Clone Information

BLAST Search Result

Clone Name	rbastl22h06
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	SUS1_HORVU (P31922) Sucrose synthase 1 (EC 2.4.1.13) (Sucrose-UD...	104	4e-23
2	SUS1_ORYSA (P30298) Sucrose synthase 1 (EC 2.4.1.13) (Sucrose-UD...	101	4e-22
3	SUS2_ORYSA (P31924) Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UD...	94	6e-20
4	SUS2_MAIZE (P49036) Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UD...	94	6e-20
5	SUS2_HORVU (P31923) Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UD...	93	1e-19
6	SUS2_TULGE (Q41607) Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UD...	93	2e-19
7	SUS1_MAIZE (P04712) Sucrose synthase 1 (EC 2.4.1.13) (Sucrose-UD...	91	9e-19
8	SUS3_ORYSA (Q43009) Sucrose synthase 3 (EC 2.4.1.13) (Sucrose-UD...	90	1e-18
9	SUS1_TULGE (Q41608) Sucrose synthase 1 (EC 2.4.1.13) (Sucrose-UD...	90	1e-18
10	SUSY_BETVU (Q42652) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP ...	86	3e-17
11	SUSY_PHAAU (Q01390) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP ...	86	3e-17
12	SUSY_SOYBN (P13708) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP ...	84	8e-17
13	SUSY_VICFA (P31926) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP ...	83	2e-16
14	SUSY_MEDSA (O65026) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP ...	83	2e-16
15	SUS2_ARATH (Q00917) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP ...	78	4e-15
16	SUS2_PEA (O24301) Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UDP ...	78	6e-15
17	SUS1_DAUCA (P49035) Sucrose synthase isoform I (EC 2.4.1.13) (Su...	77	1e-14
18	SUSY_ALNGL (P49034) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP ...	76	2e-14
19	SUS1_ARATH (P49040) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP ...	76	2e-14
20	SUS2_DAUCA (O49845) Sucrose synthase isoform II (EC 2.4.1.13) (S...	75	4e-14
21	SUSY_LYCES (P49037) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP ...	74	6e-14
22	SUS2_SOLTU (P49039) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP ...	73	1e-13
23	SUS1_SOLTU (P10691) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP ...	72	2e-13
24	SUSY_SACOF (P31925) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP ...	57	1e-08
25	TOP1_AERPE (Q9YB01) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoi...	30	1.0
26	SYY_NITWN (Q3SS12) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosin...	30	1.4
27	SDS3_MOUSE (Q8BR65) Sin3 histone deacetylase corepressor complex...	30	1.4
28	SDS3_HUMAN (Q9H7L9) Sin3 histone deacetylase corepressor complex...	30	1.4
29	GSPJ_VIBCH (P45776) General secretion pathway protein J precurso...	29	2.3
30	FCR1_CANAL (O93870) Fluconazole resistance protein 1	29	2.3
31	HSCC_ECOLI (P77319) Chaperone protein hscC (Hsc62)	29	3.0
32	CAD_DROME (P09085) Homeotic protein caudal	29	3.0
33	ZIPA_ECOLI (P77173) Cell division protein zipA	28	4.0
34	ZIPA_SHIFL (Q83QN9) Cell division protein zipA homolog	28	5.2
35	ZIPA_ECOL6 (Q8FFC0) Cell division protein zipA homolog	28	5.2
36	YTFB_ECOLI (P39310) Hypothetical protein ytfB	28	6.8
37	ZDH19_MOUSE (Q810M5) Probable palmitoyltransferase ZDHHC19 (EC 2...	28	6.8
38	SYY_RHILO (Q98NS5) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosin...	28	6.8
39	SYY_BRUSU (Q8G105) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosin...	28	6.8
40	SYY_BRUME (Q8YGV8) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosin...	28	6.8
41	SYY_BRUAB (Q57DI5) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosin...	28	6.8
42	SYY_BRUA2 (Q2YNR0) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosin...	28	6.8
43	PNS1_DEBHA (Q6BIV4) Protein PNS1	28	6.8
44	COBQ_VIBF1 (Q5E0T7) Cobyric acid synthase	28	6.8
45	ZDH19_HUMAN (Q8WVZ1) Probable palmitoyltransferase ZDHHC19 (EC 2...	28	6.8
46	POLN_SLDV (Q8QL53) Nonstructural polyprotein (Polyprotein nsP123...	28	6.8
47	MYLIP_BRARE (Q6TEM9) Ubiquitin ligase MYLIP (EC 6.3.2.-) (Myosin...	27	8.9
48	SYY_RHIME (Q92PK5) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosin...	27	8.9
49	SYY_AGRT5 (Q8UED2) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosin...	27	8.9
50	FOXN1_HUMAN (O15353) Forkhead box protein N1 (Transcription fact...	27	8.9
51	ARGJ_CARHZ (Q3A9W1) Arginine biosynthesis bifunctional protein a...	27	8.9

