ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbastl23b10 |
|---|---|
| Clone Library Name | barley_pub |
>LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC 1.13.11.12)| (LOX-100) (LOX2:Hv:1) Length = 936 Score = 149 bits (375), Expect = 2e-36 Identities = 73/78 (93%), Positives = 73/78 (93%), Gaps = 5/78 (6%) Frame = -3 Query: 360 AWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPS-----DGD 196 AWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPS DGD Sbjct: 859 AWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDGD 918 Query: 195 PTDEKMVMEMGIPNSISI 142 PTDEKMVMEMGIPNSISI Sbjct: 919 PTDEKMVMEMGIPNSISI 936
>LOX22_HORVU (Q8GSM3) Lipoxygenase 2.2, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:2) Length = 932 Score = 105 bits (263), Expect = 2e-23 Identities = 47/73 (64%), Positives = 59/73 (80%) Frame = -3 Query: 360 AWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEK 181 AW +DG +++AF+ F++ R I EQV+EWN D R+NRHGAG+VPYVLLRP +G+P D K Sbjct: 860 AWQRDGEVDKAFQVFQKKMRDIAEQVEEWNKDDSRRNRHGAGVVPYVLLRPLNGNPMDAK 919 Query: 180 MVMEMGIPNSISI 142 VMEMGIPNSISI Sbjct: 920 TVMEMGIPNSISI 932
>LOX23_HORVU (Q8GSM2) Lipoxygenase 2.3, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:3) Length = 896 Score = 59.3 bits (142), Expect = 2e-09 Identities = 32/73 (43%), Positives = 43/73 (58%) Frame = -3 Query: 360 AWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEK 181 AW + ++ AFE+F ++ +D NN+P+ KNR GAG+VPY LL+ P E Sbjct: 829 AWLAEPMVKAAFEKFSGRLKEAEGTIDMRNNNPENKNRCGAGIVPYELLK-----PFSEP 883 Query: 180 MVMEMGIPNSISI 142 V GIPNSISI Sbjct: 884 GVTGRGIPNSISI 896
>LOX5_ORYSA (Q7XV13) Putative lipoxygenase 5 (EC 1.13.11.12)| Length = 899 Score = 57.8 bits (138), Expect = 6e-09 Identities = 29/73 (39%), Positives = 41/73 (56%) Frame = -3 Query: 360 AWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEK 181 AWT D A EF R+ E+++ N DP R+NR GAG++PY L+ PS G Sbjct: 832 AWTADPAALAAAREFAADVRRAEEEIERRNADPSRRNRCGAGVLPYELMAPSSGPG---- 887 Query: 180 MVMEMGIPNSISI 142 + G+PNS++I Sbjct: 888 -ITCRGVPNSVTI 899
>LOXC_ARATH (P38418) Lipoxygenase, chloroplast precursor (EC 1.13.11.12)| Length = 896 Score = 56.2 bits (134), Expect = 2e-08 Identities = 33/73 (45%), Positives = 42/73 (57%) Frame = -3 Query: 360 AWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEK 181 +W + VIN AFE FK + + +DE N + KNR GAG+V Y LL+ PT E Sbjct: 829 SWANEPVINAAFERFKGKLQYLEGVIDERNVNITLKNRAGAGVVKYELLK-----PTSEH 883 Query: 180 MVMEMGIPNSISI 142 V MG+P SISI Sbjct: 884 GVTGMGVPYSISI 896
>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)| Length = 866 Score = 54.7 bits (130), Expect = 5e-08 Identities = 30/72 (41%), Positives = 42/72 (58%) Frame = -3 Query: 357 WTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKM 178 WT D V +AF+ F + +I E++ + NND +NR+G +PY LL PS E+ Sbjct: 800 WTTDSVPKEAFKRFGKKLAEIEEKLTQRNNDESLRNRYGPVKMPYTLLYPS-----SEEG 854 Query: 177 VMEMGIPNSISI 142 + GIPNSISI Sbjct: 855 LTCRGIPNSISI 866
