Clone Name | rbastl24b11 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | PDLI7_CHICK (Q679P3) PDZ and LIM domain protein 7 (LIM mineraliz... | 30 | 2.2 | 2 | SPB8_BOVIN (Q5BIR5) Serpin B8 | 29 | 3.7 |
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>PDLI7_CHICK (Q679P3) PDZ and LIM domain protein 7 (LIM mineralization protein)| Length = 416 Score = 29.6 bits (65), Expect = 2.2 Identities = 12/19 (63%), Positives = 13/19 (68%) Frame = +1 Query: 43 QNWVHACGDRLCTTLQTMQ 99 QN + ACGDRLC TL Q Sbjct: 67 QNRIRACGDRLCLTLSRAQ 85
>SPB8_BOVIN (Q5BIR5) Serpin B8| Length = 374 Score = 28.9 bits (63), Expect = 3.7 Identities = 14/25 (56%), Positives = 16/25 (64%) Frame = +1 Query: 139 ASGAEAVIA*SRICR*SGKFWAGHP 213 A+GA AV+ SR CR KF A HP Sbjct: 328 AAGATAVVRNSRCCRMEPKFCADHP 352 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 38,790,577 Number of Sequences: 219361 Number of extensions: 714563 Number of successful extensions: 1484 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1464 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1484 length of database: 80,573,946 effective HSP length: 55 effective length of database: 68,509,091 effective search space used: 1644218184 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)