ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl22f12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_507492.1| PREDICTED Oryza sativa (japonica cultivar-group... 66 7e-08
2ref|XM_506853.2| PREDICTED Oryza sativa (japonica cultivar-group... 66 7e-08
3ref|XM_466588.1| Oryza sativa (japonica cultivar-group), mRNA 66 7e-08
4dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 66 7e-08
5dbj|AP005385.3| Oryza sativa (japonica cultivar-group) genomic D... 66 7e-08
6dbj|AP004124.3| Oryza sativa (japonica cultivar-group) genomic D... 66 7e-08
7dbj|AK121891.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 7e-08
8dbj|AK101873.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 7e-08
9dbj|AK099539.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 7e-08
10emb|CT025576.8| Mouse DNA sequence from clone RP23-286F8 on chro... 42 1.0
11emb|AL445216.6| Human DNA sequence from clone RP11-204N9 on chro... 42 1.0
12emb|AL133388.7| Human DNA sequence from clone RP1-257B21 on chro... 42 1.0
13dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.0
14gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.0
15emb|AL928758.3|CNS08CBV Oryza sativa chromosome 12, . BAC OSJNBb... 42 1.0
16emb|AL954632.3|CNS08CD0 Oryza sativa chromosome 12, . BAC OSJNBa... 42 1.0
17gb|AC152947.1| Mus musculus 10 BAC RP23-12H20 (Roswell Park Canc... 40 4.0
18gb|AC131079.11| Mus musculus chromosome 14, clone RP23-434L17, c... 40 4.0
19gb|AF346289.1|AF346288S2 Mus musculus GA-binding protein alpha-s... 40 4.0
20gb|AC140314.2| Mus musculus BAC clone RP23-395L3 from chromosome... 40 4.0
21gb|AC109271.10| Mus musculus chromosome 1, clone RP23-353I19, co... 40 4.0
22gb|AC084158.2| Caenorhabditis elegans cosmid Y69A2AR, complete s... 40 4.0
23gb|AC138312.3| Mus musculus BAC clone RP23-235K7 from chromosome... 40 4.0
24gb|AC122287.4| Mus musculus BAC clone RP23-253A15 from 1, comple... 40 4.0
25emb|AL109742.12|HSJ542O18 Human DNA sequence from clone RP4-542O... 40 4.0
26gb|AC164162.2| Mus musculus BAC clone RP23-253E17 from chromosom... 40 4.0
27gb|AC060798.10| Homo sapiens chromosome 17, clone RP11-615P24, c... 40 4.0
28gb|AC096575.1| Homo sapiens BAC clone RP11-521E5 from 4, complet... 40 4.0
29gb|AC092295.2| Homo sapiens chromosome 19 clone CTD-2630F21, com... 40 4.0
30dbj|AK162675.1| Mus musculus adult female vagina cDNA, RIKEN ful... 40 4.0
31dbj|AK053887.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN f... 40 4.0
32gb|AC155311.2| Mus musculus BAC clone RP23-407F7 from chromosome... 40 4.0
33gb|AC009243.3|AC009243 Genomic sequence for Arabidopsis thaliana... 40 4.0
34gb|AC009756.9|AC009756 Homo sapiens, clone RP11-45P2, complete s... 40 4.0
35dbj|AB012047.1| Arabidopsis thaliana gene for sulfate transporte... 40 4.0
36dbj|AB090812.1| Anopheles gambiae retrotransposon RTAg3 DNA, com... 40 4.0
37dbj|AP003679.2| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 4.0
38emb|AJ249412.1|MMU249412 Mus musculus partial PI3Kgamma gene for... 40 4.0
39emb|AL845292.4| Mouse DNA sequence from clone RP23-386I21 on chr... 40 4.0
40emb|AL772278.7| Mouse DNA sequence from clone RP23-416G5 on chro... 40 4.0 
>ref|XM_507492.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1791_B03.42-1
            mRNA
          Length = 3100