>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)| Length = 859 Score = 52.8 bits (125), Expect = 2e-07 Identities = 30/72 (41%), Positives = 40/72 (55%) Frame = -3 Query: 357 WTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKM 178 W + +AFE+F E ++I + +DE N+D KNR G +PY LL PS E Sbjct: 793 WAAEKEALEAFEKFGEKVKEIEKNIDERNDDETLKNRTGLVKMPYTLLFPS-----SEGG 847 Query: 177 VMEMGIPNSISI 142 V GIPNS+SI Sbjct: 848 VTGRGIPNSVSI 859
>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)| Length = 877 Score = 52.8 bits (125), Expect = 2e-07 Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 2/74 (2%) Frame = -3 Query: 357 WTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEK- 181 WT D AF+ F I ++ + N + KNR+G +PY+LL P+ D T EK Sbjct: 804 WTSDAKALDAFKRFGSRLVDIENRIKDMNGNSALKNRNGPVKMPYMLLYPNTSDVTKEKG 863 Query: 180 -MVMEMGIPNSISI 142 + MGIPNSISI Sbjct: 864 QGLTAMGIPNSISI 877
>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)| Length = 870 Score = 52.4 bits (124), Expect = 3e-07 Identities = 31/73 (42%), Positives = 37/73 (50%), Gaps = 1/73 (1%) Frame = -3 Query: 357 WTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGD-PTDEK 181 WT D +AF+ F +I +V N DP RKNR G PY LL P+ D D Sbjct: 798 WTSDAKALEAFKRFGARLTEIESRVVAMNKDPHRKNRVGPTNFPYTLLYPNTSDLKGDAA 857 Query: 180 MVMEMGIPNSISI 142 + GIPNSISI Sbjct: 858 GLSARGIPNSISI 870
>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)| Length = 866 Score = 51.2 bits (121), Expect = 6e-07 Identities = 30/74 (40%), Positives = 38/74 (51%), Gaps = 1/74 (1%) Frame = -3 Query: 360 AWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEK 181 AWT D +AF F + +I +V N D KNR+G PY+LL P+ D T Sbjct: 793 AWTSDARALEAFRRFSDRLVEIEGKVVGMNGDAGLKNRNGPAEFPYMLLYPNTSDVTGAA 852 Query: 180 M-VMEMGIPNSISI 142 + GIPNSISI Sbjct: 853 AGITAKGIPNSISI 866
>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 50.8 bits (120), Expect = 8e-07 Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 1/73 (1%) Frame = -3 Query: 357 WTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKM 178 WT D + F+ F + +I +V N+DP+ KNR+G PY+LL P+ D Sbjct: 790 WTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAA 849 Query: 177 -VMEMGIPNSISI 142 + GIPNSISI Sbjct: 850 GLTAKGIPNSISI 862
>LOXC1_ORYSA (P38419) Lipoxygenase 7, chloroplast precursor (EC 1.13.11.12)| Length = 924 Score = 50.4 bits (119), Expect = 1e-06 Identities = 27/72 (37%), Positives = 38/72 (52%) Frame = -3 Query: 357 WTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKM 178 W D + A++ F ++I +D N D KNR GAG++PY L++ P + Sbjct: 858 WNSDAAVQAAYDGFAARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMK-----PFSDSG 912 Query: 177 VMEMGIPNSISI 142 V MGIPNS SI Sbjct: 913 VTGMGIPNSTSI 924
