ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl22f11 |
|---|---|
| Clone Library Name | barley_pub |
>LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12)| Length = 918 Score = 162 bits (411), Expect = 1e-40 Identities = 76/87 (87%), Positives = 79/87 (90%) Frame = -3 Query: 363 STHSPDEEYLGESLDKGAAPWTGDEEALEAHGMFAADVRRAEETIEGRNADHGRRNRCGA 184 STHSPDEEYLGE D+G PWT DE A+ AHGMFAADVRRAEETIE RNADHGR+NRCGA Sbjct: 832 STHSPDEEYLGEGRDEGGVPWTADEAAVAAHGMFAADVRRAEETIERRNADHGRKNRCGA 891 Query: 183 GVLPYELLAPSSPPGVTCRGVPNSISI 103 GVLPYELLAPSSPPGVTCRGVPNSISI Sbjct: 892 GVLPYELLAPSSPPGVTCRGVPNSISI 918
>LOX5_ORYSA (Q7XV13) Putative lipoxygenase 5 (EC 1.13.11.12)| Length = 899 Score = 124 bits (311), Expect = 6e-29 Identities = 63/87 (72%), Positives = 68/87 (78%) Frame = -3 Query: 363 STHSPDEEYLGESLDKGAAPWTGDEEALEAHGMFAADVRRAEETIEGRNADHGRRNRCGA 184 STHS DEEYLGE D+ WT D AL A FAADVRRAEE IE RNAD RRNRCGA Sbjct: 816 STHSADEEYLGERPDEA---WTADPAALAAAREFAADVRRAEEEIERRNADPSRRNRCGA 872 Query: 183 GVLPYELLAPSSPPGVTCRGVPNSISI 103 GVLPYEL+APSS PG+TCRGVPNS++I Sbjct: 873 GVLPYELMAPSSGPGITCRGVPNSVTI 899
>LOX23_HORVU (Q8GSM2) Lipoxygenase 2.3, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:3) Length = 896 Score = 88.2 bits (217), Expect = 4e-18 Identities = 44/87 (50%), Positives = 57/87 (65%) Frame = -3 Query: 363 STHSPDEEYLGESLDKGAAPWTGDEEALEAHGMFAADVRRAEETIEGRNADHGRRNRCGA 184 S+HSPDEEY+GE + W + A F+ ++ AE TI+ RN + +NRCGA Sbjct: 813 SSHSPDEEYMGEYAEPA---WLAEPMVKAAFEKFSGRLKEAEGTIDMRNNNPENKNRCGA 869 Query: 183 GVLPYELLAPSSPPGVTCRGVPNSISI 103 G++PYELL P S PGVT RG+PNSISI Sbjct: 870 GIVPYELLKPFSEPGVTGRGIPNSISI 896
>LOXC2_ORYSA (Q84YK8) Probable lipoxygenase 8, chloroplast precursor (EC| 1.13.11.12) Length = 941 Score = 86.3 bits (212), Expect = 2e-17 Identities = 43/87 (49%), Positives = 53/87 (60%) Frame = -3 Query: 363 STHSPDEEYLGESLDKGAAPWTGDEEALEAHGMFAADVRRAEETIEGRNADHGRRNRCGA 184 STHS DEEYLG + PW D A+ F A ++ E I+GRN D +NRCGA Sbjct: 858 STHSTDEEYLGGEQTR---PWNSDAAVQAAYAGFTARLKEIEGVIDGRNKDRKLKNRCGA 914 Query: 183 GVLPYELLAPSSPPGVTCRGVPNSISI 103 G+LPY+L+ P S GVT G+PNS SI Sbjct: 915 GILPYQLMKPFSDAGVTGMGIPNSTSI 941
>LOXC1_ORYSA (P38419) Lipoxygenase 7, chloroplast precursor (EC 1.13.11.12)| Length = 924 Score = 85.9 bits (211), Expect = 2e-17 Identities = 43/87 (49%), Positives = 54/87 (62%) Frame = -3 Query: 363 STHSPDEEYLGESLDKGAAPWTGDEEALEAHGMFAADVRRAEETIEGRNADHGRRNRCGA 184 S+HS DEEYLG + PW D A+ FAA ++ E I+GRN D +NRCGA Sbjct: 841 SSHSTDEEYLGGEQTR---PWNSDAAVQAAYDGFAARLKEIEGVIDGRNKDRKLKNRCGA 897 Query: 183 GVLPYELLAPSSPPGVTCRGVPNSISI 103 G+LPY+L+ P S GVT G+PNS SI Sbjct: 898 GILPYQLMKPFSDSGVTGMGIPNSTSI 924
>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)| Length = 859 Score = 79.7 bits (195), Expect = 2e-15 Identities = 42/87 (48%), Positives = 54/87 (62%) Frame = -3 Query: 363 STHSPDEEYLGESLDKGAAPWTGDEEALEAHGMFAADVRRAEETIEGRNADHGRRNRCGA 184 STHS DE YLG+ + + W ++EALEA F V+ E+ I+ RN D +NR G Sbjct: 776 STHSSDEVYLGQ---RDSKEWAAEKEALEAFEKFGEKVKEIEKNIDERNDDETLKNRTGL 832 Query: 183 GVLPYELLAPSSPPGVTCRGVPNSISI 103 +PY LL PSS GVT RG+PNS+SI Sbjct: 833 VKMPYTLLFPSSEGGVTGRGIPNSVSI 859
