>LEF4_NPVAC (P41477) Late expression factor 4|
          Length = 464

 Score = 31.2 bits (69), Expect = 0.69
 Identities = 16/45 (35%), Positives = 25/45 (55%)
 Frame = +1

Query: 43  KVSYYNNFSS*LYPQDFLHHVLNMYIIDNTRILQRYTYSYKKKNW 177
           ++SY  NFS     QD L+ +LN YI+ N  + Q+Y   Y +  +
Sbjct: 11  EISYSINFS-----QDLLYKILNSYIVPNYSLAQQYFDLYDENGF 50

>ZO3_HUMAN (O95049) Tight junction protein ZO-3 (Zonula occludens 3 protein)|
           (Zona occludens 3 protein) (Tight junction protein 3)
          Length = 933

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 24/75 (32%), Positives = 36/75 (48%)
 Frame = +3

Query: 3   KELTSKAVQFRHNKSVILQQLQFLTVPPGLPAPRAKYVHHRQHAHLATLHIFLQEKKLVL 182
           K L  + VQ +  KSV++++    +   G+      ++ H   + LA  H  LQE  L+L
Sbjct: 181 KRLPRQDVQMKPVKSVLVKRRD--SEEFGVKLGSQIFIKHITDSGLAARHRGLQEGDLIL 238

Query: 183 QSNTVKLPMLSSNTT 227
           Q N V    LS N T
Sbjct: 239 QINGVSSQNLSLNDT 253

>ZN483_HUMAN (Q8TF39) Zinc finger protein 483|
          Length = 744

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 26/78 (33%), Positives = 32/78 (41%), Gaps = 7/78 (8%)
 Frame = +3

Query: 36  HNKSVILQQL---QFLTVPPGLPAPRAKYVHHRQHAHLATL----HIFLQEKKLVLQSNT 194
           H K  IL+ L   QFLT+ PG      K  H      + TL       L+EK  V Q +T
Sbjct: 86  HTKEQILELLVFEQFLTILPGEIRIWVKSQHPESSEEVVTLIEDLTQMLEEKDPVSQDST 145

Query: 195 VKLPMLSSNTTSLTTCKN 248
           V     S     +T C N
Sbjct: 146 VSQEENSKEDKMVTVCPN 163

>CFAH_BOVIN (Q28085) Complement factor H (H factor 1) (Fragments)|
          Length = 685

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 15/63 (23%), Positives = 32/63 (50%)
 Frame = +3

Query: 54  LQQLQFLTVPPGLPAPRAKYVHHRQHAHLATLHIFLQEKKLVLQSNTVKLPMLSSNTTSL 233
           +++++   +PP LP  + K +H  ++AH   +      K L+  S+  K+  +   +T+L
Sbjct: 548 VKKVKSCALPPELPNGKRKEIHKEEYAHNEVVEYACNPKFLMKGSH--KIQCVDGESTAL 605

Query: 234 TTC 242
             C
Sbjct: 606 PVC 608

>LBD13_ARATH (Q9AT61) LOB domain protein 13|
          Length = 268

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 19/65 (29%), Positives = 30/65 (46%)
 Frame = +3

Query: 81  PPGLPAPRAKYVHHRQHAHLATLHIFLQEKKLVLQSNTVKLPMLSSNTTSLTTCKN*PPG 260
           PP  P PR   +   Q A   T  + L    +V+ S++      SSN+++  +  N PP 
Sbjct: 196 PPPPPTPRPPRLLSSQPAPPPTPPVSLPSPSMVVSSSS------SSNSSATNSMYNPPPS 249

Query: 261 TTCTY 275
           +T  Y
Sbjct: 250 STAGY 254

>YR061_MIMIV (Q5UPD3) Putative BTB/POZ domain and WD-repeat protein R61|
          Length = 496

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +1

Query: 106 LNMYIIDNTRILQRYTYSYKKKNWCFSRTQ*SCQC 210
           + ++ IDN  +++ +   YK  + CFS    SC C
Sbjct: 233 IKLWNIDNREVIKEFQCDYKINDICFSPDGKSCVC 267

>SLOU_DROME (P22807) Homeobox protein slou (S59/2) (Protein slouch) (Homeobox|
           protein NK-1)
          Length = 659

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +3

Query: 33  RHNKSVILQQLQFLTVPPGLPAPRAKYVHHRQHAH 137
           +H  + +LQQ   L   P   A   +++HH QH H
Sbjct: 175 QHPHAALLQQHPHLLQNPQFLAAAQQHMHHHQHQH 209

>SYL_UREPA (Q9PQC0) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)|
           (LeuRS)
          Length = 806

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +1

Query: 100 HVLNMYIIDNTRILQRYTYSYKKKNWCFSR 189
           +VLN Y+I N   L +   +YK +NW FSR
Sbjct: 394 NVLNDYLIKNH--LGKKVANYKLRNWIFSR 421

>POLG_CX16G (Q65900) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat|
           protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein
           VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein
           P2A); Core protein P2B; Core protein P2C; Core protein
           P3A; Genome
          Length = 2192

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +3

Query: 24  VQFRHNKSVILQQLQFLTVPPGLPAPRAK 110
           V  + N  ++ Q LQ++ VPPG P P ++
Sbjct: 702 VAAKPNGELVPQLLQYMYVPPGAPKPTSR 730

>SEY1_SCHPO (Q9UTE0) Protein sey1|
          Length = 762

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 10/33 (30%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
 Frame = +1

Query: 94  LHHVLNMYI-IDNTRILQRYTYSYKKKNWCFSR 189
           + +++  Y+ ID+T+  + Y  ++KK +W F R
Sbjct: 499 IKNIVPFYVDIDDTKTTEEYIINFKKNSWLFFR 531


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,518,938
Number of Sequences: 219361
Number of extensions: 632504
Number of successful extensions: 1518
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1516
length of database: 80,573,946
effective HSP length: 79
effective length of database: 63,244,427
effective search space used: 1517866248
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)