>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)| Length = 839 Score = 50.4 bits (119), Expect = 1e-06 Identities = 31/73 (42%), Positives = 41/73 (56%), Gaps = 1/73 (1%) Frame = -3 Query: 357 WTKDGVINQAFEEFKESTRKIVEQVDEWNNDPD-RKNRHGAGMVPYVLLRPSDGDPTDEK 181 WT D QAF++F ++I E++ NNDP + NR G +PY LL PS E+ Sbjct: 772 WTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPS-----SEE 826 Query: 180 MVMEMGIPNSISI 142 + GIPNSISI Sbjct: 827 GLTFRGIPNSISI 839
>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)| Length = 861 Score = 50.1 bits (118), Expect = 1e-06 Identities = 28/72 (38%), Positives = 41/72 (56%) Frame = -3 Query: 357 WTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKM 178 WT D +AF++F +I +++ + NND +NRHG +PY LL PS ++ Sbjct: 795 WTSDKRALEAFKKFGNKLAEIEKKLTQRNNDEKLRNRHGPVEMPYTLLYPS-----SKEG 849 Query: 177 VMEMGIPNSISI 142 + GIPNSISI Sbjct: 850 LTFRGIPNSISI 861
>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)| Length = 865 Score = 50.1 bits (118), Expect = 1e-06 Identities = 29/72 (40%), Positives = 37/72 (51%) Frame = -3 Query: 357 WTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKM 178 WT D QAF++F ++I E++ NND NR G +PY LL P+ T Sbjct: 800 WTSDSKALQAFQKFGNKLKEIEEKLARKNNDQSLSNRLGPVQLPYTLLHPNSEGLTCR-- 857 Query: 177 VMEMGIPNSISI 142 GIPNSISI Sbjct: 858 ----GIPNSISI 865
>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)| Length = 853 Score = 49.3 bits (116), Expect = 2e-06 Identities = 28/72 (38%), Positives = 40/72 (55%) Frame = -3 Query: 357 WTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKM 178 WT D +AF+ F + +I +++ E N D +NR+G +PY LL PS E+ Sbjct: 787 WTSDAGPLEAFKRFGKKLEEIEKKLIEKNKDETLRNRYGPAKMPYTLLYPS-----SEEG 841 Query: 177 VMEMGIPNSISI 142 + GIPNSISI Sbjct: 842 LTFRGIPNSISI 853
>LOXC2_ORYSA (Q84YK8) Probable lipoxygenase 8, chloroplast precursor (EC| 1.13.11.12) Length = 941 Score = 49.3 bits (116), Expect = 2e-06 Identities = 29/73 (39%), Positives = 38/73 (52%), Gaps = 1/73 (1%) Frame = -3 Query: 357 WTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRP-SDGDPTDEK 181 W D + A+ F ++I +D N D KNR GAG++PY L++P SD T Sbjct: 875 WNSDAAVQAAYAGFTARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKPFSDAGVTG-- 932 Query: 180 MVMEMGIPNSISI 142 MGIPNS SI Sbjct: 933 ----MGIPNSTSI 941
>LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12)| Length = 918 Score = 48.9 bits (115), Expect = 3e-06 Identities = 30/72 (41%), Positives = 36/72 (50%) Frame = -3 Query: 357 WTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKM 178 WT D A F R+ E ++ N D RKNR GAG++PY LL PS Sbjct: 852 WTADEAAVAAHGMFAADVRRAEETIERRNADHGRKNRCGAGVLPYELLAPS-----SPPG 906 Query: 177 VMEMGIPNSISI 142 V G+PNSISI Sbjct: 907 VTCRGVPNSISI 918
>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)| Length = 864 Score = 48.5 bits (114), Expect = 4e-06 Identities = 28/72 (38%), Positives = 38/72 (52%) Frame = -3 Query: 357 WTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKM 178 WT D QAF++F +I ++ NNDP +R G +PY LL PS ++ Sbjct: 798 WTSDSKALQAFQKFGNKLAEIEAKLTNKNNDPSLYHRVGPVQLPYTLLHPS-----SKEG 852 Query: 177 VMEMGIPNSISI 142 + GIPNSISI Sbjct: 853 LTFRGIPNSISI 864
