA sequence from clone RP23-240F19 on chromosome 16, complete sequence Length = 236028 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 286 cacacccagcagtcacacaca 306 ||||||||||||||||||||| Sbjct: 232149 cacacccagcagtcacacaca 232169
>gb|AC151369.4| Aotus nancymaae clone CH258-279B4, complete sequence Length = 196485 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 taaacatgaagatctcaaaa 155 |||||||||||||||||||| Sbjct: 30783 taaacatgaagatctcaaaa 30764
>gb|AC109460.3| Homo sapiens chromosome 16 clone RP11-264B17, complete sequence Length = 163424 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 gaagaataaaagagaaaagc 183 |||||||||||||||||||| Sbjct: 163054 gaagaataaaagagaaaagc 163073
>gb|AC125278.1| Mus musculus BAC clone RP24-481N2 from 12, complete sequence Length = 132398 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 283 atgcacacccagcagtcacacaca 306 ||||||||||||||| |||||||| Sbjct: 18530 atgcacacccagcagacacacaca 18553
>emb|AL591604.6| Human DNA sequence from clone RP11-356F4 on chromosome 1 Contains the 5' end of the SLICK gene for a sodium- and chloride-activated ATP-sensitive potassium channel, complete sequence Length = 185560 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 caactagctataaacatgaa 145 |||||||||||||||||||| Sbjct: 36677 caactagctataaacatgaa 36696
>emb|CR759959.15| Zebrafish DNA sequence from clone DKEY-253H15 in linkage group 5, complete sequence Length = 170133 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 168 aataaaagagaaaagcccct 187 |||||||||||||||||||| Sbjct: 8456 aataaaagagaaaagcccct 8437
>gb|AC112166.3| Homo sapiens chromosome 16 clone CTB-134H23, complete sequence Length = 131839 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 gaagaataaaagagaaaagc 183 |||||||||||||||||||| Sbjct: 70182 gaagaataaaagagaaaagc 70163
>gb|AC107877.4| Homo sapiens chromosome 8, clone RP11-74P9, complete sequence Length = 181925 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 aggaactaaatttttaattg 44 |||||||||||||||||||| Sbjct: 80041 aggaactaaatttttaattg 80022
>gb|AC026956.20| Homo sapiens chromosome 15, clone RP11-597K23, complete sequence Length = 215520 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 aggaactaaatttttaattg 44 |||||||||||||||||||| Sbjct: 210473 aggaactaaatttttaattg 210492
>gb|AC026624.8| Homo sapiens chromosome 15, clone RP11-652P10, complete sequence Length = 143709 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 aggaactaaatttttaattg 44 |||||||||||||||||||| Sbjct: 134525 aggaactaaatttttaattg 134506
>gb|AF002525.1|AF002525 Pterolebias xiphophorus 16S ribosomal RNA gene, mitochondrial gene for mitochondrial RNA, partial sequence Length = 457 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 caaccgaagaataaaagaga 178 |||||||||||||||||||| Sbjct: 242 caaccgaagaataaaagaga 223
>dbj|AP005364.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1970D8, complete sequence Length = 168850 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 aggaactaaatttttaattg 44 |||||||||||||||||||| Sbjct: 101638 aggaactaaatttttaattg 101619
>dbj|AP003789.1| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1433G4, complete sequence Length = 175784 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ctcaggaactaaatttttaa 41 |||||||||||||||||||| Sbjct: 35436 ctcaggaactaaatttttaa 35455 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,546,281 Number of Sequences: 3902068 Number of extensions: 3546281 Number of successful extensions: 68607 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 17 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 68569 Number of HSP's gapped (non-prelim): 38 length of query: 331 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 309 effective length of database: 17,147,199,772 effective search space: 5298484729548 effective search space used: 5298484729548 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)