>SUS1_HORVU (P31922) Sucrose synthase 1 (EC 2.4.1.13) (Sucrose-UDP|
           glucosyltransferase 1)
          Length = 807

 Score =  104 bits (260), Expect = 4e-23
 Identities = 51/51 (100%), Positives = 51/51 (100%)
 Frame = -3

Query: 406 RLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVDGESS 254
           RLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVDGESS
Sbjct: 755 RLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVDGESS 805

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>SUS1_ORYSA (P30298) Sucrose synthase 1 (EC 2.4.1.13) (Sucrose-UDP|
           glucosyltransferase 1)
          Length = 808

 Score =  101 bits (252), Expect = 4e-22
 Identities = 48/51 (94%), Positives = 51/51 (100%)
 Frame = -3

Query: 406 RLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVDGESS 254
           RLMTLTGVYGFWKYVSNLERRETRRY+EMFYALKYRSLA+AVPLAVDGES+
Sbjct: 756 RLMTLTGVYGFWKYVSNLERRETRRYIEMFYALKYRSLASAVPLAVDGEST 806

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>SUS2_ORYSA (P31924) Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UDP|
           glucosyltransferase 2)
          Length = 816

 Score = 94.4 bits (233), Expect = 6e-20
 Identities = 44/51 (86%), Positives = 48/51 (94%)
 Frame = -3

Query: 406 RLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVDGESS 254
           RLMTLTGVYGFWKYVSNLERRETRRYLEM YALKYR++A+ VPLAV+GE S
Sbjct: 764 RLMTLTGVYGFWKYVSNLERRETRRYLEMLYALKYRTMASTVPLAVEGEPS 814

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>SUS2_MAIZE (P49036) Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UDP|
           glucosyltransferase 2)
          Length = 816

 Score = 94.4 bits (233), Expect = 6e-20
 Identities = 44/51 (86%), Positives = 48/51 (94%)
 Frame = -3

Query: 406 RLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVDGESS 254
           RLMTLTGVYGFWKYVSNLERRETRRYLEM YALKYR++A+ VPLAV+GE S
Sbjct: 764 RLMTLTGVYGFWKYVSNLERRETRRYLEMLYALKYRTMASTVPLAVEGEPS 814

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>SUS2_HORVU (P31923) Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UDP|
           glucosyltransferase 2)
          Length = 816

 Score = 93.2 bits (230), Expect = 1e-19
 Identities = 43/51 (84%), Positives = 48/51 (94%)
 Frame = -3

Query: 406 RLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVDGESS 254
           RLMTL+GVYGFWKYVSNL+RRETRRYLEM YALKYR +AA VPLAV+GE+S
Sbjct: 764 RLMTLSGVYGFWKYVSNLDRRETRRYLEMLYALKYRKMAATVPLAVEGETS 814

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>SUS2_TULGE (Q41607) Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UDP|
           glucosyltransferase 2)
          Length = 820

 Score = 92.8 bits (229), Expect = 2e-19
 Identities = 42/51 (82%), Positives = 49/51 (96%)
 Frame = -3

Query: 406 RLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVDGESS 254
           RL+TL GVYGFWKYVSNL+RRET+RYLEMFYALKYR+LA +VPLAVDGE++
Sbjct: 760 RLLTLAGVYGFWKYVSNLDRRETKRYLEMFYALKYRNLAKSVPLAVDGEAA 810

