>Y2948_STRCO (Q9L1U6) UPF0301 protein SCO2948|
          Length = 193

 Score = 36.6 bits (83), Expect = 0.015
 Identities = 17/26 (65%), Positives = 19/26 (73%)
 Frame = -1

Query: 348 LWFFLGYAGRGYSQLFDELSEGAWHV 271
           L  F GYAG G  QL DEL+EGAW+V
Sbjct: 127 LRIFAGYAGWGPGQLEDELTEGAWYV 152

>BC11B_HUMAN (Q9C0K0) B-cell lymphoma/leukemia 11B (B-cell CLL/lymphoma 11B)|
           (Radiation-induced tumor suppressor gene 1 protein)
           (hRit1) (COUP-TF-interacting protein 2)
          Length = 894

 Score = 35.4 bits (80), Expect = 0.033
 Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
 Frame = +1

Query: 82  CREATLPKIPVASAGVKRYSTGNTM-------LPPCL*MPCCNVSRYVQNGLKGNLLTLR 240
           CR A LP +   +A    +S+  T        LPPCL +PCC+      +G +G   T  
Sbjct: 145 CRPAQLPAVAPIAASSHPHSSVITSPLRALGALPPCLPLPCCSARPVSGDGTQGEGQTEA 204

Query: 241 PF 246
           PF
Sbjct: 205 PF 206

>Y5129_STRAW (Q82D55) UPF0301 protein SAV5129|
          Length = 193

 Score = 35.4 bits (80), Expect = 0.033
 Identities = 17/26 (65%), Positives = 18/26 (69%)
 Frame = -1

Query: 348 LWFFLGYAGRGYSQLFDELSEGAWHV 271
           L  F GYAG G  QL DEL EGAW+V
Sbjct: 127 LRIFAGYAGWGPGQLEDELVEGAWYV 152

>KRA93_HUMAN (Q9BYQ3) Keratin-associated protein 9-3 (Keratin-associated protein|
           9.3) (Ultrahigh sulfur keratin-associated protein 9.3)
          Length = 159

 Score = 31.2 bits (69), Expect = 0.63
 Identities = 15/56 (26%), Positives = 20/56 (35%)
 Frame = +1

Query: 28  PTICAPKCAKTNSDQNNLCREATLPKIPVASAGVKRYSTGNTMLPPCL*MPCCNVS 195
           PT C   C +++S     CR        V   G    S G+    PC    CC  +
Sbjct: 83  PTCCGSSCGQSSSCAPVYCRRTCYHPTSVCLPGCLNQSCGSNCCQPCCRPACCETT 138

>MURB_PROMT (Q46I41) UDP-N-acetylenolpyruvoylglucosamine reductase (EC|
           1.1.1.158) (UDP-N-acetylmuramate dehydrogenase)
          Length = 291

 Score = 31.2 bits (69), Expect = 0.63
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -2

Query: 380 GSEWASNLPRTCGFSLATLVGATANCLMSYLK 285
           G EWA  +P T G ++    GA  +C+ SYL+
Sbjct: 110 GFEWAVGIPGTIGGAVVMNAGAQEHCISSYLE 141

>AXL1_YEAST (P40851) Putative protease AXL1 (EC 3.4.99.-)|
          Length = 1208

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = +1

Query: 136 YSTGNTMLPPCL*MPCCNVSRYVQNGLKGNLLTLRPFQVLDRPSTNMP 279
           + TGN  LP C+  P      +++  LK    TLRP Q+   P+   P
Sbjct: 574 FPTGNLFLPDCVSDPLKLQQLFLECSLKSKFATLRP-QIYSEPTRTKP 620

>Y2927_COREF (Q8FSW7) UPF0301 protein CE2927|
          Length = 201

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -1

Query: 354 EDLWFFLGYAGRGYSQLFDELSEGAWHVS 268
           E + FF GYA     QL DE+ +G W+V+
Sbjct: 133 EGMRFFAGYAEWAPGQLNDEIEQGDWYVA 161

>KRA94_HUMAN (Q9BYQ2) Keratin-associated protein 9-4 (Keratin-associated protein|
           9.4) (Ultrahigh sulfur keratin-associated protein 9.4)
          Length = 154

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 15/56 (26%), Positives = 20/56 (35%)
 Frame = +1