 Score = 65.9 bits (33), Expect = 7e-08
 Identities = 58/65 (89%), Gaps = 1/65 (1%)
 Strand = Plus / Minus

                                                                        
Query: 61   atgcccagcaagcaactaagcacttcctcgactacagcaaaatttgaatttacagcagga 120
            ||||||||||| ||||||  | ||||||| |||||| ||||||| |||||||||||||||
Sbjct: 3024 atgcccagcaaacaactat-cgcttcctccactacatcaaaattcgaatttacagcagga 2966

                 
Query: 121  agcaa 125
            |||||
Sbjct: 2965 agcaa 2961
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>ref|XM_506853.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1791_B03.42-1
            mRNA
          Length = 3189

 Score = 65.9 bits (33), Expect = 7e-08
 Identities = 58/65 (89%), Gaps = 1/65 (1%)
 Strand = Plus / Minus

                                                                        
Query: 61   atgcccagcaagcaactaagcacttcctcgactacagcaaaatttgaatttacagcagga 120
            ||||||||||| ||||||  | ||||||| |||||| ||||||| |||||||||||||||
Sbjct: 3025 atgcccagcaaacaactat-cgcttcctccactacatcaaaattcgaatttacagcagga 2967

                 
Query: 121  agcaa 125
            |||||
Sbjct: 2966 agcaa 2962
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>ref|XM_466588.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2915

 Score = 65.9 bits (33), Expect = 7e-08
 Identities = 58/65 (89%), Gaps = 1/65 (1%)
 Strand = Plus / Minus

                                                                        
Query: 61   atgcccagcaagcaactaagcacttcctcgactacagcaaaatttgaatttacagcagga 120
            ||||||||||| ||||||  | ||||||| |||||| ||||||| |||||||||||||||
Sbjct: 2751 atgcccagcaaacaactat-cgcttcctccactacatcaaaattcgaatttacagcagga 2693

                 
Query: 121  agcaa 125
            |||||
Sbjct: 2692 agcaa 2688
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 65.9 bits (33), Expect = 7e-08
 Identities = 58/65 (89%), Gaps = 1/65 (1%)
 Strand = Plus / Plus

                                                                            
Query: 61       atgcccagcaagcaactaagcacttcctcgactacagcaaaatttgaatttacagcagga 120
                ||||||||||| ||||||  | ||||||| |||||| ||||||| |||||||||||||||
Sbjct: 23568732 atgcccagcaaacaactat-cgcttcctccactacatcaaaattcgaatttacagcagga 23568790

                     
Query: 121      agcaa 125
                |||||
Sbjct: 23568791 agcaa 23568795
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>dbj|AP005385.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1791_B03
          Length = 166214

 Score = 65.9 bits (33), Expect = 7e-08
 Identities = 58/65 (89%), Gaps = 1/65 (1%)
 Strand = Plus / Plus

                                                                          
Query: 61     atgcccagcaagcaactaagcacttcctcgactacagcaaaatttgaatttacagcagga 120
              ||||||||||| ||||||  | ||||||| |||||| ||||||| |||||||||||||||
Sbjct: 134415 atgcccagcaaacaactat-cgcttcctccactacatcaaaattcgaatttacagcagga 134473

                   
Query: 121    agcaa 125
              |||||
Sbjct: 134474 agcaa 134478
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>dbj|AP004124.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1669_F01
          Length = 140019

 Score = 65.9 bits (33), Expect = 7e-08
 Identities = 58/65 (89%), Gaps = 1/65 (1%)
 Strand = Plus / Plus

                                                                        
Query: 61   atgcccagcaagcaactaagcacttcctcgactacagcaaaatttgaatttacagcagga 120
            ||||||||||| ||||||  | ||||||| |||||| ||||||| |||||||||||||||
Sbjct: 9832 atgcccagcaaacaactat-cgcttcctccactacatcaaaattcgaatttacagcagga 9890