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>SUS1_MAIZE (P04712) Sucrose synthase 1 (EC 2.4.1.13) (Sucrose-UDP|
           glucosyltransferase 1) (Shrunken-1)
          Length = 802

 Score = 90.5 bits (223), Expect = 9e-19
 Identities = 42/47 (89%), Positives = 45/47 (95%)
 Frame = -3

Query: 406 RLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 266
           RLMTLTGVYGFWKYVSNLERRETRRY+EMFYALKYRSLA+ VPL+ D
Sbjct: 756 RLMTLTGVYGFWKYVSNLERRETRRYIEMFYALKYRSLASQVPLSFD 802

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>SUS3_ORYSA (Q43009) Sucrose synthase 3 (EC 2.4.1.13) (Sucrose-UDP|
           glucosyltransferase 3)
          Length = 816

 Score = 90.1 bits (222), Expect = 1e-18
 Identities = 40/51 (78%), Positives = 47/51 (92%)
 Frame = -3

Query: 406 RLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVDGESS 254
           RLMTL+GVYGFWKYV+NL+RRETRRYLEM YALKYR +A  VPLA++GE+S
Sbjct: 764 RLMTLSGVYGFWKYVTNLDRRETRRYLEMLYALKYRKMATTVPLAIEGEAS 814

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>SUS1_TULGE (Q41608) Sucrose synthase 1 (EC 2.4.1.13) (Sucrose-UDP|
           glucosyltransferase 1)
          Length = 805

 Score = 89.7 bits (221), Expect = 1e-18
 Identities = 41/47 (87%), Positives = 45/47 (95%)
 Frame = -3

Query: 406 RLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 266
           RLMTL GVYGFWKYVSNL+RRETRRYLEMFYALKYR+LA +VPLA+D
Sbjct: 758 RLMTLAGVYGFWKYVSNLDRRETRRYLEMFYALKYRNLAKSVPLAID 804

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>SUSY_BETVU (Q42652) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP|
           glucosyltransferase) (Fragment)
          Length = 766

 Score = 85.5 bits (210), Expect = 3e-17
 Identities = 41/51 (80%), Positives = 43/51 (84%)
 Frame = -3

Query: 406 RLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVDGESS 254
           RLMTL GVYGFWKYVS LERRETRRYLEMFY LK+R LA +VPLA D E S
Sbjct: 705 RLMTLAGVYGFWKYVSKLERRETRRYLEMFYILKFRDLANSVPLATDEEPS 755

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>SUSY_PHAAU (Q01390) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP|
           glucosyltransferase)
          Length = 805

 Score = 85.5 bits (210), Expect = 3e-17
 Identities = 39/47 (82%), Positives = 45/47 (95%)
 Frame = -3

Query: 406 RLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 266
           RL+TLTGVYGFWK+VSNL+RRE+RRYLEMFYALKYR LA +VPLAV+
Sbjct: 759 RLLTLTGVYGFWKHVSNLDRRESRRYLEMFYALKYRKLAESVPLAVE 805

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>SUSY_SOYBN (P13708) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP|
           glucosyltransferase) (Nodulin-100)
          Length = 805

 Score = 84.0 bits (206), Expect = 8e-17
 Identities = 38/47 (80%), Positives = 44/47 (93%)
 Frame = -3

Query: 406 RLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 266
           RL+TLTGVYGFWK+VSNL+RRE+RRYLEMFYALKYR LA +VPLA +
Sbjct: 759 RLLTLTGVYGFWKHVSNLDRRESRRYLEMFYALKYRKLAESVPLAAE 805

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>SUSY_VICFA (P31926) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP|
           glucosyltransferase)
          Length = 806

 Score = 82.8 bits (203), Expect = 2e-16
 Identities = 38/47 (80%), Positives = 44/47 (93%)
 Frame = -3

Query: 406 RLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 266
           RL+TLTGVYGFWK+VSNL+R E+RRYLEMFYALKYR LA +VPLAV+
Sbjct: 759 RLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 805

