ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl22f11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 323 2e-85
2dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 323 2e-85
3gb|AC125472.2| Oryza sativa (japonica cultivar-group) chromosome... 323 2e-85
4dbj|AK109440.2| Oryza sativa (japonica cultivar-group) cDNA clon... 323 2e-85
5dbj|AK121637.1| Oryza sativa (japonica cultivar-group) cDNA clon... 323 2e-85
6gb|AC126223.2| Oryza sativa (japonica cultivar-group) chromosome... 323 2e-85
7ref|XM_470535.1| Oryza sativa (japonica cultivar-group), predic... 321 9e-85
8gb|AY109573.1| Zea mays CL902_1 mRNA sequence 159 8e-36
9ref|XM_462649.1| Oryza sativa (japonica cultivar-group), predic... 103 4e-19
10dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 103 4e-19
11emb|AL606448.3|OSJN00013 Oryza sativa genomic DNA, chromosome 4,... 103 4e-19
12emb|AJ966349.1| Hordeum vulgare subsp. vulgare mRNA for lipoxyge... 84 4e-13
13ref|XM_464447.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.005
14dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.005
15dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.005
16dbj|AK071915.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.005
17dbj|AK061610.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.005
18ref|XM_483279.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.020
19ref|XM_483276.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.020
20dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.020
21dbj|AP005816.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.020
22dbj|AP006049.2| Oryza sativa (japonica cultivar-group) genomic D... 48 0.020
23dbj|AK066825.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.020
24gb|AF095896.1|AF095896 Oryza sativa lipoxygenase (CM-LOX2) mRNA,... 48 0.020
25gb|AF095895.1|AF095895 Oryza sativa lipoxygenase (CM-LOX1) mRNA,... 48 0.020
26dbj|D14000.1|RICL2OP Oryza sativa (japonica cultivar-group) lox2... 48 0.020
27gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome 46 0.079
28emb|AJ507213.1|HVU507213 Hordeum vulgare mRNA for lipoxygenase 2... 46 0.079
29dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 46 0.079
30gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 46 0.079
31gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 44 0.31
32gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 44 0.31
33emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 44 0.31
34emb|AL645799.5| Mouse DNA sequence from clone RP23-459O24 on chr... 44 0.31
35gb|AF010496.1|AF010496 Rhodobacter capsulatus strain SB1003, par... 44 0.31
36gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 42 1.2
37gb|AY952208.1| Haliotis fulgens clone Hful369 microsatellite seq... 42 1.2
38dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 1.2
39gb|AY111869.1| Zea mays CL452_-8 mRNA sequence 42 1.2
40gb|AY103567.1| Zea mays PCO116252 mRNA sequence 42 1.2
41ref|NM_191084.1| Oryza sativa (japonica cultivar-group), predic... 40 4.9
42gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 40 4.9
43ref|XM_847489.1| PREDICTED: Canis familiaris similar to 6-phosph... 40 4.9
44gb|CP000316.1| Polaromonas sp. JS666, complete genome 40 4.9
45gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 4.9
46gb|AC026782.6| Homo sapiens chromosome 5 clone CTD-2015A6, compl... 40 4.9
47dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.9
48dbj|AP003411.4| Oryza sativa (japonica cultivar-group) genomic D... 40 4.9
49gb|AE004538.1| Pseudomonas aeruginosa PAO1, section 99 of 529 of... 40 4.9
50dbj|AP003255.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.9
51emb|BX548017.3| Mouse DNA sequence from clone RP23-335I21 on chr... 40 4.9
52gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 4.9
53gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 40 4.9 
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  323 bits (163), Expect = 2e-85
 Identities = 241/267 (90%)
 Strand = Plus / Minus

                                                                           
Query: 99      atcatatggagatgctgttgggcacgccgcggcaggtgacccccggcggcgagctggggg 158
               |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 4174769 atcagatggagatgctgttgggcacgccgcggcaggtgacccccggcggcgagctgggcg 4174710

                                                                           
Query: 159     ccagcagctcgtacggcagcacccctgcgccgcaccggttccgcctgccgtggtcggcgt 218
               ||||||| ||||||||||||||||| |||||||||||||||  || ||||||||||||||
Sbjct: 4174709 ccagcagttcgtacggcagcaccccggcgccgcaccggttcttccggccgtggtcggcgt 4174650

                                                                           
Query: 219     tgcgcccctcgatggtctcctcggcgcggcgcacgtcggccgcgaacatgccgtgcgcct 278
               | |||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||| 
Sbjct: 4174649 tccgcctctcgatggtctcctcggcgcgtcgcacatcggccgcgaacatgccgtgcgccg 4174590

                                                                           
Query: 279     cgagggcctcctcgtcgcccgtccacggcgccgcgcccttgtcgaggctctcgccgaggt 338
               | | |||| |||||||  ||||||||||| |  |||||| |||  | | |||||||||||
Sbjct: 4174589 ccacggccgcctcgtccgccgtccacggcacgccgccctcgtcccgcccctcgccgaggt 4174530

                                          
Query: 339     actcctcgtcgggggagtgcgtcgaca 365
               ||||||||||||| |||||||||||||
Sbjct: 4174529 actcctcgtcgggcgagtgcgtcgaca 4174503
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  323 bits (163), Expect = 2e-85
 Identities = 241/267 (90%)
 Strand = Plus / Minus