>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)| Length = 857 Score = 47.4 bits (111), Expect = 9e-06 Identities = 28/72 (38%), Positives = 38/72 (52%) Frame = -3 Query: 357 WTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKM 178 WT D +AF+ F +I ++ E NND +NR G +PY LL PS ++ Sbjct: 791 WTSDTRALEAFKRFGNKLAQIENKLSERNNDEKLRNRCGPVQMPYTLLLPS-----SKEG 845 Query: 177 VMEMGIPNSISI 142 + GIPNSISI Sbjct: 846 LTFRGIPNSISI 857
>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)| Length = 863 Score = 47.0 bits (110), Expect = 1e-05 Identities = 28/73 (38%), Positives = 36/73 (49%), Gaps = 1/73 (1%) Frame = -3 Query: 357 WTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTD-EK 181 WT D +AF+ F +I +V N DP KNR G PY L+ P+ D + Sbjct: 791 WTSDPKALEAFKRFSRQLVEIESKVLNMNKDPLLKNRVGPANFPYTLMFPNTSDNKGAAE 850 Query: 180 MVMEMGIPNSISI 142 + GIPNSISI Sbjct: 851 GITARGIPNSISI 863
>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 45.1 bits (105), Expect = 4e-05 Identities = 25/72 (34%), Positives = 41/72 (56%) Frame = -3 Query: 357 WTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKM 178 WT + QAF+ F + ++I E++ N D +NR+G +PY +L P+ +++ Sbjct: 795 WTNNIKALQAFKRFGQKLKEIEEKIMGRNKDSSLRNRNGPVKMPYTVLLPT----CEDEG 850 Query: 177 VMEMGIPNSISI 142 + GIPNSISI Sbjct: 851 LTFRGIPNSISI 862
>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)| Length = 864 Score = 45.1 bits (105), Expect = 4e-05 Identities = 27/72 (37%), Positives = 37/72 (51%) Frame = -3 Query: 357 WTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKM 178 WT D +AF+ F I +++ N+DP +NR G +PY LL S E+ Sbjct: 798 WTTDKKALEAFKRFGSKLTGIEGKINARNSDPSLRNRTGPVQLPYTLLHRS-----SEEG 852 Query: 177 VMEMGIPNSISI 142 + GIPNSISI Sbjct: 853 LTFKGIPNSISI 864
>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)| Length = 859 Score = 44.7 bits (104), Expect = 6e-05 Identities = 29/72 (40%), Positives = 36/72 (50%) Frame = -3 Query: 357 WTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKM 178 WTKD AFE F + I ++ N+ KNR G VPY LL PT E+ Sbjct: 793 WTKDKEPLVAFERFGKMLSDIENRIMIMNSHKSWKNRSGPVNVPYTLL-----FPTSEEG 847 Query: 177 VMEMGIPNSISI 142 + GIPNS+SI Sbjct: 848 LTGKGIPNSVSI 859
>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)| Length = 861 Score = 43.5 bits (101), Expect = 1e-04 Identities = 28/72 (38%), Positives = 35/72 (48%) Frame = -3 Query: 357 WTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKM 178 WTKD AF+ F + I +Q+ + N D NR G PY LL PT E Sbjct: 795 WTKDKEPLAAFDRFGKKLTDIEKQIIQRNGDNILTNRSGPVNAPYTLL-----FPTSEGG 849 Query: 177 VMEMGIPNSISI 142 + GIPNS+SI Sbjct: 850 LTGKGIPNSVSI 861
>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)| Length = 860 Score = 42.0 bits (97), Expect = 4e-04 Identities = 28/72 (38%), Positives = 34/72 (47%) Frame = -3 Query: 357 WTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKM 178 WTKD AFE F I +Q+ + N + NR G PY LL PT E Sbjct: 794 WTKDKEPLAAFERFGNKLTDIEKQIMQRNGNNILTNRTGPVNAPYTLL-----FPTSEGG 848 Query: 177 VMEMGIPNSISI 142 + GIPNS+SI Sbjct: 849 LTGKGIPNSVSI 860