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>SUSY_MEDSA (O65026) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP|
           glucosyltransferase)
          Length = 805

 Score = 82.8 bits (203), Expect = 2e-16
 Identities = 38/47 (80%), Positives = 44/47 (93%)
 Frame = -3

Query: 406 RLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 266
           RL+TLTGVYGFWK+VSNL+R E+RRYLEMFYALKYR LA +VPLAV+
Sbjct: 759 RLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 805

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>SUS2_ARATH (Q00917) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP|
           glucosyltransferase)
          Length = 805

 Score = 78.2 bits (191), Expect = 4e-15
 Identities = 35/47 (74%), Positives = 41/47 (87%)
 Frame = -3

Query: 406 RLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 266
           RL+TL GVY FWK+VS LERRETRRYLEMFY+LK+R LA ++PLA D
Sbjct: 757 RLLTLAGVYAFWKHVSKLERRETRRYLEMFYSLKFRDLANSIPLATD 803

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>SUS2_PEA (O24301) Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UDP|
           glucosyltransferase 2)
          Length = 809

 Score = 77.8 bits (190), Expect = 6e-15
 Identities = 36/45 (80%), Positives = 39/45 (86%)
 Frame = -3

Query: 406 RLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLA 272
           RLMTL GVY FWKYVS LERRETRRYLEMFY LK+R LA +VP+A
Sbjct: 763 RLMTLAGVYSFWKYVSKLERRETRRYLEMFYILKFRDLANSVPIA 807

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>SUS1_DAUCA (P49035) Sucrose synthase isoform I (EC 2.4.1.13) (Sucrose-UDP|
           glucosyltransferase 1) (Susy*Dc1)
          Length = 808

 Score = 77.0 bits (188), Expect = 1e-14
 Identities = 36/47 (76%), Positives = 40/47 (85%)
 Frame = -3

Query: 406 RLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 266
           RL+TL GVYGFWK+VS L+R E RRYLEMFYALKYR LA +VPLA D
Sbjct: 761 RLLTLAGVYGFWKHVSKLDRLEIRRYLEMFYALKYRKLAESVPLAKD 807

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>SUSY_ALNGL (P49034) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP|
           glucosyltransferase)
          Length = 803

 Score = 76.3 bits (186), Expect = 2e-14
 Identities = 35/47 (74%), Positives = 42/47 (89%)
 Frame = -3

Query: 406 RLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 266
           RL+TLTGV  FWK+VSNL+R E+RRY+EMFYALKYR LA +VPLAV+
Sbjct: 757 RLLTLTGVTAFWKHVSNLDRLESRRYIEMFYALKYRKLAESVPLAVE 803

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>SUS1_ARATH (P49040) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP|
           glucosyltransferase)
          Length = 806

 Score = 76.3 bits (186), Expect = 2e-14
 Identities = 38/47 (80%), Positives = 41/47 (87%)
 Frame = -3

Query: 406 RLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 266
           RL+TLTGVYGFWK+VSNL+R E RRYLEMFYALKYR L  AVPLA D
Sbjct: 761 RLLTLTGVYGFWKHVSNLDRLEARRYLEMFYALKYRPL--AVPLAQD 805

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>SUS2_DAUCA (O49845) Sucrose synthase isoform II (EC 2.4.1.13) (Sucrose-UDP|
           glucosyltransferase 2) (Susy*Dc2)
          Length = 801

 Score = 75.1 bits (183), Expect = 4e-14
 Identities = 36/47 (76%), Positives = 41/47 (87%)
 Frame = -3

Query: 406 RLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 266
           RL+TL GVYGFWK+VS L+R E RRYLEMF ALKYR+LA +VPLAVD
Sbjct: 755 RLLTLGGVYGFWKHVSKLDRIEIRRYLEMFCALKYRNLAESVPLAVD 801

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>SUSY_LYCES (P49037) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP|
           glucosyltransferase)
          Length = 805

 Score = 74.3 bits (181), Expect = 6e-14
 Identities = 34/47 (72%), Positives = 39/47 (82%)
 Frame = -3

