>gb|AY107387.1| Zea mays PCO149313 mRNA sequence
          Length = 1336

 Score =  123 bits (62), Expect = 4e-25
 Identities = 77/82 (93%)
 Strand = Plus / Minus

                                                                        
Query: 292  tttacctcaccgccccttggggttcatgatctgcgagaagaccgcgctcggcgtcagccc 351
            |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 1086 tttacctcaccgccccttggggttcatgatctgcgagaagacggcgctaggcgtcagccc 1027

                                  
Query: 352  gtccgagtcgatgctcgcgacg 373
             |||||||| || |||||||||
Sbjct: 1026 atccgagtctatactcgcgacg 1005

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 63/68 (92%)
 Strand = Plus / Minus

                                                                            
Query: 293      ttacctcaccgccccttggggttcatgatctgcgagaagaccgcgctcggcgtcagcccg 352
                ||||||||||| ||||||||||||||||||||||||||||| || || ||||||||||| 
Sbjct: 12284690 ttacctcaccgtcccttggggttcatgatctgcgagaagacagcactaggcgtcagccca 12284631

                        
Query: 353      tccgagtc 360
                ||||||||
Sbjct: 12284630 tccgagtc 12284623

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 63/68 (92%)
 Strand = Plus / Minus

                                                                            
Query: 293      ttacctcaccgccccttggggttcatgatctgcgagaagaccgcgctcggcgtcagcccg 352
                ||||||||||| ||||||||||||||||||||||||||||| || || ||||||||||| 
Sbjct: 12281453 ttacctcaccgtcccttggggttcatgatctgcgagaagacagcactaggcgtcagccca 12281394

                        
Query: 353      tccgagtc 360
                ||||||||
Sbjct: 12281393 tccgagtc 12281386

>gb|AC137699.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0029K10, from chromosome 3, complete sequence
          Length = 135940

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 63/68 (92%)
 Strand = Plus / Minus

                                                                         
Query: 293   ttacctcaccgccccttggggttcatgatctgcgagaagaccgcgctcggcgtcagcccg 352
             ||||||||||| ||||||||||||||||||||||||||||| || || ||||||||||| 
Sbjct: 54223 ttacctcaccgtcccttggggttcatgatctgcgagaagacagcactaggcgtcagccca 54164

                     
Query: 353   tccgagtc 360
             ||||||||
Sbjct: 54163 tccgagtc 54156

>dbj|AK099791.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013097C16, full
            insert sequence
          Length = 3171

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 63/68 (92%)
 Strand = Plus / Minus

                                                                        
Query: 293  ttacctcaccgccccttggggttcatgatctgcgagaagaccgcgctcggcgtcagcccg 352
            ||||||||||| ||||||||||||||||||||||||||||| || || ||||||||||| 
Sbjct: 2929 ttacctcaccgtcccttggggttcatgatctgcgagaagacagcactaggcgtcagccca 2870

                    
Query: 353  tccgagtc 360
            ||||||||
Sbjct: 2869 tccgagtc 2862

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 62/70 (88%)
 Strand = Plus / Minus

                                                                            
Query: 297      ctcaccgccccttggggttcatgatctgcgagaagaccgcgctcggcgtcagcccgtccg 356
                ||||||| |||||||||||||||||||| |||||||| ||||| || || |||||||| |
Sbjct: 32458055 ctcaccgtcccttggggttcatgatctgtgagaagacagcgctaggagtaagcccgtcgg 32457996

                          
Query: 357      agtcgatgct 366
                |||| |||||
Sbjct: 32457995 agtctatgct 32457986

>dbj|AP003106.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0665A11
          Length = 166421

 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 62/70 (88%)
 Strand = Plus / Minus

                                                                         
Query: 297   ctcaccgccccttggggttcatgatctgcgagaagaccgcgctcggcgtcagcccgtccg 356
             ||||||| |||||||||||||||||||| |||||||| ||||| || || |||||||| |
Sbjct: 45576 ctcaccgtcccttggggttcatgatctgtgagaagacagcgctaggagtaagcccgtcgg 45517

                       
Query: 357   agtcgatgct 366
             |||| |||||
Sbjct: 45516 agtctatgct 45507

>dbj|AP003371.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1143G03
          Length = 137770

 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 62/70 (88%)
 Strand = Plus / Minus