>LOXB_PHAVU (P27481) Lipoxygenase (EC 1.13.11.12) (Fragment)| Length = 741 Score = 40.0 bits (92), Expect = 0.001 Identities = 19/51 (37%), Positives = 29/51 (56%) Frame = -3 Query: 357 WTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPS 205 WT D +AF+ F + +I +++ + NND +NR G +PY LL PS Sbjct: 681 WTSDAGPLEAFKRFGKKLAEIEKKLVQKNNDETLRNRTGPAKMPYTLLYPS 731
>UREE_RHOS4 (Q3J156) Urease accessory protein ureE| Length = 182 Score = 31.6 bits (70), Expect = 0.50 Identities = 19/53 (35%), Positives = 25/53 (47%) Frame = -2 Query: 295 RGAGG*VEQRPRPEKPTRRRHGAVCAAQAVGR*SHGREDGDGDGHPQQHLHLS 137 RG G +E R P +P GA + +G HG G G HP H+H+S Sbjct: 120 RGLGLTLEPRTEPFRP---EGGAYGHGRTLGH-DHGPAQGHGHDHPHVHVHIS 168
>MUTS_STRT2 (Q5M6I1) DNA mismatch repair protein mutS| Length = 852 Score = 30.4 bits (67), Expect = 1.1 Identities = 12/41 (29%), Positives = 22/41 (53%) Frame = -3 Query: 354 TKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGM 232 T+ G+I F+E + RK++ + W D + K R +G+ Sbjct: 407 TEGGIIRDGFDETLDKYRKVMSEGTSWIADIEAKEREASGI 447
>MUTS_STRT1 (Q5M1Z0) DNA mismatch repair protein mutS| Length = 852 Score = 30.4 bits (67), Expect = 1.1 Identities = 12/41 (29%), Positives = 22/41 (53%) Frame = -3 Query: 354 TKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGM 232 T+ G+I F+E + RK++ + W D + K R +G+ Sbjct: 407 TEGGIIRDGFDETLDKYRKVMSEGTSWIADIEAKEREASGI 447
>CELR2_MOUSE (Q9R0M0) Cadherin EGF LAG seven-pass G-type receptor 2 precursor| (Flamingo 1) (mFmi1) Length = 2920 Score = 29.3 bits (64), Expect = 2.5 Identities = 13/39 (33%), Positives = 18/39 (46%) Frame = +2 Query: 227 GTMPAPCRFFRSGSLFHSSTCSTIFLVLSLNSSNAWLIT 343 G PCR SG S C+ + + ++SN WL T Sbjct: 31 GDQVGPCRSLGSGGRSSSGACAPVGWLCPASASNLWLYT 69
>ASPA_PROMM (Q7V5L6) Probable aspartoacylase (EC 3.5.1.15)| Length = 304 Score = 28.9 bits (63), Expect = 3.2 Identities = 9/22 (40%), Positives = 15/22 (68%) Frame = -3 Query: 285 VDEWNNDPDRKNRHGAGMVPYV 220 +D+W+ P+ N HG G+VP + Sbjct: 23 LDQWSQTPELINTHGVGVVPVI 44
>Y463_CHRVO (Q7P0V2) UPF0341 protein CV_0463| Length = 258 Score = 28.5 bits (62), Expect = 4.2 Identities = 16/35 (45%), Positives = 17/35 (48%) Frame = -2 Query: 262 RPEKPTRRRHGAVCAAQAVGR*SHGREDGDGDGHP 158 R E T +HGAV A G H RE G G G P Sbjct: 45 RLELLTTGKHGAVYAEFVEGAARHRREQGGGRGQP 79
>MUTS_NEIMB (Q9JX94) DNA mismatch repair protein mutS| Length = 864 Score = 28.5 bits (62), Expect = 4.2 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%) Frame = -3 Query: 357 WTKDG-VINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGM 232 W KDG VIN F + R+I DE+ D + K R G+ Sbjct: 412 WLKDGNVINHGFHPELDELRRIQNHGDEFLLDLEAKERERTGL 454
>MUTS_NEIMA (Q9JWT7) DNA mismatch repair protein mutS| Length = 864 Score = 28.5 bits (62), Expect = 4.2 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%) Frame = -3 Query: 357 WTKDG-VINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGM 232 W KDG VIN F + R+I DE+ D + K R G+ Sbjct: 412 WLKDGNVINHGFHPELDELRRIQNHGDEFLLDLEAKERERTGL 454