Query: 406 RLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 266
           RL+TL  VYGFWK+VS L+R E RRYLEMFYALKYR +A AVPLA +
Sbjct: 759 RLLTLAAVYGFWKHVSKLDRLEIRRYLEMFYALKYRKMAEAVPLAAE 805

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>SUS2_SOLTU (P49039) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP|
           glucosyltransferase) (SS65)
          Length = 805

 Score = 73.2 bits (178), Expect = 1e-13
 Identities = 34/47 (72%), Positives = 39/47 (82%)
 Frame = -3

Query: 406 RLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 266
           RL+TL  VYGFWK+VS L+R E RRYLEMFYALK+R LA  VPLAV+
Sbjct: 759 RLLTLAAVYGFWKHVSKLDRLEIRRYLEMFYALKFRKLAQLVPLAVE 805

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>SUS1_SOLTU (P10691) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP|
           glucosyltransferase) (SS16)
          Length = 805

 Score = 72.4 bits (176), Expect = 2e-13
 Identities = 33/46 (71%), Positives = 38/46 (82%)
 Frame = -3

Query: 403 LMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 266
           L+TL  VYGFWK+VS L+R E RRYLEMFYALKYR +A AVPLA +
Sbjct: 760 LLTLAAVYGFWKHVSKLDRLEIRRYLEMFYALKYRKMAEAVPLAAE 805

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>SUSY_SACOF (P31925) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP|
           glucosyltransferase) (Fragment)
          Length = 218

 Score = 57.0 bits (136), Expect = 1e-08
 Identities = 26/35 (74%), Positives = 30/35 (85%)
 Frame = -3

Query: 406 RLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKY 302
           RLMTLTG YGFW YVS LER +T RY++MFYAL+Y
Sbjct: 184 RLMTLTGAYGFWNYVSKLERGDT-RYIDMFYALEY 217

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>TOP1_AERPE (Q9YB01) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)|
           (Omega-protein) (Relaxing enzyme) (Untwisting enzyme)
           (Swivelase)
          Length = 673

 Score = 30.4 bits (67), Expect = 1.0
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +1

Query: 49  GRRLFEAAGMNQQAALPKTSRMCRDIKSHTPRQTDQMKTTVDK 177
           GRR+  +AG  Q   L +  R  R+I  H P+ +  +K T +K
Sbjct: 183 GRRVILSAGRVQSPTLVEAYRRWREINLHVPKASVAVKITAEK 225

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>SYY_NITWN (Q3SS12) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA|
           ligase) (TyrRS)
          Length = 417

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = -3

Query: 397 TLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPL 275
           T+  VY +W+Y  N+E  +  R+L++F  L    +A    L
Sbjct: 250 TMLPVYDYWQYWRNVEDADVGRFLKLFTILPMGEIAKLAAL 290

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>SDS3_MOUSE (Q8BR65) Sin3 histone deacetylase corepressor complex component|
           SDS3 (Suppressor of defective silencing 3 protein
           homolog)
          Length = 328

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
 Frame = +2

Query: 122 TSNRTPHDRQTK*KLR*TNHSAADTSPSRSMNAPSSCP----ESALVAAALAVDRQWNCS 289
           T  +   D +T  KL+     A+ +SP      P+  P    E+ +    L  D++W   
Sbjct: 212 TDEQIMEDLRTLNKLKSPKRPASPSSPEHLPATPAESPAQRFEARIEDGKLYYDKRWYHK 271

Query: 290 SQATVLESVEHLQVTASLA 346
           SQA  LES ++ +++  ++
Sbjct: 272 SQAIYLESKDNQKLSCVIS 290

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>SDS3_HUMAN (Q9H7L9) Sin3 histone deacetylase corepressor complex component|
           SDS3 (Suppressor of defective silencing 3 protein
           homolog)
          Length = 328

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
 Frame = +2

Query: 122 TSNRTPHDRQTK*KLR*TNHSAADTSPSRSMNAPSSCP----ESALVAAALAVDRQWNCS 289
           T  +   D +T  KL+     A+ +SP      P+  P    E+ +    L  D++W   
Sbjct: 212 TDEQIMEDLRTLNKLKSPKRPASPSSPEHLPATPAESPAQRFEARIEDGKLYYDKRWYHK 271

