>DHH1_CANGA (Q6FQU5) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-)|
          Length = 507

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 16/54 (29%), Positives = 23/54 (42%)
 Frame = +3

Query: 3   PHPTHSTYSNTTEYRKQTHNATQTQPQPGHRVRRPGDTTFVLPQVSFSLFLPIP 164
           PH  H       + ++Q     Q Q Q G +   PG   F+ PQ     F+P+P
Sbjct: 420 PHIVHQRRMQEQQQQQQ-----QQQGQQGQQQGYPGQQAFIPPQQGQPQFMPVP 468

>SMAD1_HUMAN (Q15797) Mothers against decapentaplegic homolog 1 (SMAD 1)|
           (Mothers against DPP homolog 1) (Mad-related protein 1)
           (Transforming growth factor-beta signaling protein 1)
           (BSP-1) (hSMAD1) (JV4-1)
          Length = 465

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +3

Query: 3   PHPTHSTYSNTTEYRKQTHNATQTQPQPGHRVRRPGDT 116
           PH  +S+Y N+      T+  + T   PG   + P DT
Sbjct: 185 PHSPNSSYPNSPGSSSSTYPHSPTSSDPGSPFQMPADT 222


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,973,195
Number of Sequences: 219361
Number of extensions: 487795
Number of successful extensions: 1264
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1247
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1264
length of database: 80,573,946
effective HSP length: 66
effective length of database: 66,096,120
effective search space used: 1586306880
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)