                                                                          
Query: 297    ctcaccgccccttggggttcatgatctgcgagaagaccgcgctcggcgtcagcccgtccg 356
              ||||||| |||||||||||||||||||| |||||||| ||||| || || |||||||| |
Sbjct: 137552 ctcaccgtcccttggggttcatgatctgtgagaagacagcgctaggagtaagcccgtcgg 137493

                        
Query: 357    agtcgatgct 366
              |||| |||||
Sbjct: 137492 agtctatgct 137483

>dbj|AK105465.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-126-A03, full
            insert sequence
          Length = 1761

 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 62/70 (88%)
 Strand = Plus / Minus

                                                                        
Query: 297  ctcaccgccccttggggttcatgatctgcgagaagaccgcgctcggcgtcagcccgtccg 356
            ||||||| |||||||||||||||||||| |||||||| ||||| || || |||||||| |
Sbjct: 1505 ctcaccgtcccttggggttcatgatctgtgagaagacagcgctaggagtaagcccgtcgg 1446

                      
Query: 357  agtcgatgct 366
            |||| |||||
Sbjct: 1445 agtctatgct 1436

>dbj|AK101775.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033064M23, full
            insert sequence
          Length = 3155

 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 62/70 (88%)
 Strand = Plus / Minus

                                                                        
Query: 297  ctcaccgccccttggggttcatgatctgcgagaagaccgcgctcggcgtcagcccgtccg 356
            ||||||| |||||||||||||||||||| |||||||| ||||| || || |||||||| |
Sbjct: 2922 ctcaccgtcccttggggttcatgatctgtgagaagacagcgctaggagtaagcccgtcgg 2863

                      
Query: 357  agtcgatgct 366
            |||| |||||
Sbjct: 2862 agtctatgct 2853

>ref|NM_191406.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2691

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 61/69 (88%)
 Strand = Plus / Minus

                                                                        
Query: 298  tcaccgccccttggggttcatgatctgcgagaagaccgcgctcggcgtcagcccgtccga 357
            |||||| |||||||||||||||||||| |||||||| ||||| || || |||||||| ||
Sbjct: 2691 tcaccgtcccttggggttcatgatctgtgagaagacagcgctaggagtaagcccgtcgga 2632

                     
Query: 358  gtcgatgct 366
            ||| |||||
Sbjct: 2631 gtctatgct 2623

>emb|CR848816.11| Zebrafish DNA sequence from clone DKEY-99F10 in linkage group 11,
            complete sequence
          Length = 158354

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 234  atgaaaacacattgaatgaataaatt 259
            ||||||||||||| ||||||||||||
Sbjct: 7425 atgaaaacacatttaatgaataaatt 7450

>emb|AL592283.5| Mouse DNA sequence from clone RP23-386C23 on chromosome 4, complete
             sequence
          Length = 197763

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 185   caaggcaaggcagaaatgtcta 206
             ||||||||||||||||||||||
Sbjct: 93886 caaggcaaggcagaaatgtcta 93865

>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome
          Length = 2560265

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 338     ctcggcgtcagcccgtccgag 358
               |||||||||||||||||||||
Sbjct: 1910765 ctcggcgtcagcccgtccgag 1910745

>gb|AC144645.17| Medicago truncatula clone mth2-11e15, complete sequence
          Length = 124394

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 231   ctcatgaaaacacattgaatg 251
             |||||||||||||||||||||
Sbjct: 55325 ctcatgaaaacacattgaatg 55345

>gb|AC013480.12| Homo sapiens BAC clone RP11-564O16 from 2, complete sequence
          Length = 128466

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 238  aaacacattgaatgaataaat 258
            |||||||||||||||||||||
Sbjct: 9561 aaacacattgaatgaataaat 9541

>ref|XM_640880.1| Dictyostelium discoideum hypothetical protein (DDB0216656), partial
            mRNA
          Length = 3588

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 235  tgaaaacacattgaatgaat 254
            ||||||||||||||||||||
Sbjct: 3025 tgaaaacacattgaatgaat 3006

>gb|AC170739.3| Sorex araneus clone SA_Ba-515F19, complete sequence
          Length = 101541

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 44    atgaagacagaaaaagggaa 63
             ||||||||||||||||||||
Sbjct: 47037 atgaagacagaaaaagggaa 47056

>gb|AC117686.10| Mus musculus chromosome 16, clone RP23-440B15, complete sequence
          Length = 210851

