Clone Name | rbastl23b07 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | AEF1_DROME (P39413) Adult enhancer factor 1 (AEF-1) | 30 | 2.3 | 2 | DHET_GLUOX (O05542) Alcohol dehydrogenase [acceptor] precursor (... | 28 | 6.5 | 3 | VG10_BPB03 (Q37891) Upper collar protein (Connector protein) (La... | 28 | 8.6 |
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>AEF1_DROME (P39413) Adult enhancer factor 1 (AEF-1)| Length = 308 Score = 29.6 bits (65), Expect = 2.3 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Frame = +1 Query: 10 TQIDENCTSLIANARPKTKEDIFQHICTDNNH*GVL*G-HPGYNPATQKLQEQMNHRRRR 186 T + NC +I A+P+T I +NN+ V HP + A Q+ Q+Q ++++ Sbjct: 15 TAMSSNCDIVIVAAQPQTT------IANNNNNETVTQATHPAHMAAVQQQQQQQQQQQQQ 68 Query: 187 QH 192 H Sbjct: 69 HH 70
>DHET_GLUOX (O05542) Alcohol dehydrogenase [acceptor] precursor (EC 1.1.99.8)| (G3-ADH subunit I) Length = 757 Score = 28.1 bits (61), Expect = 6.5 Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 5/52 (9%) Frame = -2 Query: 160 LVTFALRGYIRDAPITLPSDYYQYICV-----GIYPLLFWAERLQSSWYSSH 20 L +F + I P+T ++ QY+ V GIYP L+ S W +H Sbjct: 555 LYSFPAQSAIIAPPVTYTANGKQYVAVEVGWGGIYPFLYGGVARTSGWTVNH 606
>VG10_BPB03 (Q37891) Upper collar protein (Connector protein) (Late protein| GP10) Length = 308 Score = 27.7 bits (60), Expect = 8.6 Identities = 15/33 (45%), Positives = 18/33 (54%) Frame = -2 Query: 100 YYQYICVGIYPLLFWAERLQSSWYSSHQSEFIH 2 YYQY+C Y L W ERL S S+ + IH Sbjct: 26 YYQYLCSLAYQLFEW-ERLPPSVDPSYLEKSIH 57 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 31,432,630 Number of Sequences: 219361 Number of extensions: 567313 Number of successful extensions: 1466 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 1450 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1466 length of database: 80,573,946 effective HSP length: 44 effective length of database: 70,922,062 effective search space used: 1702129488 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)