>MUTS_NEIG1 (Q5F5J4) DNA mismatch repair protein mutS| Length = 864 Score = 28.5 bits (62), Expect = 4.2 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%) Frame = -3 Query: 357 WTKDG-VINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGM 232 W KDG VIN F + R+I DE+ D + K R G+ Sbjct: 412 WLKDGNVINHGFHPELDELRRIQNHGDEFLLDLEAKERERTGL 454
>ACDE2_METTE (Q9C4Z3) Acetyl-CoA decarbonylase/synthase complex epsilon subunit| 2 (ACDS complex epsilon subunit 2) Length = 170 Score = 27.7 bits (60), Expect = 7.2 Identities = 12/23 (52%), Positives = 13/23 (56%) Frame = -3 Query: 78 WPGGGYNGNEHQIIIKGHDDIYI 10 WPG NGN II+ GH YI Sbjct: 99 WPGLDGNGNYDTIILLGHKKYYI 121
>SM50_STRPU (P11994) 50 kDa spicule matrix protein precursor| Length = 445 Score = 27.7 bits (60), Expect = 7.2 Identities = 12/27 (44%), Positives = 14/27 (51%) Frame = -2 Query: 361 GMDKGWGDQPGI*GVQGEHQEDRGAGG 281 G GWG+QPG+ G Q G GG Sbjct: 270 GQQPGWGNQPGVGGRQPGMGGQPGVGG 296
>DEFR7_MOUSE (P50715) Defensin-related cryptdin, related sequence 7 precursor| (Cryptdin-related protein 4C-2) (CRS4C) Length = 91 Score = 27.7 bits (60), Expect = 7.2 Identities = 12/22 (54%), Positives = 12/22 (54%) Frame = +3 Query: 267 RCSTHPPAPRSSWCSP*TPQMP 332 RC PP PR SWC P P P Sbjct: 64 RCPRCPPCPRCSWC-PRCPTCP 84
>TSGA_BUCAI (P57601) Protein tsgA homolog| Length = 388 Score = 27.3 bits (59), Expect = 9.4 Identities = 10/23 (43%), Positives = 16/23 (69%) Frame = -3 Query: 339 INQAFEEFKESTRKIVEQVDEWN 271 IN +FE+FK +T+ E ++WN Sbjct: 181 INSSFEKFKTNTKNSKETKEKWN 203
>COAT_PAVHB (P07299) Probable coat protein VP1| Length = 781 Score = 27.3 bits (59), Expect = 9.4 Identities = 16/41 (39%), Positives = 19/41 (46%) Frame = -3 Query: 318 FKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGD 196 FK RK + WN P H AG +PYVL P+ D Sbjct: 719 FKLGPRKATGR---WNPQPGVYPPHAAGHLPYVLYDPTATD 756
>EDG8_HUMAN (Q9H228) Sphingosine 1-phosphate receptor Edg-8 (Endothelial| differentiation sphingolipid G-protein-coupled receptor 8) (Sphingosine 1-phosphate receptor 5) (S1P5) Length = 398 Score = 27.3 bits (59), Expect = 9.4 Identities = 16/32 (50%), Positives = 19/32 (59%) Frame = +1 Query: 40 NLVLIPIIPTAGPRD*RHSYLRLVELHTHTQG 135 N +L PII T RD RH+ LRLV H+ G Sbjct: 298 NSLLNPIIYTLTNRDLRHALLRLVCCGRHSCG 329 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 60,332,612 Number of Sequences: 219361 Number of extensions: 1240679 Number of successful extensions: 3621 Number of sequences better than 10.0: 42 Number of HSP's better than 10.0 without gapping: 3454 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3596 length of database: 80,573,946 effective HSP length: 96 effective length of database: 59,515,290 effective search space used: 1428366960 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
