Clone Name | rbastl23h03 |
---|---|
Clone Library Name | barley_pub |
>PLSC_YEAST (P33333) Probable 1-acyl-sn-glycerol-3-phosphate acyltransferase| (EC 2.3.1.51) (1-AGP acyltransferase) (1-AGPAT) (Lysophosphatidic acid acyltransferase) (LPAAT) Length = 303 Score = 29.3 bits (64), Expect = 2.4 Identities = 17/63 (26%), Positives = 27/63 (42%) Frame = +2 Query: 116 GRHASKMYTKQTQLGKSWSFYLQISQVTVPASAFQLSGTLHSLGHDRKWDDHPVPPVPIE 295 G A K+ + K + I+ T+P A + + H ++K + PVP V I Sbjct: 228 GEFAEKVRDQMVDTLKEIGYSPAINDTTLPPQAIEYAALQHDKKVNKKIKNEPVPSVSIS 287 Query: 296 LDV 304 DV Sbjct: 288 NDV 290
>YT32_STRFR (P20185) Hypothetical 32.6 kDa protein in transposon Tn4556| Length = 305 Score = 28.5 bits (62), Expect = 4.1 Identities = 15/35 (42%), Positives = 16/35 (45%) Frame = -2 Query: 371 RAEAARDIHRECHHE*LFCELRGRRVLWGQGAPGG 267 R AAR H+ CH L R R LW G GG Sbjct: 245 RRAAARVRHQRCHRAGLRSPPRTREPLWSLGPSGG 279
>ADHA_CLOAB (Q04944) NADH-dependent butanol dehydrogenase A (EC 1.1.1.-) (BDH| I) Length = 389 Score = 28.1 bits (61), Expect = 5.3 Identities = 13/24 (54%), Positives = 17/24 (70%) Frame = +2 Query: 206 ASAFQLSGTLHSLGHDRKWDDHPV 277 AS+ ++G L SLG DRKW HP+ Sbjct: 247 ASSLAINGLL-SLGKDRKWSCHPM 269
>LOXC2_ORYSA (Q84YK8) Probable lipoxygenase 8, chloroplast precursor (EC| 1.13.11.12) Length = 941 Score = 28.1 bits (61), Expect = 5.3 Identities = 14/46 (30%), Positives = 21/46 (45%) Frame = +2 Query: 170 SFYLQISQVTVPASAFQLSGTLHSLGHDRKWDDHPVPPVPIELDVP 307 S +L++ + A + T+HS H DDH V + DVP Sbjct: 131 SLFLELVSSELEAKTGKKKATVHSYAHKVDDDDHGVVTYEADFDVP 176
>UL21A_HCMVA (Q7M6R1) Hypothetical protein UL21A| Length = 123 Score = 28.1 bits (61), Expect = 5.3 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = +2 Query: 305 PEARRRVTHGGIHDECHELLLPAGDEE 385 P ARRR+ IH E +L+ GDEE Sbjct: 38 PRARRRLFQNHIHPEQRRVLVGEGDEE 64
>B2MG_PIG (Q07717) Beta-2-microglobulin precursor (Lactollin)| Length = 118 Score = 27.7 bits (60), Expect = 7.0 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 7/58 (12%) Frame = +2 Query: 119 RHASKMYTKQTQLG--KSWSFYLQISQVTVPASAFQLSGTLHSLGHDR----KWD-DH 271 ++ KM +Q+ L K WSFYL + P + Q S + + D+ KWD DH Sbjct: 61 KNGEKMNAEQSDLSFSKDWSFYLLVHTEFTPNAVDQYSCRVKHVTLDKPKIVKWDRDH 118
>VA3_SOLIN (P35778) Venom allergen 3 precursor (Venom allergen III) (Allergen| Sol i 3) (Sol i III) Length = 234 Score = 27.7 bits (60), Expect = 7.0 Identities = 13/49 (26%), Positives = 20/49 (40%) Frame = +3 Query: 3 EKDFSFIIKRWASSCTFXXXXXXXXXXXXVNSNSSTYMDDMLQKCTPNK 149 + + + I +RWA+ CTF V N + K TPN+ Sbjct: 104 DPELATIAQRWANQCTFEHDACRNVERFAVGQNIAATSSSGKNKSTPNE 152
>CUTI_PHYCP (P41754) Putative cutinase (EC 3.1.1.74) (Cutin hydrolase)| Length = 210 Score = 27.7 bits (60), Expect = 7.0 Identities = 26/84 (30%), Positives = 34/84 (40%) Frame = +3 Query: 111 YMDDMLQKCTPNKHN*VNPGHSTSRSVRSPFRRQLFSYQELYTALDMTVNGMTTRCPLSP 290 YM DM C N HS+S+S RS R + S+ +Y+A V C L P Sbjct: 107 YMHDMFSPCISGV---ANSQHSSSQSPRSHCRSLVPSFIAIYSA--SVVLCALISCFLDP 161 Query: 291 *NSTSPKLAEELLMVAFTMNVTSC 362 +T P NVT+C Sbjct: 162 YETTLP-----------LTNVTNC 174 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 55,555,592 Number of Sequences: 219361 Number of extensions: 1126402 Number of successful extensions: 2844 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 2801 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2844 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 1386249648 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)