ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl23b02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1BC11B_HUMAN (Q9C0K0) B-cell lymphoma/leukemia 11B (B-cell CLL/ly... 31 1.1
2AXL1_YEAST (P40851) Putative protease AXL1 (EC 3.4.99.-) 28 5.4

>BC11B_HUMAN (Q9C0K0) B-cell lymphoma/leukemia 11B (B-cell CLL/lymphoma 11B)|
           (Radiation-induced tumor suppressor gene 1 protein)
           (hRit1) (COUP-TF-interacting protein 2)
          Length = 894

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +3

Query: 24  LPPCL*MPCCNVSRYVQNGLKGNLLTLRPF 113
           LPPCL +PCC+      +G +G   T  PF
Sbjct: 177 LPPCLPLPCCSARPVSGDGTQGEGQTEAPF 206



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>AXL1_YEAST (P40851) Putative protease AXL1 (EC 3.4.99.-)|
          Length = 1208

 Score = 28.5 bits (62), Expect = 5.4
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = +3

Query: 3   YSTGNTMLPPCL*MPCCNVSRYVQNGLKGNLLTLRPFQVLDRPS 134
           + TGN  LP C+  P      +++  LK    TLRP Q+   P+
Sbjct: 574 FPTGNLFLPDCVSDPLKLQQLFLECSLKSKFATLRP-QIYSEPT 616


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,751,361
Number of Sequences: 219361
Number of extensions: 304558
Number of successful extensions: 567
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 567
length of database: 80,573,946
effective HSP length: 21
effective length of database: 75,967,365
effective search space used: 1823216760
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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