Clone Name | rbastl23b02 |
---|---|
Clone Library Name | barley_pub |
>gb|AC166325.1| Mus musculus BAC clone RP24-421O23 from chromosome 13, complete sequence Length = 192167 Score = 42.1 bits (21), Expect = 0.42 Identities = 21/21 (100%) Strand = Plus / Plus Query: 14 aaacacaatgttaccaccatg 34 ||||||||||||||||||||| Sbjct: 56882 aaacacaatgttaccaccatg 56902
>gb|AC154603.3| Mus musculus BAC clone RP23-344D21 from chromosome 13, complete sequence Length = 216297 Score = 42.1 bits (21), Expect = 0.42 Identities = 21/21 (100%) Strand = Plus / Minus Query: 14 aaacacaatgttaccaccatg 34 ||||||||||||||||||||| Sbjct: 2001 aaacacaatgttaccaccatg 1981
>gb|AC153609.2| Mus musculus 6 BAC RP23-77I23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 221782 Score = 38.2 bits (19), Expect = 6.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 107 gccattccaggtgcttgat 125 ||||||||||||||||||| Sbjct: 9298 gccattccaggtgcttgat 9316
>gb|CP000069.1| Trypanosoma brucei chromosome 6, complete sequence Length = 1618915 Score = 38.2 bits (19), Expect = 6.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 4 acagtacaggaaacacaatgtta 26 |||| |||||||||||||||||| Sbjct: 812323 acagaacaggaaacacaatgtta 812345
>gb|AC084047.3| Trypanosoma brucei chromosome 6 clone RPCI93-5F5, complete sequence Length = 152595 Score = 38.2 bits (19), Expect = 6.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 4 acagtacaggaaacacaatgtta 26 |||| |||||||||||||||||| Sbjct: 22048 acagaacaggaaacacaatgtta 22070
>emb|AL592503.5| Human DNA sequence from clone RP11-267A5 on chromosome 13, complete sequence Length = 99970 Score = 38.2 bits (19), Expect = 6.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 26 accaccatgcctctgaatg 44 ||||||||||||||||||| Sbjct: 99030 accaccatgcctctgaatg 99012
>emb|AL160255.14| Human DNA sequence from clone RP11-60N6 on chromosome 13 Contains the 5' end of a novel gene (KIAA0774), complete sequence Length = 172923 Score = 38.2 bits (19), Expect = 6.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 26 accaccatgcctctgaatg 44 ||||||||||||||||||| Sbjct: 1060 accaccatgcctctgaatg 1042
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 38.2 bits (19), Expect = 6.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 tccggccattccaggtgct 121 ||||||||||||||||||| Sbjct: 1699806 tccggccattccaggtgct 1699788
>emb|BX950870.7| Zebrafish DNA sequence from clone DKEY-242M17 in linkage group 6, complete sequence Length = 186279 Score = 38.2 bits (19), Expect = 6.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 33 tgcctctgaatgccatgtt 51 ||||||||||||||||||| Sbjct: 101462 tgcctctgaatgccatgtt 101480
>gb|AC005156.1|AC005156 Homo sapiens PAC clone RP5-1099C19 from 7q21-q22, complete sequence Length = 73899 Score = 38.2 bits (19), Expect = 6.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 11 aggaaacacaatgttacca 29 ||||||||||||||||||| Sbjct: 39711 aggaaacacaatgttacca 39729
>emb|BX000481.5| Zebrafish DNA sequence from clone CH211-13A4 in linkage group 5, complete sequence Length = 163926 Score = 38.2 bits (19), Expect = 6.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 1 gctacagtacaggaaacac 19 ||||||||||||||||||| Sbjct: 91095 gctacagtacaggaaacac 91077
>emb|AL954699.4| Zebrafish DNA sequence from clone CH211-264H3 in linkage group 5, complete sequence Length = 143013 Score = 38.2 bits (19), Expect = 6.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 1 gctacagtacaggaaacac 19 ||||||||||||||||||| Sbjct: 92834 gctacagtacaggaaacac 92816
>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica Length = 2303261 Score = 38.2 bits (19), Expect = 6.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 37 tctgaatgccatgttgtaa 55 ||||||||||||||||||| Sbjct: 1236164 tctgaatgccatgttgtaa 1236182
>emb|AL772194.6| Mouse DNA sequence from clone RP23-331M18 on chromosome 4, complete sequence Length = 176496 Score = 38.2 bits (19), Expect = 6.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cagtacaggaaacacaatg 23 ||||||||||||||||||| Sbjct: 37538 cagtacaggaaacacaatg 37556 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,299,950 Number of Sequences: 3902068 Number of extensions: 1299950 Number of successful extensions: 81573 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 14 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 81527 Number of HSP's gapped (non-prelim): 46 length of query: 139 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 118 effective length of database: 17,151,101,840 effective search space: 2023830017120 effective search space used: 2023830017120 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)