ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl22g01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SYS_STAES (Q8CU95) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--... 27 9.5
2SYS_STAEQ (Q5HK07) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--... 27 9.5

>SYS_STAES (Q8CU95) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)|
           (SerRS)
          Length = 428

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 10/24 (41%), Positives = 18/24 (75%)
 Frame = -3

Query: 329 PKEVAMKLAVRSDDPEVSDKIHEI 258
           P++V  K+ +R DDP+V D++ E+
Sbjct: 11  PEKVKSKIELRGDDPKVVDQVLEL 34



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>SYS_STAEQ (Q5HK07) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)|
           (SerRS)
          Length = 428

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 10/24 (41%), Positives = 18/24 (75%)
 Frame = -3

Query: 329 PKEVAMKLAVRSDDPEVSDKIHEI 258
           P++V  K+ +R DDP+V D++ E+
Sbjct: 11  PEKVKSKIELRGDDPKVVDQVLEL 34


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,697,176
Number of Sequences: 219361
Number of extensions: 706720
Number of successful extensions: 1585
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1585
length of database: 80,573,946
effective HSP length: 91
effective length of database: 60,612,095
effective search space used: 1454690280
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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