>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)| Length = 866 Score = 77.4 bits (189), Expect = 8e-15 Identities = 41/87 (47%), Positives = 50/87 (57%) Frame = -3 Query: 363 STHSPDEEYLGESLDKGAAPWTGDEEALEAHGMFAADVRRAEETIEGRNADHGRRNRCGA 184 S H+ DE+YLGE ++ WT D EA F + EE + RN D RNR G Sbjct: 782 SRHASDEQYLGERIE--GDDWTTDSVPKEAFKRFGKKLAEIEEKLTQRNNDESLRNRYGP 839 Query: 183 GVLPYELLAPSSPPGVTCRGVPNSISI 103 +PY LL PSS G+TCRG+PNSISI Sbjct: 840 VKMPYTLLYPSSEEGLTCRGIPNSISI 866
>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)| Length = 857 Score = 77.4 bits (189), Expect = 8e-15 Identities = 42/87 (48%), Positives = 50/87 (57%) Frame = -3 Query: 363 STHSPDEEYLGESLDKGAAPWTGDEEALEAHGMFAADVRRAEETIEGRNADHGRRNRCGA 184 S H+ DE YLGE + WT D ALEA F + + E + RN D RNRCG Sbjct: 774 SRHASDEVYLGE---RDNPNWTSDTRALEAFKRFGNKLAQIENKLSERNNDEKLRNRCGP 830 Query: 183 GVLPYELLAPSSPPGVTCRGVPNSISI 103 +PY LL PSS G+T RG+PNSISI Sbjct: 831 VQMPYTLLLPSSKEGLTFRGIPNSISI 857
>LOXC_ARATH (P38418) Lipoxygenase, chloroplast precursor (EC 1.13.11.12)| Length = 896 Score = 72.4 bits (176), Expect = 3e-13 Identities = 41/87 (47%), Positives = 51/87 (58%) Frame = -3 Query: 363 STHSPDEEYLGESLDKGAAPWTGDEEALEAHGMFAADVRRAEETIEGRNADHGRRNRCGA 184 STHSPDEEY+GE + A W + A F ++ E I+ RN + +NR GA Sbjct: 813 STHSPDEEYIGEQQE---ASWANEPVINAAFERFKGKLQYLEGVIDERNVNITLKNRAGA 869 Query: 183 GVLPYELLAPSSPPGVTCRGVPNSISI 103 GV+ YELL P+S GVT GVP SISI Sbjct: 870 GVVKYELLKPTSEHGVTGMGVPYSISI 896
>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)| Length = 861 Score = 72.4 bits (176), Expect = 3e-13 Identities = 41/87 (47%), Positives = 50/87 (57%) Frame = -3 Query: 363 STHSPDEEYLGESLDKGAAPWTGDEEALEAHGMFAADVRRAEETIEGRNADHGRRNRCGA 184 S H+ DE YLGE + WT D+ ALEA F + E+ + RN D RNR G Sbjct: 778 SRHASDELYLGE---RDNPNWTSDKRALEAFKKFGNKLAEIEKKLTQRNNDEKLRNRHGP 834 Query: 183 GVLPYELLAPSSPPGVTCRGVPNSISI 103 +PY LL PSS G+T RG+PNSISI Sbjct: 835 VEMPYTLLYPSSKEGLTFRGIPNSISI 861
>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)| Length = 864 Score = 71.6 bits (174), Expect = 4e-13 Identities = 41/87 (47%), Positives = 51/87 (58%) Frame = -3 Query: 363 STHSPDEEYLGESLDKGAAPWTGDEEALEAHGMFAADVRRAEETIEGRNADHGRRNRCGA 184 S H+ DE YLGE + WT D++ALEA F + + E I RN+D RNR G Sbjct: 781 SRHASDEIYLGE---RETPNWTTDKKALEAFKRFGSKLTGIEGKINARNSDPSLRNRTGP 837 Query: 183 GVLPYELLAPSSPPGVTCRGVPNSISI 103 LPY LL SS G+T +G+PNSISI Sbjct: 838 VQLPYTLLHRSSEEGLTFKGIPNSISI 864
>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)| Length = 865 Score = 70.9 bits (172), Expect = 7e-13 Identities = 39/87 (44%), Positives = 51/87 (58%) Frame = -3 Query: 363 STHSPDEEYLGESLDKGAAPWTGDEEALEAHGMFAADVRRAEETIEGRNADHGRRNRCGA 184 S H+ DE YLG+ + WT D +AL+A F ++ EE + +N D NR G Sbjct: 783 SRHASDEVYLGQ---RDNPHWTSDSKALQAFQKFGNKLKEIEEKLARKNNDQSLSNRLGP 839 Query: 183 GVLPYELLAPSSPPGVTCRGVPNSISI 103 LPY LL P+S G+TCRG+PNSISI Sbjct: 840 VQLPYTLLHPNS-EGLTCRGIPNSISI 865
>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)| Length = 839 Score = 70.5 bits (171), Expect = 1e-12 Identities = 41/88 (46%), Positives = 52/88 (59%), Gaps = 1/88 (1%) Frame = -3 Query: 363 STHSPDEEYLGESLDKGAAPWTGDEEALEAHGMFAADVRRAEETIEGRNADHGRR-NRCG 187 STH+ DE YLG+ + WT D +AL+A F ++ EE + RN D + NR G Sbjct: 755 STHASDEVYLGQ---RDNPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLG 811 Query: 186 AGVLPYELLAPSSPPGVTCRGVPNSISI 103 LPY LL PSS G+T RG+PNSISI Sbjct: 812 PVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)| Length = 853 Score = 70.1 bits (170), Expect = 1e-12 Identities = 39/87 (44%), Positives = 48/87 (55%) Frame = -3 Query: 363 STHSPDEEYLGESLDKGAAPWTGDEEALEAHGMFAADVRRAEETIEGRNADHGRRNRCGA 184 S H+ DE YLG+ G WT D LEA F + E+ + +N D RNR G Sbjct: 769 SRHASDEFYLGQR--DGGDYWTSDAGPLEAFKRFGKKLEEIEKKLIEKNKDETLRNRYGP 826 Query: 183 GVLPYELLAPSSPPGVTCRGVPNSISI 103 +PY LL PSS G+T RG+PNSISI Sbjct: 827 AKMPYTLLYPSSEEGLTFRGIPNSISI 853