                 
Query: 121  agcaa 125
            |||||
Sbjct: 9891 agcaa 9895
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>dbj|AK121891.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033105C13, full
            insert sequence
          Length = 3190

 Score = 65.9 bits (33), Expect = 7e-08
 Identities = 58/65 (89%), Gaps = 1/65 (1%)
 Strand = Plus / Minus

                                                                        
Query: 61   atgcccagcaagcaactaagcacttcctcgactacagcaaaatttgaatttacagcagga 120
            ||||||||||| ||||||  | ||||||| |||||| ||||||| |||||||||||||||
Sbjct: 3026 atgcccagcaaacaactat-cgcttcctccactacatcaaaattcgaatttacagcagga 2968

                 
Query: 121  agcaa 125
            |||||
Sbjct: 2967 agcaa 2963
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>dbj|AK101873.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070G06, full
            insert sequence
          Length = 2915

 Score = 65.9 bits (33), Expect = 7e-08
 Identities = 58/65 (89%), Gaps = 1/65 (1%)
 Strand = Plus / Minus

                                                                        
Query: 61   atgcccagcaagcaactaagcacttcctcgactacagcaaaatttgaatttacagcagga 120
            ||||||||||| ||||||  | ||||||| |||||| ||||||| |||||||||||||||
Sbjct: 2751 atgcccagcaaacaactat-cgcttcctccactacatcaaaattcgaatttacagcagga 2693

                 
Query: 121  agcaa 125
            |||||
Sbjct: 2692 agcaa 2688
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>dbj|AK099539.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013032G15, full
            insert sequence
          Length = 3101

 Score = 65.9 bits (33), Expect = 7e-08
 Identities = 58/65 (89%), Gaps = 1/65 (1%)
 Strand = Plus / Minus

                                                                        
Query: 61   atgcccagcaagcaactaagcacttcctcgactacagcaaaatttgaatttacagcagga 120
            ||||||||||| ||||||  | ||||||| |||||| ||||||| |||||||||||||||
Sbjct: 3025 atgcccagcaaacaactat-cgcttcctccactacatcaaaattcgaatttacagcagga 2967

                 
Query: 121  agcaa 125
            |||||
Sbjct: 2966 agcaa 2962
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>emb|CT025576.8| Mouse DNA sequence from clone RP23-286F8 on chromosome 16, complete
              sequence
          Length = 164971

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 123    caacaaaatatcacaaactgaaaag 147
              ||||||||||||| |||||||||||
Sbjct: 145220 caacaaaatatcataaactgaaaag 145196
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>emb|AL445216.6| Human DNA sequence from clone RP11-204N9 on chromosome 13 Contains the
             3' end of the PCDH17 gene for protocadherin 17 (PCH68
             PCDH68), complete sequence
          Length = 99292

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 134   cacaaactgaaaagagaagct 154
             |||||||||||||||||||||
Sbjct: 69707 cacaaactgaaaagagaagct 69727
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>emb|AL133388.7| Human DNA sequence from clone RP1-257B21 on chromosome 6q11.1-13
             Contains part of the COL19A1 gene for collagen XIX alpha 1
             and a ribosomal protein L37 (RPL37) pseudogene, complete
             sequence
          Length = 88428

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 123   caacaaaatatcacaaactga 143
             |||||||||||||||||||||
Sbjct: 79387 caacaaaatatcacaaactga 79407
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 127     aaaatatcacaaactgaaaagagaa 151
               |||||||||||||||||| ||||||
Sbjct: 2729877 aaaatatcacaaactgaacagagaa 2729853
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 127     aaaatatcacaaactgaaaagagaa 151
               |||||||||||||||||| ||||||
Sbjct: 2729821 aaaatatcacaaactgaacagagaa 2729797
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>emb|AL928758.3|CNS08CBV Oryza sativa chromosome 12, . BAC OSJNBb0075N21 of library OSJNBb from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 145539

