>ref|XM_464147.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3121

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                
Query: 250  tccctcactcctcgtggtattccgggttcttcttca 285
            |||||||||||||||  |||||||||||||||||||
Sbjct: 2770 tccctcactcctcgttatattccgggttcttcttca 2735

>ref|XM_506717.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1008_C03.11 mRNA
          Length = 3169

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                
Query: 250  tccctcactcctcgtggtattccgggttcttcttca 285
            |||||||||||||||  |||||||||||||||||||
Sbjct: 2777 tccctcactcctcgttatattccgggttcttcttca 2742

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                   
Query: 250     tccctcactcctcgtggtattccgggttcttcttca 285
               |||||||||||||||  |||||||||||||||||||
Sbjct: 2570749 tccctcactcctcgttatattccgggttcttcttca 2570714

>dbj|AP005288.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1008_C03
          Length = 103297

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                 
Query: 250   tccctcactcctcgtggtattccgggttcttcttca 285
             |||||||||||||||  |||||||||||||||||||
Sbjct: 49532 tccctcactcctcgttatattccgggttcttcttca 49497

>dbj|AK121963.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108C09, full
            insert sequence
          Length = 3120

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                
Query: 250  tccctcactcctcgtggtattccgggttcttcttca 285
            |||||||||||||||  |||||||||||||||||||
Sbjct: 2769 tccctcactcctcgttatattccgggttcttcttca 2734

>dbj|AK105609.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-B03, full
            insert sequence
          Length = 3169

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                
Query: 250  tccctcactcctcgtggtattccgggttcttcttca 285
            |||||||||||||||  |||||||||||||||||||
Sbjct: 2777 tccctcactcctcgttatattccgggttcttcttca 2742

>gb|AY104160.1| Zea mays PCO080306 mRNA sequence
          Length = 1460

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 254  tcactcctcgtggtattccgggttcttcttca 285
            ||||||||||||||| || |||||||||||||
Sbjct: 1044 tcactcctcgtggtactctgggttcttcttca 1013

>gb|AC102655.7| Mus musculus chromosome 19, clone RP23-13N2, complete sequence
          Length = 202294

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 105   aataaaaatgtttttggatgaa 126
             ||||||||||||||||||||||
Sbjct: 56757 aataaaaatgtttttggatgaa 56736

>gb|BT018338.1| Zea mays clone EL01T0403A05.c mRNA sequence
          Length = 1023

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 254 tcactcctcgtggtattccgggttcttcttcaaa 287
           |||||| || ||||| ||||||||||||||||||
Sbjct: 595 tcactcttcatggtactccgggttcttcttcaaa 562

>gb|DQ354446.1| Hypsiprymnodon moschatus breast and ovarian cancer susceptibility 1
            (BRCA1) gene, partial cds
          Length = 2389

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 113  tgtttttggatgaaccaccatcaaa 137
            ||||||||||||||| |||||||||
Sbjct: 1641 tgtttttggatgaacaaccatcaaa 1617

>ref|NM_105369.1| Arabidopsis thaliana glycerophosphodiester phosphodiesterase/ kinase
            AT1G66980 mRNA, complete cds
          Length = 3512

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 107  taaaaatgtttttggatgaa 126
            ||||||||||||||||||||
Sbjct: 3459 taaaaatgtttttggatgaa 3440

>gb|AC007152.9| Arabidopsis thaliana chromosome I BAC F1O19 genomic sequence, complete
             sequence
          Length = 90387

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 107   taaaaatgtttttggatgaa 126
             ||||||||||||||||||||
Sbjct: 27065 taaaaatgtttttggatgaa 27084

>emb|BX294171.10| Zebrafish DNA sequence from clone DKEY-263M10 in linkage group 1,
             complete sequence
          Length = 121187

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 213   ctccaaaaacttgcatcaga 232
             ||||||||||||||||||||
Sbjct: 30564 ctccaaaaacttgcatcaga 30545

>gb|AC090943.3| Homo sapiens chromosome 3 clone RP11-22O15 map 3p, complete sequence
          Length = 162949

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 137    atgccgaggtgtaagagcat 156
              ||||||||||||||||||||
Sbjct: 107859 atgccgaggtgtaagagcat 107878

>gb|AC008273.2| Homo sapiens BAC clone RP11-150O2 from 2, complete sequence
          Length = 151297

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 250   tccctcactcctcgtggtat 269
             ||||||||||||||||||||
Sbjct: 66748 tccctcactcctcgtggtat 66729

>gb|AC091291.2| Homo sapiens chromosome 3 clone RP11-654A18 map 3p, complete sequence
          Length = 184579

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 137   atgccgaggtgtaagagcat 156
             ||||||||||||||||||||
Sbjct: 65374 atgccgaggtgtaagagcat 65393

>emb|AL953916.14| Zebrafish DNA sequence from clone CH211-246I7 in linkage group 12,
              complete sequence
          Length = 177468

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 107    taaaaatgtttttggatgaa 126
              ||||||||||||||||||||
Sbjct: 161862 taaaaatgtttttggatgaa 161843

>emb|AL672058.5| Zebrafish DNA sequence from clone BUSM1-47J20 in linkage group 1,
              complete sequence
          Length = 130339

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 213    ctccaaaaacttgcatcaga 232
              ||||||||||||||||||||
Sbjct: 100541 ctccaaaaacttgcatcaga 100560

>emb|AL844859.5| Mouse DNA sequence from clone RP23-263O20 on chromosome 2, complete
             sequence
          Length = 151493

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 105   aataaaaatgtttttggatg 124
             ||||||||||||||||||||
Sbjct: 61609 aataaaaatgtttttggatg 61590


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,456,554
Number of Sequences: 3902068
Number of extensions: 2456554
Number of successful extensions: 44259
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 44223
Number of HSP's gapped (non-prelim): 36
length of query: 287
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 265
effective length of database: 17,147,199,772
effective search space: 4544007939580
effective search space used: 4544007939580
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)