>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 66.6 bits (161), Expect = 1e-11 Identities = 38/88 (43%), Positives = 51/88 (57%), Gaps = 1/88 (1%) Frame = -3 Query: 363 STHSPDEEYLGESLDKGAAPWTGDEEALEAHGMFAADVRRAEETIEGRNADHGRRNRCGA 184 S H+ DE YLG+ + WT + +AL+A F ++ EE I GRN D RNR G Sbjct: 778 SRHASDEVYLGQ---RDNPNWTNNIKALQAFKRFGQKLKEIEEKIMGRNKDSSLRNRNGP 834 Query: 183 GVLPYELLAPS-SPPGVTCRGVPNSISI 103 +PY +L P+ G+T RG+PNSISI Sbjct: 835 VKMPYTVLLPTCEDEGLTFRGIPNSISI 862
>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)| Length = 864 Score = 65.9 bits (159), Expect = 2e-11 Identities = 37/87 (42%), Positives = 48/87 (55%) Frame = -3 Query: 363 STHSPDEEYLGESLDKGAAPWTGDEEALEAHGMFAADVRRAEETIEGRNADHGRRNRCGA 184 S H+ DE YLG+ + WT D +AL+A F + E + +N D +R G Sbjct: 781 SRHASDEVYLGQ---RENPHWTSDSKALQAFQKFGNKLAEIEAKLTNKNNDPSLYHRVGP 837 Query: 183 GVLPYELLAPSSPPGVTCRGVPNSISI 103 LPY LL PSS G+T RG+PNSISI Sbjct: 838 VQLPYTLLHPSSKEGLTFRGIPNSISI 864
>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)| Length = 866 Score = 65.5 bits (158), Expect = 3e-11 Identities = 38/93 (40%), Positives = 49/93 (52%), Gaps = 6/93 (6%) Frame = -3 Query: 363 STHSPDEEYLGESLDKGAAPWTGDEEALEAHGMFAADVRRAEETIEGRNADHGRRNRCGA 184 S HS DE YLG+ + WT D ALEA F+ + E + G N D G +NR G Sbjct: 777 SKHSSDEVYLGQ---RDTPAWTSDARALEAFRRFSDRLVEIEGKVVGMNGDAGLKNRNGP 833 Query: 183 GVLPYELLAPS------SPPGVTCRGVPNSISI 103 PY LL P+ + G+T +G+PNSISI Sbjct: 834 AEFPYMLLYPNTSDVTGAAAGITAKGIPNSISI 866
>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)| Length = 870 Score = 65.1 bits (157), Expect = 4e-11 Identities = 38/93 (40%), Positives = 49/93 (52%), Gaps = 6/93 (6%) Frame = -3 Query: 363 STHSPDEEYLGESLDKGAAPWTGDEEALEAHGMFAADVRRAEETIEGRNADHGRRNRCGA 184 S HS DE YLG+ + WT D +ALEA F A + E + N D R+NR G Sbjct: 781 SKHSSDEVYLGQ---RDTPEWTSDAKALEAFKRFGARLTEIESRVVAMNKDPHRKNRVGP 837 Query: 183 GVLPYELLAPSS------PPGVTCRGVPNSISI 103 PY LL P++ G++ RG+PNSISI Sbjct: 838 TNFPYTLLYPNTSDLKGDAAGLSARGIPNSISI 870
>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)| Length = 861 Score = 63.2 bits (152), Expect = 2e-10 Identities = 36/87 (41%), Positives = 49/87 (56%) Frame = -3 Query: 363 STHSPDEEYLGESLDKGAAPWTGDEEALEAHGMFAADVRRAEETIEGRNADHGRRNRCGA 184 S H+ DE YLG+ + + WT D+E L A F + E+ I RN D+ NR G Sbjct: 778 SRHTTDEIYLGQ---RESPEWTKDKEPLAAFDRFGKKLTDIEKQIIQRNGDNILTNRSGP 834 Query: 183 GVLPYELLAPSSPPGVTCRGVPNSISI 103 PY LL P+S G+T +G+PNS+SI Sbjct: 835 VNAPYTLLFPTSEGGLTGKGIPNSVSI 861
>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)| Length = 863 Score = 61.6 bits (148), Expect = 4e-10 Identities = 36/93 (38%), Positives = 48/93 (51%), Gaps = 6/93 (6%) Frame = -3 Query: 363 STHSPDEEYLGESLDKGAAPWTGDEEALEAHGMFAADVRRAEETIEGRNADHGRRNRCGA 184 S HS DE YLG+ + WT D +ALEA F+ + E + N D +NR G Sbjct: 774 SKHSADEIYLGQ---RDTPEWTSDPKALEAFKRFSRQLVEIESKVLNMNKDPLLKNRVGP 830 Query: 183 GVLPYELLAPS------SPPGVTCRGVPNSISI 103 PY L+ P+ + G+T RG+PNSISI Sbjct: 831 ANFPYTLMFPNTSDNKGAAEGITARGIPNSISI 863