Query: 290 SQATVLESVEHLQVTASLA 346
           SQA  LES ++ +++  ++
Sbjct: 272 SQAIYLESKDNQKLSCVIS 290

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>GSPJ_VIBCH (P45776) General secretion pathway protein J precursor (Cholera|
           toxin secretion protein epsJ)
          Length = 221

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +3

Query: 24  SLMKDEHHGQAFIRGGWHEP 83
           SL+  + HG  F+R GWH P
Sbjct: 95  SLLDSDQHGLLFVRLGWHNP 114

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>FCR1_CANAL (O93870) Fluconazole resistance protein 1|
          Length = 517

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
 Frame = +3

Query: 6   RNIALNSLMKDEHHGQAFIRGGWHEPASSTAQDLTNVP-------RHQIAHPTTDRPNEN 164
           RN+  +S +  EH G+AFI      P +S  Q  T+ P       + ++  P++D  NE+
Sbjct: 178 RNLKSSSRLFAEHKGEAFI----GSPVTSPQQMPTSNPFRRTSMFKEELESPSSDHYNES 233

Query: 165 YGRQIIAQP 191
              Q + +P
Sbjct: 234 IFSQSVDEP 242

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>HSCC_ECOLI (P77319) Chaperone protein hscC (Hsc62)|
          Length = 556

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 17/60 (28%), Positives = 28/60 (46%)
 Frame = -2

Query: 182 YDLSTVVFIWSVCRGVCDLMSRHIREVLGSAACWFMPAASNKRLPVVFIFHQRVQCNVSL 3
           YD ST+V + +  +  C L S  I EV+ +  C +       R  V  IF   ++ N ++
Sbjct: 328 YDPSTIVALGAAIQAACRLRSEDIEEVILTDICPYSLGVEVNRQGVSGIFSPIIERNTTV 387

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>CAD_DROME (P09085) Homeotic protein caudal|
          Length = 427

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
 Frame = +3

Query: 42  HHGQAFIRGGWHEPASSTAQD-LTNVP--RHQI 131
           H   A   G WH PASSTA + + NVP   HQ+
Sbjct: 73  HSAAAASAGEWHSPASSTADNFVQNVPTSAHQL 105

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>ZIPA_ECOLI (P77173) Cell division protein zipA|
          Length = 328

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 20/70 (28%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
 Frame = +3

Query: 36  DEHHGQAFIRGGWHEPASSTAQDLTNV-PRHQIAHPTTDRPNENYGRQIIAQPTLHPPAR 212
           DE  G+  +    H PA++   +     P+HQ   P        Y      QP   PP  
Sbjct: 60  DEGVGEVRVHRVNHAPANAQEHEAARPSPQHQYQPP--------YASAQPRQPVQQPPEA 111

Query: 213 *MRPLHAPNP 242
            + P HAP+P
Sbjct: 112 QVPPQHAPHP 121

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>ZIPA_SHIFL (Q83QN9) Cell division protein zipA homolog|
          Length = 327

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 20/70 (28%), Positives = 27/70 (38%), Gaps = 1/70 (1%)
 Frame = +3

Query: 36  DEHHGQAFIRGGWHEPASSTAQDLTNV-PRHQIAHPTTDRPNENYGRQIIAQPTLHPPAR 212
           DE  G+  +    H PA++   +     P+HQ   P        Y      QP   PP  
Sbjct: 59  DEGVGEVRVHRVNHAPANAQEHEAARPSPQHQYLPP--------YASAQPRQPVQQPPEA 110

Query: 213 *MRPLHAPNP 242
            + P HAP P
Sbjct: 111 QVPPQHAPRP 120

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>ZIPA_ECOL6 (Q8FFC0) Cell division protein zipA homolog|
          Length = 332

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 20/70 (28%), Positives = 27/70 (38%), Gaps = 1/70 (1%)
 Frame = +3