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 127    aaaatatcacaaactgaaaagagaa 151
              |||||||||||||||||| ||||||
Sbjct: 140570 aaaatatcacaaactgaacagagaa 140594
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>emb|AL954632.3|CNS08CD0 Oryza sativa chromosome 12, . BAC OSJNBa0031E02 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 151878

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 127   aaaatatcacaaactgaaaagagaa 151
             |||||||||||||||||| ||||||
Sbjct: 98803 aaaatatcacaaactgaacagagaa 98779
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>gb|AC152947.1| Mus musculus 10 BAC RP23-12H20 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 222139

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 5     atcacatttgcacaagtttttcctgtta 32
             ||||||||| |||| |||||||||||||
Sbjct: 93063 atcacatttacacatgtttttcctgtta 93090
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>gb|AC131079.11| Mus musculus chromosome 14, clone RP23-434L17, complete sequence
          Length = 203276

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 123    caacaaaatatcacaaactgaaaa 146
              |||||| |||||||||||||||||
Sbjct: 134264 caacaacatatcacaaactgaaaa 134287
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>gb|AF346289.1|AF346288S2 Mus musculus GA-binding protein alpha-subunit (Gabpa) gene, exon 6
          Length = 1179

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 230 gtcctccagtatctccaagg 249
           ||||||||||||||||||||
Sbjct: 213 gtcctccagtatctccaagg 232
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>gb|AC140314.2| Mus musculus BAC clone RP23-395L3 from chromosome 12, complete sequence
          Length = 191322

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 126    caaaatatcacaaactgaaa 145
              ||||||||||||||||||||
Sbjct: 145329 caaaatatcacaaactgaaa 145348
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>gb|AC109271.10| Mus musculus chromosome 1, clone RP23-353I19, complete sequence
          Length = 221001

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 189    cacttggatcacagtgcaca 208
              ||||||||||||||||||||
Sbjct: 179086 cacttggatcacagtgcaca 179105
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>gb|AC084158.2| Caenorhabditis elegans cosmid Y69A2AR, complete sequence
          Length = 188616

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 127   aaaatatcacaaactgaaaa 146
             ||||||||||||||||||||
Sbjct: 64250 aaaatatcacaaactgaaaa 64269
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>gb|AC138312.3| Mus musculus BAC clone RP23-235K7 from chromosome 9, complete sequence
          Length = 176504

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 93    tacagcaaaatttgaattta 112
             ||||||||||||||||||||
Sbjct: 62256 tacagcaaaatttgaattta 62237
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>gb|AC122287.4| Mus musculus BAC clone RP23-253A15 from 1, complete sequence
          Length = 226926

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 189    cacttggatcacagtgcaca 208
              ||||||||||||||||||||
Sbjct: 201188 cacttggatcacagtgcaca 201169
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>emb|AL109742.12|HSJ542O18 Human DNA sequence from clone RP4-542O18 on chromosome 1p32.3-34.1
             Contains GSSs, complete sequence
          Length = 101453

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 123   caacaaaatatcacaaactg 142
             ||||||||||||||||||||
Sbjct: 50497 caacaaaatatcacaaactg 50478
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>gb|AC164162.2| Mus musculus BAC clone RP23-253E17 from chromosome 16, complete
             sequence
          Length = 174250

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 230   gtcctccagtatctccaagg 249
             ||||||||||||||||||||
Sbjct: 21763 gtcctccagtatctccaagg 21744
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>gb|AC060798.10| Homo sapiens chromosome 17, clone RP11-615P24, complete sequence
          Length = 171994

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 120   aagcaacaaaatatcacaaactga 143
             ||||| ||||||||||||||||||
Sbjct: 83726 aagcatcaaaatatcacaaactga 83749
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>gb|AC096575.1| Homo sapiens BAC clone RP11-521E5 from 4, complete sequence
          Length = 180423