>LOX22_HORVU (Q8GSM3) Lipoxygenase 2.2, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:2) Length = 932 Score = 61.2 bits (147), Expect = 6e-10 Identities = 37/92 (40%), Positives = 50/92 (54%), Gaps = 5/92 (5%) Frame = -3 Query: 363 STHSPDEEYLGESLDKGAAPWTGDEEALEAHGMFAADVRRAEETIEGRNADHGRRNRCGA 184 S+H+ DEEY+G + W D E +A +F +R E +E N D RRNR GA Sbjct: 844 SSHASDEEYMGTHQEPA---WQRDGEVDKAFQVFQKKMRDIAEQVEEWNKDDSRRNRHGA 900 Query: 183 GVLPYELLAPSSPPGVTCR-----GVPNSISI 103 GV+PY LL P + + + G+PNSISI Sbjct: 901 GVVPYVLLRPLNGNPMDAKTVMEMGIPNSISI 932
>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)| Length = 860 Score = 60.8 bits (146), Expect = 8e-10 Identities = 35/87 (40%), Positives = 49/87 (56%) Frame = -3 Query: 363 STHSPDEEYLGESLDKGAAPWTGDEEALEAHGMFAADVRRAEETIEGRNADHGRRNRCGA 184 S H+ DE YLG+ + + WT D+E L A F + E+ I RN ++ NR G Sbjct: 777 SRHTTDEIYLGQ---RESPEWTKDKEPLAAFERFGNKLTDIEKQIMQRNGNNILTNRTGP 833 Query: 183 GVLPYELLAPSSPPGVTCRGVPNSISI 103 PY LL P+S G+T +G+PNS+SI Sbjct: 834 VNAPYTLLFPTSEGGLTGKGIPNSVSI 860
>LOXB_PHAVU (P27481) Lipoxygenase (EC 1.13.11.12) (Fragment)| Length = 741 Score = 60.5 bits (145), Expect = 1e-09 Identities = 34/81 (41%), Positives = 42/81 (51%) Frame = -3 Query: 363 STHSPDEEYLGESLDKGAAPWTGDEEALEAHGMFAADVRRAEETIEGRNADHGRRNRCGA 184 S H+ DE YLGE G WT D LEA F + E+ + +N D RNR G Sbjct: 663 SRHASDEIYLGER--DGGDHWTSDAGPLEAFKRFGKKLAEIEKKLVQKNNDETLRNRTGP 720 Query: 183 GVLPYELLAPSSPPGVTCRGV 121 +PY LL PSS G+T RG+ Sbjct: 721 AKMPYTLLYPSSEEGLTFRGI 741
>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 60.1 bits (144), Expect = 1e-09 Identities = 36/93 (38%), Positives = 48/93 (51%), Gaps = 6/93 (6%) Frame = -3 Query: 363 STHSPDEEYLGESLDKGAAPWTGDEEALEAHGMFAADVRRAEETIEGRNADHGRRNRCGA 184 S HS DE YLG+ + WT D +ALE F+ + E + G N D +NR G Sbjct: 773 SKHSSDELYLGQ---RDTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGP 829 Query: 183 GVLPYELLAPS------SPPGVTCRGVPNSISI 103 PY LL P+ + G+T +G+PNSISI Sbjct: 830 AKFPYMLLYPNTSDHKGAAAGLTAKGIPNSISI 862
>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)| Length = 859 Score = 59.7 bits (143), Expect = 2e-09 Identities = 34/87 (39%), Positives = 48/87 (55%) Frame = -3 Query: 363 STHSPDEEYLGESLDKGAAPWTGDEEALEAHGMFAADVRRAEETIEGRNADHGRRNRCGA 184 S H+ DE YLG+ + + WT D+E L A F + E I N+ +NR G Sbjct: 776 SRHASDEVYLGQ---RDSIEWTKDKEPLVAFERFGKMLSDIENRIMIMNSHKSWKNRSGP 832 Query: 183 GVLPYELLAPSSPPGVTCRGVPNSISI 103 +PY LL P+S G+T +G+PNS+SI Sbjct: 833 VNVPYTLLFPTSEEGLTGKGIPNSVSI 859
>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)| Length = 877 Score = 57.8 bits (138), Expect = 6e-09 Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 7/94 (7%) Frame = -3 Query: 363 STHSPDEEYLGESLDKGAAPWTGDEEALEAHGMFAADVRRAEETIEGRNADHGRRNRCGA 184 S HS DE YLG+ + WT D +AL+A F + + E I+ N + +NR G Sbjct: 787 SKHSSDEVYLGQ---RDTPEWTSDAKALDAFKRFGSRLVDIENRIKDMNGNSALKNRNGP 843 Query: 183 GVLPYELLAPSSP-------PGVTCRGVPNSISI 103 +PY LL P++ G+T G+PNSISI Sbjct: 844 VKMPYMLLYPNTSDVTKEKGQGLTAMGIPNSISI 877
>LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC 1.13.11.12)| (LOX-100) (LOX2:Hv:1) Length = 936 Score = 57.8 bits (138), Expect = 6e-09 Identities = 38/97 (39%), Positives = 48/97 (49%), Gaps = 10/97 (10%) Frame = -3 Query: 363 STHSPDEEYLGESLDKGAAPWTGDEEALEAHGMFAADVRRAEETIEGRNADHGRRNRCGA 184 STHS DEEY+G + WT D +A F R+ E ++ N D R+NR GA Sbjct: 843 STHSSDEEYMGTHEEPA---WTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGA 899 Query: 183 GVLPYELLAPS----------SPPGVTCRGVPNSISI 103 G++PY LL PS V G+PNSISI Sbjct: 900 GMVPYVLLRPSDGDPTDGDPTDEKMVMEMGIPNSISI 936
>POLS_IPNVJ (P05844) Structural polyprotein (PP) [Contains: Capsid protein VP2;| p1; p2; p3; Protease VP4 (EC 3.4.21.-) (Nonstructural protein VP4) (NS); Capsid assembly protein VP3] Length = 972 Score = 32.3 bits (72), Expect = 0.29 Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 3/51 (5%) Frame = -3 Query: 252 VRRAEETIEGRNADHGRRNRCGAGVLP--YELLAPSSP-PGVTCRGVPNSI 109 VR +ET +G + +G R RC A + P YE+ PS P V G P +I Sbjct: 175 VRLEDETPQGPQSMNGARMRCTAAIAPRRYEIDLPSERLPTVAATGTPTTI 225
>SDHL_ECOLI (P16095) L-serine dehydratase 1 (EC 4.3.1.17) (L-serine deaminase| 1) (SDH 1) (L-SD1) Length = 454 Score = 30.4 bits (67), Expect = 1.1 Identities = 19/64 (29%), Positives = 33/64 (51%) Frame = +2 Query: 107 EMLLGTPRQVTPGGELGASSSYGSTPAPHRFRLPWSALRPSMVSSARRTSAANMPCASRA 286 E+L G+P QV E+G + G T P ++ + + ++S + +AA M A R Sbjct: 356 ELLGGSPEQVCVAAEIGMEHNLGLTCDPVAGQVQVPCIERNAIASVKAINAARM--ALRR 413 Query: 287 SSSP 298 +S+P Sbjct: 414 TSAP 417
>ANP_NOTCO (P24856) Ice-structuring glycoprotein precursor (ISGP) (Antifreeze| glycopeptide polyprotein) (AFGP polyprotein) [Contains: AFGP7 (AFGP 7); AFGP8 (AFGP 8); AFGP8-like] (Fragment) Length = 790 Score = 30.0 bits (66), Expect = 1.4 Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 1/85 (1%) Frame = +2 Query: 62 TKSTANRGHTMAYHMEMLLGTPRQV-TPGGELGASSSYGSTPAPHRFRLPWSALRPSMVS 238 T +TA T A+H TP TP A+++ +TPA F +A P+ + Sbjct: 110 TAATAATPATPAFHFAATAATPATAATPALIFAATAATAATPATPAFHFAATAATPATAA 169 Query: 239 SARRTSAANMPCASRASSSPVHGAA 313 + AA A+ +++ ++ AA Sbjct: 170 TPALIFAATAATAATPATAALNFAA 194 Score = 27.7 bits (60), Expect = 7.2 Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 1/85 (1%) Frame = +2 Query: 62 TKSTANRGHTMAYHMEMLLGTPRQV-TPGGELGASSSYGSTPAPHRFRLPWSALRPSMVS 238 T +TA T A++ TP TP A+++ +TPA +A P+ + Sbjct: 382 TAATAATPATPAFNFAATAATPATAATPALIFAATAATAATPATAALNFAATAATPATAA 441 Query: 239 SARRTSAANMPCASRASSSPVHGAA 313 + AA A+ +++ +H AA Sbjct: 442 TPALIFAATAATAATPATAALHFAA 466 Score = 27.7 bits (60), Expect = 7.2 Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 1/85 (1%) Frame = +2 Query: 62 TKSTANRGHTMAYHMEMLLGTPRQV-TPGGELGASSSYGSTPAPHRFRLPWSALRPSMVS 238 T +TA T A+H TP TP A+++ +TPA +A P+ + Sbjct: 144 TAATAATPATPAFHFAATAATPATAATPALIFAATAATAATPATAALNFAATAATPATAA 203 Query: 239 SARRTSAANMPCASRASSSPVHGAA 313 + AA A+ +++ ++ AA Sbjct: 204 TPALIFAATAATAATPATAALNFAA 228
>XYNA_PSEFL (P14768) Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8) (Xylanase| A) (1,4-beta-D-xylan xylanohydrolase A) (XYLA) Length = 611 Score = 29.3 bits (64), Expect = 2.5 Identities = 21/80 (26%), Positives = 37/80 (46%) Frame = +2 Query: 119 GTPRQVTPGGELGASSSYGSTPAPHRFRLPWSALRPSMVSSARRTSAANMPCASRASSSP 298 G+ + + GG + S S S+ AP ++ PS ++S+ +S A+ +S ASSSP Sbjct: 113 GSAERPSVGGSI-CSGSVASSSAP-------ASSVPSSIASSSPSSVASSVISSMASSSP 164 Query: 299 VHGAAXXXXXXXXXXXXGEC 358 V ++ +C Sbjct: 165 VSSSSVASSTPGSSSGNQQC 184