Query: 36  DEHHGQAFIRGGWHEPASSTAQDLTNV-PRHQIAHPTTDRPNENYGRQIIAQPTLHPPAR 212
           DE  G+  +    H PA++   +     P+HQ   P        Y      QP   PP  
Sbjct: 60  DEGVGEVRVHRVNHAPANAQEHEAARPSPQHQYQPP--------YASAQPRQPVQQPPEA 111

Query: 213 *MRPLHAPNP 242
            + P HAP P
Sbjct: 112 QVPPQHAPRP 121

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>YTFB_ECOLI (P39310) Hypothetical protein ytfB|
          Length = 212

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 20/54 (37%), Positives = 24/54 (44%)
 Frame = +2

Query: 233 PESALVAAALAVDRQWNCSSQATVLESVEHLQVTASLAPLQVAHVLPEPIHTGQ 394
           P + +V     +D Q    SQ    E +    VT    P QVA V PEPI  GQ
Sbjct: 54  PNAPVVTREAQLDIQ--SQSQPPTEEQLRAQLVTPQNDPDQVAPVAPEPIQEGQ 105

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>ZDH19_MOUSE (Q810M5) Probable palmitoyltransferase ZDHHC19 (EC 2.3.1.-) (Zinc|
           finger DHHC domain-containing protein 19) (DHHC-19)
          Length = 347

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -3

Query: 73  QPPRINACPWCSSFIREFN 17
           +PPR   CPWC+  + +F+
Sbjct: 121 RPPRTYHCPWCNICVEDFD 139

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>SYY_RHILO (Q98NS5) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA|
           ligase) (TyrRS)
          Length = 417

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -3

Query: 382 YGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPL 275
           Y FW+Y  N E  +  R+L++F  L    +A    L
Sbjct: 255 YDFWQYWRNTEDADVERFLKIFTRLPLPEIARLAAL 290

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>SYY_BRUSU (Q8G105) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA|
           ligase) (TyrRS)
          Length = 417

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = -3

Query: 394 LTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPL 275
           +   Y FW+Y  N E  +  R+L+++  L    +A    L
Sbjct: 251 MLSAYDFWQYWRNTEDADVERFLKLYTTLPLDEIARLAEL 290

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>SYY_BRUME (Q8YGV8) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA|
           ligase) (TyrRS)
          Length = 417

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = -3

Query: 394 LTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPL 275
           +   Y FW+Y  N E  +  R+L+++  L    +A    L
Sbjct: 251 MLSAYDFWQYWRNTEDADVERFLKLYTTLPLDEIARLAEL 290

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>SYY_BRUAB (Q57DI5) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA|
           ligase) (TyrRS)
          Length = 417

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = -3

Query: 394 LTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPL 275
           +   Y FW+Y  N E  +  R+L+++  L    +A    L
Sbjct: 251 MLSAYDFWQYWRNTEDADVERFLKLYTTLPLDEIARLAEL 290

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>SYY_BRUA2 (Q2YNR0) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA|
           ligase) (TyrRS)
          Length = 417

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = -3

Query: 394 LTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPL 275
           +   Y FW+Y  N E  +  R+L+++  L    +A    L
Sbjct: 251 MLSAYDFWQYWRNTEDADVERFLKLYTTLPLDEIARLAEL 290

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>PNS1_DEBHA (Q6BIV4) Protein PNS1|
          Length = 513

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = -3

Query: 400 MTLTGVYGFWKYVSNLERRETR 335
           +T+ G+YG W Y+SN ++ E +
Sbjct: 278 ITIAGIYGTWYYLSNSDQGEPK 299

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>COBQ_VIBF1 (Q5E0T7) Cobyric acid synthase|
          Length = 495

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 18/61 (29%), Positives = 28/61 (45%)
 Frame = +3

Query: 6   RNIALNSLMKDEHHGQAFIRGGWHEPASSTAQDLTNVPRHQIAHPTTDRPNENYGRQIIA 185
           +N+ALNS + ++        GG    A +   D   V  H   +P   +PN + G Q+I 
Sbjct: 42  QNMALNSAVTED--------GGEIGRAQALQADAARVKPHVHMNPILLKPNTDIGAQVIV 93