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 230  actcatgaaaacacattgaa 249
            ||||||||||||||||||||
Sbjct: 6051 actcatgaaaacacattgaa 6032

>gb|AC129601.4| Mus musculus BAC clone RP23-444N1 from chromosome 16, complete sequence
          Length = 173054

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 230    actcatgaaaacacattgaa 249
              ||||||||||||||||||||
Sbjct: 134936 actcatgaaaacacattgaa 134917

>ref|XM_759090.1| Theileria parva strain Muguga chromosome 4 hypothetical protein
           (TP04_0548) partial mRNA
          Length = 1131

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 158 tcattacaacgctgaagaagaaga 181
           |||||| |||||||||||||||||
Sbjct: 8   tcattaaaacgctgaagaagaaga 31

>emb|AL359878.13| Human DNA sequence from clone RP11-363N22 on chromosome 10 Contains the
             5' end of gene KIAA0217, a novel gene, the 5' end of the
             gene for G protein-binding protein CRFG (NGB FLJ10686
             FLJ10690 FLJ39774) and four CpG islands, complete sequence
          Length = 184289

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 247   gaatgaataaattagggccg 266
             ||||||||||||||||||||
Sbjct: 94716 gaatgaataaattagggccg 94735

>emb|AL163191.2|SPAC140 S.pombe chromosome I cosmid c140
          Length = 15326

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 171   gaagaagaagaatacaaggc 190
             ||||||||||||||||||||
Sbjct: 12297 gaagaagaagaatacaaggc 12278

>gb|AC109447.2| Homo sapiens chromosome 5 clone RP11-104C13, complete sequence
          Length = 172544

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 47    aagacagaaaaagggaaaag 66
             ||||||||||||||||||||
Sbjct: 53891 aagacagaaaaagggaaaag 53910

>gb|AC024566.5|AC024566 Homo sapiens chromosome 5 clone CTD-2135M18, complete sequence
          Length = 145957

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 47   aagacagaaaaagggaaaag 66
            ||||||||||||||||||||
Sbjct: 2263 aagacagaaaaagggaaaag 2244

>gb|AC111099.15| Mus musculus chromosome 1, clone RP23-177A20, complete sequence
          Length = 195979

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 235   tgaaaacacattgaatgaataaat 258
             ||||||||||||||||||| ||||
Sbjct: 53339 tgaaaacacattgaatgaaaaaat 53316

>gb|AC009349.6|AC009349 Drosophila melanogaster, chromosome 3R, region 100C-100C, BAC clone
             BACR10O09, complete sequence
          Length = 165555

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 245   ttgaatgaataaattagggc 264
             ||||||||||||||||||||
Sbjct: 11693 ttgaatgaataaattagggc 11712

>gb|AC008287.4|AC008287 Drosophila melanogaster, chromosome 3R, region 100C-100C, BAC clone
              BACR02G16, complete sequence
          Length = 177480

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 245    ttgaatgaataaattagggc 264
              ||||||||||||||||||||
Sbjct: 101623 ttgaatgaataaattagggc 101642

>gb|AC012680.5|AC012680 Arabidopsis thaliana chromosome 1 BAC T11I11 genomic sequence, complete
             sequence
          Length = 69506

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 169   ctgaagaagaagaatacaaggcaa 192
             |||||||||||||| |||||||||
Sbjct: 16015 ctgaagaagaagaagacaaggcaa 16038

>gb|AE003778.3| Drosophila melanogaster chromosome 3R, section 116 of 118 of the
             complete sequence
          Length = 225974

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 245   ttgaatgaataaattagggc 264
             ||||||||||||||||||||
Sbjct: 83890 ttgaatgaataaattagggc 83909

>emb|AL355177.14| Mouse DNA sequence from clone RP21-61H21 on chromosome 5, complete
             sequence
          Length = 134781

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 226   tgaaactcatgaaaacacat 245
             ||||||||||||||||||||
Sbjct: 98404 tgaaactcatgaaaacacat 98385


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,301,051
Number of Sequences: 3902068
Number of extensions: 4301051
Number of successful extensions: 87344
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 87211
Number of HSP's gapped (non-prelim): 133
length of query: 373
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 351
effective length of database: 17,147,199,772
effective search space: 6018667119972
effective search space used: 6018667119972
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)