>SDHL_MYCTU (P66773) L-serine dehydratase (EC 4.3.1.17) (L-serine deaminase)| (SDH) (L-SD) Length = 461 Score = 28.9 bits (63), Expect = 3.2 Identities = 17/54 (31%), Positives = 26/54 (48%) Frame = +2 Query: 107 EMLLGTPRQVTPGGELGASSSYGSTPAPHRFRLPWSALRPSMVSSARRTSAANM 268 E+L GTPRQV E+ S G T P + + + +S+ + +AA M Sbjct: 359 EILGGTPRQVENAAEIAMEHSLGLTCDPIAGLVQIPCIERNAISAGKAINAARM 412
>SDHL_MYCBO (P66774) L-serine dehydratase (EC 4.3.1.17) (L-serine deaminase)| (SDH) (L-SD) Length = 461 Score = 28.9 bits (63), Expect = 3.2 Identities = 17/54 (31%), Positives = 26/54 (48%) Frame = +2 Query: 107 EMLLGTPRQVTPGGELGASSSYGSTPAPHRFRLPWSALRPSMVSSARRTSAANM 268 E+L GTPRQV E+ S G T P + + + +S+ + +AA M Sbjct: 359 EILGGTPRQVENAAEIAMEHSLGLTCDPIAGLVQIPCIERNAISAGKAINAARM 412
>Y2083_MYCTU (Q10691) Hypothetical protein Rv2083/MT2145| Length = 314 Score = 28.9 bits (63), Expect = 3.2 Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 1/58 (1%) Frame = +2 Query: 143 GGELGASSSYGSTPAPHRFRLPWSALRPSMVSSARRTSAANMPCASRASSSPVH-GAA 313 GG++G + G+TP + P P + T +A MP AS + H GAA Sbjct: 172 GGDVGGGGAGGTTPTGYLGPPPVPTSSPPTTPAGAPTKSATMPPPGGASPASAHMGAA 229
>UCRI_SCHPO (Q09154) Ubiquinol-cytochrome c reductase iron-sulfur subunit,| mitochondrial precursor (EC 1.10.2.2) (Rieske iron-sulfur protein) (RISP) Length = 228 Score = 28.5 bits (62), Expect = 4.2 Identities = 18/70 (25%), Positives = 28/70 (40%) Frame = +2 Query: 62 TKSTANRGHTMAYHMEMLLGTPRQVTPGGELGASSSYGSTPAPHRFRLPWSALRPSMVSS 241 TKST +R ++Y M G +GA ++ G+ H F WSA + S Sbjct: 58 TKSTGDRSRVISYAMV------------GTMGALTAAGAQATVHDFLASWSASADVLAMS 105 Query: 242 ARRTSAANMP 271 + +P Sbjct: 106 KAEVDLSKIP 115
>G6PE_RABIT (P56201) GDH/6PGL endoplasmic bifunctional protein [Includes:| Glucose 1-dehydrogenase (EC 1.1.1.47) (Hexose-6-phosphate dehydrogenase); 6-phosphogluconolactonase (EC 3.1.1.31) (6PGL)] Length = 763 Score = 28.5 bits (62), Expect = 4.2 Identities = 17/48 (35%), Positives = 23/48 (47%) Frame = +2 Query: 101 HMEMLLGTPRQVTPGGELGASSSYGSTPAPHRFRLPWSALRPSMVSSA 244 H+ LG P Q+ PG GSTP P F++ + R S + SA Sbjct: 501 HLSFSLGQPEQLVPGP--------GSTPRPSDFQVLGAKYRESPLISA 540
>MSP1_PLAYO (P13828) Merozoite surface protein 1 precursor (Merozoite surface| antigens) (PMMSA) (230 kDa) (PY230) Length = 1772 Score = 28.5 bits (62), Expect = 4.2 Identities = 20/57 (35%), Positives = 28/57 (49%) Frame = +2 Query: 125 PRQVTPGGELGASSSYGSTPAPHRFRLPWSALRPSMVSSARRTSAANMPCASRASSS 295 P + TP GE GAS + G+T A + ++ S S+A TS P A+ A S Sbjct: 981 PGEGTPSGEAGASGTEGAT-ASNAATPAGTSASGSAASNASTTSDVTPPAAAAAVPS 1036
>YES_CHICK (P09324) Tyrosine-protein kinase Yes (EC 2.7.10.2) (p61-Yes)| Length = 540 Score = 28.1 bits (61), Expect = 5.5 Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 2/46 (4%) Frame = +2 Query: 62 TKSTANRGHTMAYHMEML--LGTPRQVTPGGELGASSSYGSTPAPH 193 T+S A +G + ++ + G P +TP G GASSS+ + P+P+ Sbjct: 39 TQSPAIKGSAVNFNSHSMTPFGGPSGMTPFG--GASSSFSAVPSPY 82
>MUC1_MOUSE (Q02496) Mucin-1 precursor (Polymorphic epithelial mucin) (PEMT)| (Episialin) Length = 630 Score = 28.1 bits (61), Expect = 5.5 Identities = 27/90 (30%), Positives = 39/90 (43%), Gaps = 2/90 (2%) Frame = +2 Query: 44 NPLKS*TKSTANRGHTMAYHMEMLLGT--PRQVTPGGELGASSSYGSTPAPHRFRLPWSA 217 +P++S T S A R + +L GT P P + ++G T +P L S Sbjct: 66 SPVQSSTSSPATRAPEDSTSTAVLSGTSSPATTAPVNSASSPVAHGDTSSPATSPLKDSN 125 Query: 218 LRPSMVSSARRTSAANMPCASRASSSPVHG 307 P +V S ++A P S SS VHG Sbjct: 126 SSP-VVHSGTSSAATTAPVDS-TSSPVVHG 153