Query: 28  PTICAPKCAKTNSDQNNLCREATLPKIPVASAGVKRYSTGNTMLPPCL*MPCCNVS 195
           PT C   C +++S     CR        V   G    S G+    PC    CC  +
Sbjct: 83  PTCCGSSCDQSSSCAPVYCRRTCYYPTTVCLPGCLNQSCGSNCCQPCCRPACCETT 138

>BC11B_MOUSE (Q99PV8) B-cell lymphoma/leukemia 11B (B-cell CLL/lymphoma 11B)|
           (Radiation-induced tumor suppressor gene 1 protein)
           (mRit1) (COUP-TF-interacting protein 2)
          Length = 884

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 8/63 (12%)
 Frame = +1

Query: 82  CREATLPKI-PVASAGVKRYSTGNT-------MLPPCL*MPCCNVSRYVQNGLKGNLLTL 237
           CR A LP + P+A++     ++  T       +LPPC  +PCC       +G +G     
Sbjct: 144 CRPAQLPSMAPIAASSSHPPTSVITSPLRALGVLPPCFPLPCCGARPISGDGTQGEGQME 203

Query: 238 RPF 246
            PF
Sbjct: 204 APF 206

>KRA11_HUMAN (Q07627) Keratin-associated protein 1-1 (Keratin-associated protein|
           1.1) (High sulfur keratin-associated protein 1.1)
           (Keratin-associated protein 1.6) (Keratin-associated
           protein 1.7)
          Length = 177

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 16/55 (29%), Positives = 21/55 (38%), Gaps = 2/55 (3%)
 Frame = +1

Query: 37  CAPKCAKTNSDQNNLCREATLPK--IPVASAGVKRYSTGNTMLPPCL*MPCCNVS 195
           C P C +T+S Q   C  +         +  G   +STG T    C    CC  S
Sbjct: 25  CQPSCCETSSCQPRCCETSCCQPSCCQTSFCGFPSFSTGGTCDSSCCQPSCCETS 79

>ADH6_RAT (Q5XI95) Alcohol dehydrogenase 6 (EC 1.1.1.1)|
          Length = 376

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
 Frame = +1

Query: 34  ICAPKCAKTNS---DQNNLCREATLPKIPVASAGVKR 135
           +C P+C +  +    +NN+C E  L K  +AS G  R
Sbjct: 94  LCIPQCGECKTCLNSKNNICTEIRLSKTHLASEGTSR 130

>NIR_MAIZE (P17847) Ferredoxin--nitrite reductase, chloroplast precursor (EC|
           1.7.7.1) (Fragment)
          Length = 569

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
 Frame = +1

Query: 40  APKCAKTNSDQNNLCREATLPKIPVASAGVKRYSTGNTMLPPCL*MPCCNVSRYVQNGLK 219
           A  CA   + QN   R  TLP +P    G++  + G T L   +     NV   V N L 
Sbjct: 139 ADGCADVTTRQNWQIRGVTLPDVPAILDGLR--AVGLTSLQSGM----DNVRNPVGNPLA 192

Query: 220 GNLLTLRPFQVLD-RPSTNMPCSF 288
           G    + P +++D RP TN+  S+
Sbjct: 193 G----VDPHEIVDTRPYTNLLSSY 212

>CFAI_MOUSE (Q61129) Complement factor I precursor (EC 3.4.21.45) (C3B/C4B|
           inactivator) [Contains: Complement factor I heavy chain;
           Complement factor I light chain]
          Length = 603

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
 Frame = +2

Query: 68  IRTTCVEKLP--CPKFP*PRQALNATVQETQCYHHASEC 178
           I  TC+ KLP  CP+   P  A+N     T C+  + EC
Sbjct: 58  IEGTCICKLPYQCPRAGTPVCAMNGRSYPTYCHQKSFEC 96

>KRA98_HUMAN (Q9BYQ0) Keratin-associated protein 9-8 (Keratin-associated protein|
           9.8) (Ultrahigh sulfur keratin-associated protein 9.8)
          Length = 159

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 14/55 (25%), Positives = 20/55 (36%)
 Frame = +1

Query: 31  TICAPKCAKTNSDQNNLCREATLPKIPVASAGVKRYSTGNTMLPPCL*MPCCNVS 195
           T C   C +++S     CR        V   G    S G++   PC    CC  +
Sbjct: 84  TSCGSSCGQSSSCAPVYCRRTCYHPTTVCLPGCLNQSCGSSCCQPCCRPACCETT 138

>KRA99_HUMAN (Q9BYP9) Keratin-associated protein 9-9 (Keratin-associated protein|
           9.9) (Ultrahigh sulfur keratin-associated protein 9.9)
          Length = 154

