ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl24a06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1DNAK_PSESG (Q9WWG9) Chaperone protein dnaK (Heat shock protein 7... 29 2.7
2DNAK_ANAVT (O05714) Chaperone protein dnaK (Heat shock protein 7... 29 3.5
3DNAK1_ANASP (Q9ZEJ6) Chaperone protein dnaK1 (Heat shock protein... 29 3.5
4DNAK_CORJK (Q4JXX6) Chaperone protein dnaK (Heat shock protein 7... 28 4.6
5FUT5_PONPY (Q8HYJ4) Alpha-(1,3)-fucosyltransferase (EC 2.4.1.65)... 28 7.8
6FUT5_PANTR (P56433) Alpha-(1,3)-fucosyltransferase (EC 2.4.1.65)... 28 7.8
7FUT6_PANTR (P56434) Alpha-(1,3)-fucosyltransferase (EC 2.4.1.65)... 28 7.8

>DNAK_PSESG (Q9WWG9) Chaperone protein dnaK (Heat shock protein 70) (Heat shock|
           70 kDa protein) (HSP70)
          Length = 638

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 18/75 (24%), Positives = 31/75 (41%)
 Frame = +1

Query: 49  PVHSGNQTRLQLVTALVDGIKMFLDEPPSNAEV*EHSEGSSVTTTFTSEHAMLGNSKNLH 228
           P+  G +    ++TAL+     FL   PS     ++ E +        E    G +K+L 
Sbjct: 396 PLTLGIEAMGGVMTALIKKTPRFLPRNPSVLTADDNQENAVAIHVLQGERKQAGQNKSLG 455

Query: 229 QIKA*GVSLTPRGIP 273
           +     +   PRG+P
Sbjct: 456 KFDLAEIPPAPRGVP 470



to top

>DNAK_ANAVT (O05714) Chaperone protein dnaK (Heat shock protein 70) (Heat shock|
           70 kDa protein) (HSP70)
          Length = 688

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +1

Query: 151 EHSEGSSVTTTFTSEHAMLGNSKNLHQIKA*GVSLTPRGIP 273
           E+++ S        E  M G++K+L + K  G+   PRGIP
Sbjct: 425 ENNQNSVEIHVVQGEREMAGDNKSLGRFKLYGIPPAPRGIP 465



to top

>DNAK1_ANASP (Q9ZEJ6) Chaperone protein dnaK1 (Heat shock protein 70-1) (Heat|
           shock 70 kDa protein 1) (HSP70-1)
          Length = 688

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +1

Query: 151 EHSEGSSVTTTFTSEHAMLGNSKNLHQIKA*GVSLTPRGIP 273
           E+++ S        E  M G++K+L + K  G+   PRGIP
Sbjct: 425 ENNQNSVEIHVVQGEREMAGDNKSLGRFKLYGIPPAPRGIP 465



to top

>DNAK_CORJK (Q4JXX6) Chaperone protein dnaK (Heat shock protein 70) (Heat shock|
           70 kDa protein) (HSP70)
          Length = 620

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 18/75 (24%), Positives = 33/75 (44%)
 Frame = +1

Query: 49  PVHSGNQTRLQLVTALVDGIKMFLDEPPSNAEV*EHSEGSSVTTTFTSEHAMLGNSKNLH 228
           P+  G +T+  ++T L++       +        E S+ S     F  E  M  ++K L 
Sbjct: 370 PLSLGIETKGGVMTKLIERNTTIPTKRSETFTTAEDSQPSVQIQVFQGEREMAAHNKLLG 429

Query: 229 QIKA*GVSLTPRGIP 273
             +  G++  PRG+P
Sbjct: 430 SFELAGIAPAPRGVP 444



to top

>FUT5_PONPY (Q8HYJ4) Alpha-(1,3)-fucosyltransferase (EC 2.4.1.65) (Galactoside|
           3-L-fucosyltransferase) (Fucosyltransferase 5) (FUCT-V)
           (Fuc-TV)
          Length = 374

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 18/56 (32%), Positives = 21/56 (37%), Gaps = 8/56 (14%)
 Frame = -1

Query: 170 EDPSLCSYTSAFDG--------GSSKNIFIPSTRAVTNCNLVWLPEWTGMPLVPTL 27
           E PS C +  A DG         S  +IF P           WL  W+G P  P L
Sbjct: 151 ESPSYCRHLEALDGYFNLTMSYRSDSDIFTPYG---------WLEPWSGQPAHPPL 197



to top

>FUT5_PANTR (P56433) Alpha-(1,3)-fucosyltransferase (EC 2.4.1.65) (Galactoside|
           3-L-fucosyltransferase) (Fucosyltransferase 5) (FUCT-V)
           (Fuc-TV)
          Length = 374

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 18/56 (32%), Positives = 22/56 (39%), Gaps = 8/56 (14%)
 Frame = -1

Query: 170 EDPSLCSYTSAFDG--------GSSKNIFIPSTRAVTNCNLVWLPEWTGMPLVPTL 27
           E PS C +  A DG         S  +IF P           WL  W+G P+ P L
Sbjct: 151 ESPSNCRHLEALDGYFNLTMSYRSDSDIFTPYG---------WLQPWSGQPVHPPL 197



to top

>FUT6_PANTR (P56434) Alpha-(1,3)-fucosyltransferase (EC 2.4.1.65) (Galactoside|
           3-L-fucosyltransferase) (Fucosyltransferase 6) (FUCT-VI)
          Length = 359

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 18/56 (32%), Positives = 22/56 (39%), Gaps = 8/56 (14%)
 Frame = -1

Query: 170 EDPSLCSYTSAFDG--------GSSKNIFIPSTRAVTNCNLVWLPEWTGMPLVPTL 27
           E PS C +  A DG         S  +IF P           WL  W+G P+ P L
Sbjct: 137 ESPSNCRHLEALDGYFNLTMSYRSDSDIFTPYG---------WLQPWSGQPVHPPL 183


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,789,259
Number of Sequences: 219361
Number of extensions: 952695
Number of successful extensions: 2606
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2546
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2606
length of database: 80,573,946
effective HSP length: 71
effective length of database: 64,999,315
effective search space used: 1559983560
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top