>YES_AVISY (P00527) Tyrosine-protein kinase transforming protein YES (EC| 2.7.10.2) (Fragment) Length = 528 Score = 28.1 bits (61), Expect = 5.5 Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 2/46 (4%) Frame = +2 Query: 62 TKSTANRGHTMAYHMEML--LGTPRQVTPGGELGASSSYGSTPAPH 193 T+S A +G + ++ + G P +TP G GASSS+ + P+P+ Sbjct: 32 TQSPAIKGSAVNFNSHSMTPFGGPSGMTPFG--GASSSFSAVPSPY 75
>HTF4_MOUSE (Q61286) Transcription factor 12 (Transcription factor HTF-4)| (E-box-binding protein) (DNA-binding protein HTF4) (Class A helix-loop-helix transcription factor ME1) Length = 706 Score = 27.7 bits (60), Expect = 7.2 Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 7/65 (10%) Frame = +2 Query: 137 TPGGELGASSSYGSTPAPHRFRLPWSALRPSMV-------SSARRTSAANMPCASRASSS 295 T + SSSYGS + R P ++ P+ + SS R S ++ P + + + Sbjct: 255 TSTSHMSQSSSYGSLHSHDRLSYPPHSVSPTDINTSLPPMSSFHRGSTSSSPYVAASHTP 314 Query: 296 PVHGA 310 P++G+ Sbjct: 315 PINGS 319
>HTF4_RAT (P51514) Transcription factor 12 (Transcription factor HTF-4)| (E-box-binding protein) (Salivary-specific cAMP response element-binding protein alpha) (SCBP alpha) (DNA-binding protein HTF4) Length = 707 Score = 27.7 bits (60), Expect = 7.2 Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 7/65 (10%) Frame = +2 Query: 137 TPGGELGASSSYGSTPAPHRFRLPWSALRPSMV-------SSARRTSAANMPCASRASSS 295 T + SSSYGS + R P ++ P+ + SS R S ++ P + + + Sbjct: 255 TSTSHMSQSSSYGSLHSHDRLSYPPHSVSPTDINTSLPPMSSFHRGSTSSSPYVAASHTP 314 Query: 296 PVHGA 310 P++G+ Sbjct: 315 PINGS 319
>COBQ_HALMA (Q5V0Z6) Probable cobyric acid synthase| Length = 492 Score = 27.7 bits (60), Expect = 7.2 Identities = 16/56 (28%), Positives = 25/56 (44%) Frame = -3 Query: 342 EYLGESLDKGAAPWTGDEEALEAHGMFAADVRRAEETIEGRNADHGRRNRCGAGVL 175 + LGE++ TGD + +E G+ E E + +H +RN G G L Sbjct: 341 QMLGEAITNATIEGTGDADRVEGLGLLPV----TTEFSESKTVEHVQRNIDGVGPL 392
>YB33_SCHPO (O14338) Serine-rich protein C2F12.03c in chromosome II| Length = 891 Score = 27.7 bits (60), Expect = 7.2 Identities = 14/46 (30%), Positives = 23/46 (50%) Frame = +2 Query: 161 SSSYGSTPAPHRFRLPWSALRPSMVSSARRTSAANMPCASRASSSP 298 S+S+ S P PHR A +S+ S+++ P A + +SP Sbjct: 702 STSFSSPPTPHRSPFSGQAFTGMGLSNYSLMSSSSFPSAQSSPTSP 747
>MIP_CHICK (P28238) Lens fiber major intrinsic protein (Aquaporin-0) (AQP0)| (MIP26) (MP26) Length = 262 Score = 27.7 bits (60), Expect = 7.2 Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 6/58 (10%) Frame = +2 Query: 77 NRGHTMAYHMEMLLGTPRQV------TPGGELGASSSYGSTPAPHRFRLPWSALRPSM 232 N T+A+ + L PR + G GA YG TPA R L SAL PS+ Sbjct: 68 NPAITLAFLLASQLSLPRALGYLLAQLLGALAGAGVLYGVTPAAVRGTLGLSALHPSV 125
>MK07_HUMAN (Q13164) Mitogen-activated protein kinase 7 (EC 2.7.11.24)| (Extracellular signal-regulated kinase 5) (ERK-5) (ERK4) (BMK1 kinase) Length = 815 Score = 27.7 bits (60), Expect = 7.2 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 13/53 (24%) Frame = -3 Query: 345 EEYLGESLDKGAAPWTGDEEA-------------LEAHGMFAADVRRAEETIE 226 EE+L +S D G A D +A LE HGM AD+ + I+ Sbjct: 747 EEFLNQSFDMGVADGPQDGQADSASLSASLLADWLEGHGMNPADIESLQREIQ 799
>MK07_MOUSE (Q9WVS8) Mitogen-activated protein kinase 7 (EC 2.7.11.24)| (Extracellular signal-regulated kinase 5) (ERK-5) (BMK1 kinase) Length = 806 Score = 27.7 bits (60), Expect = 7.2 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 13/53 (24%) Frame = -3 Query: 345 EEYLGESLDKGAAPWTGDEEA-------------LEAHGMFAADVRRAEETIE 226 EE+L +S D G A D +A LE HGM AD+ + I+ Sbjct: 738 EEFLNQSFDMGVADGPQDGQADSASLSASLLADWLEGHGMNPADIESLQREIQ 790