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 14/55 (25%), Positives = 20/55 (36%)
 Frame = +1

Query: 31  TICAPKCAKTNSDQNNLCREATLPKIPVASAGVKRYSTGNTMLPPCL*MPCCNVS 195
           T C   C +++S     CR        V   G    S G++   PC    CC  +
Sbjct: 79  TSCGSSCGQSSSCAPVYCRRTCYYPTTVCLPGCLNQSCGSSCCQPCCRPACCETT 133

>KRA95_HUMAN (Q9BYQ1) Keratin-associated protein 9-5 (Keratin-associated protein|
           9.5) (Ultrahigh sulfur keratin-associated protein 9.5)
           (Fragment)
          Length = 111

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 14/55 (25%), Positives = 20/55 (36%)
 Frame = +1

Query: 31  TICAPKCAKTNSDQNNLCREATLPKIPVASAGVKRYSTGNTMLPPCL*MPCCNVS 195
           T C   C +++S     CR        V   G    S G++   PC    CC  +
Sbjct: 36  TSCGSSCGQSSSCAPVYCRRTCYYPTTVCLPGCLNQSCGSSCCQPCCRPACCETT 90

>Y3485_CHRVO (Q7NSE1) UPF0060 membrane protein CV_3485|
          Length = 113

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -2

Query: 374 EWASNLPRTCGFSLATLVGATANCLMSYLKEHGMLVEGRS 255
           EW + LPR  G  + T +     C + +L    +L EGRS
Sbjct: 2   EWLTGLPRVAGLFVLTALAEIVGCYLPWL----VLREGRS 37

>KRA92_HUMAN (Q9BYQ4) Keratin-associated protein 9-2 (Keratin-associated protein|
           9.2) (Ultrahigh sulfur keratin-associated protein 9.2)
          Length = 174

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 14/55 (25%), Positives = 19/55 (34%)
 Frame = +1

Query: 31  TICAPKCAKTNSDQNNLCREATLPKIPVASAGVKRYSTGNTMLPPCL*MPCCNVS 195
           T C   C +++S     CR        V   G    S G+    PC    CC  +
Sbjct: 99  TSCGSSCGQSSSCAPVYCRRTCYYPTTVCLPGCLNQSCGSNCCQPCCRPACCETT 153

>ADH6_PERMA (P41681) Alcohol dehydrogenase 6 (EC 1.1.1.1) (Alcohol|
           dehydrogenase 2) (ADH-2)
          Length = 375

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
 Frame = +1

Query: 34  ICAPKCAKTNS---DQNNLCREATLPKIPVASAGVKR 135
           +C P+C + N+    +NN+C+E  L    + S G  R
Sbjct: 94  LCLPQCGECNTCLNSKNNICKEVRLSGTHLTSEGNSR 130

>ITK_MOUSE (Q03526) Tyrosine-protein kinase ITK/TSK (EC 2.7.10.2)|
           (T-cell-specific kinase) (IL-2-inducible T-cell kinase)
           (Kinase EMT) (Kinase TLK)
          Length = 625

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
 Frame = +2

Query: 227 F*LSGHSRC---LIGPPLTCHAPSDSSSNSWL*PRPA*PRKNHRSSADCSPTLIPA 385
           F + G  RC   L  P + C AP D S N+   P P  P  N RS  +   TL+ A
Sbjct: 130 FWMDGRWRCCSQLEKPAVGC-APYDPSKNASKKPLPPTPEDNRRSFQEPEETLVIA 184

>Y3084_CORGL (Q8NL65) UPF0301 protein Cgl3084/cg3414|
          Length = 189

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -1

Query: 354 EDLWFFLGYAGRGYSQLFDELSEGAWHVS 268
           E + FF GYA     QL +E+ +G W V+
Sbjct: 121 EGMRFFAGYAEWAPGQLNEEIEQGDWFVT 149

>MSH6_DROME (Q9VUM0) Probable DNA mismatch repair protein MSH6|
          Length = 1190

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +1

Query: 178  PCCNVSRYVQNGLKGNLLTLRPFQVLDRPS 267
            PC N S Y+ NGL+    +  P  +L  P+
Sbjct: 931  PCANASTYIPNGLELGTASEAPLSLLTGPN 960


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,897,284
Number of Sequences: 219361
Number of extensions: 1306766
Number of successful extensions: 3126
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 3041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3125
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 1386249648
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)