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 124   aacaaaatatcacaaactga 143
             ||||||||||||||||||||
Sbjct: 39068 aacaaaatatcacaaactga 39049
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>gb|AC092295.2| Homo sapiens chromosome 19 clone CTD-2630F21, complete sequence
          Length = 165566

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 124   aacaaaatatcacaaactga 143
             ||||||||||||||||||||
Sbjct: 82883 aacaaaatatcacaaactga 82902
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>dbj|AK162675.1| Mus musculus adult female vagina cDNA, RIKEN full-length enriched
           library, clone:9930004C12 product:unclassifiable, full
           insert sequence
          Length = 3747

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 230 gtcctccagtatctccaagg 249
           ||||||||||||||||||||
Sbjct: 297 gtcctccagtatctccaagg 316
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>dbj|AK053887.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched
           library, clone:E130318F11 product:unclassifiable, full
           insert sequence
          Length = 1756

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 92  ctacagcaaaatttgaatttacag 115
           ||||| ||||||||||||||||||
Sbjct: 486 ctacatcaaaatttgaatttacag 463
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>gb|AC155311.2| Mus musculus BAC clone RP23-407F7 from chromosome 12, complete sequence
          Length = 166104

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 126    caaaatatcacaaactgaaa 145
              ||||||||||||||||||||
Sbjct: 159303 caaaatatcacaaactgaaa 159284
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>gb|AC009243.3|AC009243 Genomic sequence for Arabidopsis thaliana BAC F28K19 from chromosome I,
             complete sequence
          Length = 110565

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 262   tttatcagattaatacacct 281
             ||||||||||||||||||||
Sbjct: 65589 tttatcagattaatacacct 65608
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>gb|AC009756.9|AC009756 Homo sapiens, clone RP11-45P2, complete sequence
          Length = 178624

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 124   aacaaaatatcacaaactga 143
             ||||||||||||||||||||
Sbjct: 88649 aacaaaatatcacaaactga 88668
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>dbj|AB012047.1| Arabidopsis thaliana gene for sulfate transporter, complete cds,
            clone:AST56
          Length = 6114

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 262  tttatcagattaatacacct 281
            ||||||||||||||||||||
Sbjct: 1706 tttatcagattaatacacct 1687
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>dbj|AB090812.1| Anopheles gambiae retrotransposon RTAg3 DNA, complete sequence
          Length = 6448

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 94  acagcaaaatttgaatttac 113
           ||||||||||||||||||||
Sbjct: 583 acagcaaaatttgaatttac 602
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>dbj|AP003679.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-634G3, complete
             sequences
          Length = 60000

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 124   aacaaaatatcacaaactga 143
             ||||||||||||||||||||
Sbjct: 37019 aacaaaatatcacaaactga 37038
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>emb|AJ249412.1|MMU249412 Mus musculus partial PI3Kgamma gene for phosphoinositide 3-kinase
            gamma, 5'UTR
          Length = 2206

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 126  caaaatatcacaaactgaaa 145
            ||||||||||||||||||||
Sbjct: 1124 caaaatatcacaaactgaaa 1105
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>emb|AL845292.4| Mouse DNA sequence from clone RP23-386I21 on chromosome 2, complete
             sequence
          Length = 186607

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 92    ctacagcaaaatttgaatttacag 115
             ||||| ||||||||||||||||||
Sbjct: 32436 ctacatcaaaatttgaatttacag 32413
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>emb|AL772278.7| Mouse DNA sequence from clone RP23-416G5 on chromosome 4, complete
             sequence
          Length = 199565

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 17    caagtttttcctgttacaat 36
             ||||||||||||||||||||
Sbjct: 75590 caagtttttcctgttacaat 75571


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,365,043
Number of Sequences: 3902068
Number of extensions: 3365043
Number of successful extensions: 70809
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 70644
Number of HSP's gapped (non-prelim): 156
length of query: 305
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 283
effective length of database: 17,147,199,772
effective search space: 4852657535476
effective search space used: 4852657535476
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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