>MDC1_MOUSE (Q5PSV9) Mediator of DNA damage checkpoint protein 1| Length = 1707 Score = 27.3 bits (59), Expect = 9.3 Identities = 17/45 (37%), Positives = 22/45 (48%) Frame = +2 Query: 179 TPAPHRFRLPWSALRPSMVSSARRTSAANMPCASRASSSPVHGAA 313 TP+PH +AL+P+ T N P ASR +S P G A Sbjct: 1015 TPSPHSS----AALKPNT------TCPTNQPAASRPTSRPTRGRA 1049
>DP87_DICDI (Q04503) Prespore protein DP87 precursor| Length = 555 Score = 27.3 bits (59), Expect = 9.3 Identities = 20/59 (33%), Positives = 26/59 (44%) Frame = +2 Query: 137 TPGGELGASSSYGSTPAPHRFRLPWSALRPSMVSSARRTSAANMPCASRASSSPVHGAA 313 T GG SS+ S + P S+ S SS +SAA+ S ASSS A+ Sbjct: 468 TTGGSTSDSSAASSADSSAASSSPSSSAASSAASSEPSSSAASSSAPSSASSSAPSSAS 526
>LAMA5_HUMAN (O15230) Laminin alpha-5 chain precursor| Length = 3695 Score = 27.3 bits (59), Expect = 9.3 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%) Frame = -3 Query: 174 PYELLAPSSPPGVTCRGVPNSISI*YAIVCP-RFAV 70 P E L+PS PP +TC G + + A+ P R+A+ Sbjct: 1076 PTEQLSPSHPPLITCTGSDVDVQLQVAVPQPGRYAL 1111
>PHYA_ASPFU (O00092) 3-phytase A precursor (EC 3.1.3.8)| (Myo-inositol-hexaphosphate 3-phosphohydrolase A) (3 phytase A) (Myo-inositol hexakisphosphate phosphohydrolase A) Length = 465 Score = 27.3 bits (59), Expect = 9.3 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 6/49 (12%) Frame = -3 Query: 351 PDEEYLGESLDKGA-----APWTGDEEALEAHGMFAADVR-RAEETIEG 223 P+ E +LD G A GDE A +FA D+R RAE+ + G Sbjct: 199 PESETFNNTLDHGVCTKFEASQLGDEVAANFTALFAPDIRARAEKHLPG 247
>VNUC_EBOSB (Q9QP77) Nucleoprotein (Nucleocapsid protein)| Length = 738 Score = 27.3 bits (59), Expect = 9.3 Identities = 12/34 (35%), Positives = 18/34 (52%) Frame = -3 Query: 363 STHSPDEEYLGESLDKGAAPWTGDEEALEAHGMF 262 ST S E +SL++ PW ++EALE + Sbjct: 679 STESGKEYIFPDSLEEAYPPWLSEKEALEKENRY 712
>HID_DROME (Q24106) Cell death protein W (Protein head involution defective)| (Protein wrinkled) Length = 410 Score = 27.3 bits (59), Expect = 9.3 Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 2/59 (3%) Frame = +2 Query: 143 GGELGASSSYGST--PAPHRFRLPWSALRPSMVSSARRTSAANMPCASRASSSPVHGAA 313 G + ASSS G++ +PH LP SA S SA++ +S ASS AA Sbjct: 11 GADDVASSSSGASGNSSPHNHPLPSSASSSVSSSGVSSASASSASSSSSASSDGASSAA 69
>MAML1_HUMAN (Q92585) Mastermind-like protein 1 (Mam-1)| Length = 1016 Score = 27.3 bits (59), Expect = 9.3 Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 5/69 (7%) Frame = +2 Query: 107 EMLLGTPRQVTPGGELGASSSYGST-PAPHRFRLPWSALRPSMVSSARR----TSAANMP 271 E +L P+Q TP G S++ T P+ +P+ +P+ SS ++ + MP Sbjct: 409 EQMLQNPQQATPAPAPGQMSTWQQTGPSHSSLDVPYPMEKPASPSSYKQDFTNSKLLMMP 468 Query: 272 CASRASSSP 298 +++S P Sbjct: 469 SVNKSSPRP 477 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 39,820,328 Number of Sequences: 219361 Number of extensions: 695813 Number of successful extensions: 2727 Number of sequences better than 10.0: 54 Number of HSP's better than 10.0 without gapping: 2488 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2704 length of database: 80,573,946 effective HSP length: 97 effective length of database: 59,295,929 effective search space used: 1423102296 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