Query: 186 Q 188
           Q
Sbjct: 94  Q 94

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>ZDH19_HUMAN (Q8WVZ1) Probable palmitoyltransferase ZDHHC19 (EC 2.3.1.-) (Zinc|
           finger DHHC domain-containing protein 19) (DHHC-19)
          Length = 282

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -3

Query: 73  QPPRINACPWCSSFIREFN 17
           +PPR   CPWC+  + +F+
Sbjct: 121 RPPRTYHCPWCNICVEDFD 139

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>POLN_SLDV (Q8QL53) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)|
            [Contains: P123; mRNA capping enzyme nsP1 (EC 2.1.1.-)
            (EC 2.7.7.-) (Nonstructural protein 1);
            Protease/triphosphatase/NTPase/helicase nsP2 (EC
            3.4.22.-) (EC 3.1.3.33) (EC 3.6.1.1
          Length = 2593

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 21/69 (30%), Positives = 28/69 (40%)
 Frame = +2

Query: 182  SAADTSPSRSMNAPSSCPESALVAAALAVDRQWNCSSQATVLESVEHLQVTASLAPLQVA 361
            S A T+ SR   AP S     L      V R    SSQ++V  S   +      AP+  A
Sbjct: 1780 SVAGTATSRRTPAPGSVQVRLLPPRDGTVSRSSRTSSQSSVTSSAGPIMPVPRRAPVAPA 1839

Query: 362  HVLPEPIHT 388
              L   +H+
Sbjct: 1840 ASLAGSVHS 1848

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>MYLIP_BRARE (Q6TEM9) Ubiquitin ligase MYLIP (EC 6.3.2.-) (Myosin regulatory|
           light chain-interacting protein) (MIR)
          Length = 472

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
 Frame = +2

Query: 230 CPESALVAAALAVDRQWNCSSQATVLESVEH--LQVTASLAPLQVAHVLPEPIHTG 391
           CP   +V       +  +C    + +E V+H  L    SL  L +    PEPIH G
Sbjct: 397 CPCGHMVCCQNCAAQLQSCPVCRSEVEHVQHVYLPTCTSLLNLTIGENSPEPIHRG 452

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>SYY_RHIME (Q92PK5) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA|
           ligase) (TyrRS)
          Length = 417

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -3

Query: 394 LTGVYGFWKYVSNLERRETRRYLEMFYAL 308
           + G Y FW+Y  N E  +  R+L+++  L
Sbjct: 251 MLGPYEFWQYWRNTEDADVARFLKLYTTL 279

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>SYY_AGRT5 (Q8UED2) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA|
           ligase) (TyrRS)
          Length = 417

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = -3

Query: 394 LTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPL 275
           L  VY FW+Y  N E  +  R+ ++F  L    +A    L
Sbjct: 251 LLPVYDFWQYWRNTEDADVVRFAKLFTTLPMDEIARIATL 290

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>FOXN1_HUMAN (O15353) Forkhead box protein N1 (Transcription factor winged-helix|
           nude)
          Length = 648

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = -2

Query: 374 LEVREQPGEARDSPLP 327
           LE+R QPG  +DSPLP
Sbjct: 479 LELRAQPGTPQDSPLP 494

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>ARGJ_CARHZ (Q3A9W1) Arginine biosynthesis bifunctional protein argJ [Includes:|
           Glutamate N-acetyltransferase (EC 2.3.1.35) (Ornithine
           acetyltransferase) (Ornithine transacetylase) (OATase);
           Amino-acid acetyltransferase (EC 2.3.1.1)
           (N-acetylglutamate syn
          Length = 399

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = -3

Query: 388 GVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVDGESS 254
           G+ G W     +E +E   YL+   AL+Y ++  A  +A DGE +
Sbjct: 235 GLSGVW-----VESKEEEAYLKFKNALEYVAICLAKAIARDGEGA 274


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,284,972
Number of Sequences: 219361
Number of extensions: 1067902
Number of successful extensions: 3224
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 2982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3114
length of database: 80,573,946
effective HSP length: 111
effective length of database: 56,224,875
effective search space used: 1349397000
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result