ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl24b04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MRPD_BACSU (O05229) Na(+)/H(+) antiporter subunit D (Multiple re... 32 0.65

>MRPD_BACSU (O05229) Na(+)/H(+) antiporter subunit D (Multiple resistance and|
           pH homeostasis protein D) (Mrp complex subunit D)
          Length = 493

 Score = 32.0 bits (71), Expect = 0.65
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = +3

Query: 150 NILFFLNAELCASNTILLTRHSFWENEEENPQTTFQHGKALVYP 281
           ++L  L++ L   + + +  H+FW  E+E P+   +  K L+YP
Sbjct: 408 SMLILLSSLLVLYSVLRIFIHAFWGEEKETPKPNHRTAKGLLYP 451


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,893,119
Number of Sequences: 219361
Number of extensions: 1240074
Number of successful extensions: 3095
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2788
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3084
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2453576370
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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