                                                                           
Query: 99      atcatatggagatgctgttgggcacgccgcggcaggtgacccccggcggcgagctggggg 158
               |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 4174878 atcagatggagatgctgttgggcacgccgcggcaggtgacccccggcggcgagctgggcg 4174819

                                                                           
Query: 159     ccagcagctcgtacggcagcacccctgcgccgcaccggttccgcctgccgtggtcggcgt 218
               ||||||| ||||||||||||||||| |||||||||||||||  || ||||||||||||||
Sbjct: 4174818 ccagcagttcgtacggcagcaccccggcgccgcaccggttcttccggccgtggtcggcgt 4174759

                                                                           
Query: 219     tgcgcccctcgatggtctcctcggcgcggcgcacgtcggccgcgaacatgccgtgcgcct 278
               | |||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||| 
Sbjct: 4174758 tccgcctctcgatggtctcctcggcgcgtcgcacatcggccgcgaacatgccgtgcgccg 4174699

                                                                           
Query: 279     cgagggcctcctcgtcgcccgtccacggcgccgcgcccttgtcgaggctctcgccgaggt 338
               | | |||| |||||||  ||||||||||| |  |||||| |||  | | |||||||||||
Sbjct: 4174698 ccacggccgcctcgtccgccgtccacggcacgccgccctcgtcccgcccctcgccgaggt 4174639

                                          
Query: 339     actcctcgtcgggggagtgcgtcgaca 365
               ||||||||||||| |||||||||||||
Sbjct: 4174638 actcctcgtcgggcgagtgcgtcgaca 4174612
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>gb|AC125472.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0050H14, complete sequence
          Length = 142245

 Score =  323 bits (163), Expect = 2e-85
 Identities = 241/267 (90%)
 Strand = Plus / Minus

                                                                         
Query: 99    atcatatggagatgctgttgggcacgccgcggcaggtgacccccggcggcgagctggggg 158
             |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 75406 atcagatggagatgctgttgggcacgccgcggcaggtgacccccggcggcgagctgggcg 75347

                                                                         
Query: 159   ccagcagctcgtacggcagcacccctgcgccgcaccggttccgcctgccgtggtcggcgt 218
             ||||||| ||||||||||||||||| |||||||||||||||  || ||||||||||||||
Sbjct: 75346 ccagcagttcgtacggcagcaccccggcgccgcaccggttcttccggccgtggtcggcgt 75287

                                                                         
Query: 219   tgcgcccctcgatggtctcctcggcgcggcgcacgtcggccgcgaacatgccgtgcgcct 278
             | |||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||| 
Sbjct: 75286 tccgcctctcgatggtctcctcggcgcgtcgcacatcggccgcgaacatgccgtgcgccg 75227

                                                                         
Query: 279   cgagggcctcctcgtcgcccgtccacggcgccgcgcccttgtcgaggctctcgccgaggt 338
             | | |||| |||||||  ||||||||||| |  |||||| |||  | | |||||||||||
Sbjct: 75226 ccacggccgcctcgtccgccgtccacggcacgccgccctcgtcccgcccctcgccgaggt 75167

                                        
Query: 339   actcctcgtcgggggagtgcgtcgaca 365
             ||||||||||||| |||||||||||||
Sbjct: 75166 actcctcgtcgggcgagtgcgtcgaca 75140
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>dbj|AK109440.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-A07, full
            insert sequence
          Length = 1212

 Score =  323 bits (163), Expect = 2e-85
 Identities = 241/267 (90%)
 Strand = Plus / Minus

                                                                        
Query: 99   atcatatggagatgctgttgggcacgccgcggcaggtgacccccggcggcgagctggggg 158
            |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1123 atcagatggagatgctgttgggcacgccgcggcaggtgacccccggcggcgagctgggcg 1064

                                                                        
Query: 159  ccagcagctcgtacggcagcacccctgcgccgcaccggttccgcctgccgtggtcggcgt 218
            ||||||| ||||||||||||||||| |||||||||||||||  || ||||||||||||||
Sbjct: 1063 ccagcagttcgtacggcagcaccccggcgccgcaccggttcttccggccgtggtcggcgt 1004

                                                                        
Query: 219  tgcgcccctcgatggtctcctcggcgcggcgcacgtcggccgcgaacatgccgtgcgcct 278
            | |||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||| 
Sbjct: 1003 tccgcctctcgatggtctcctcggcgcgtcgcacatcggccgcgaacatgccgtgcgccg 944

                                                                        
Query: 279  cgagggcctcctcgtcgcccgtccacggcgccgcgcccttgtcgaggctctcgccgaggt 338
            | | |||| |||||||  ||||||||||| |  |||||| |||  | | |||||||||||
Sbjct: 943  ccacggccgcctcgtccgccgtccacggcacgccgccctcgtcccgcccctcgccgaggt 884

                                       
Query: 339  actcctcgtcgggggagtgcgtcgaca 365
            ||||||||||||| |||||||||||||
Sbjct: 883  actcctcgtcgggcgagtgcgtcgaca 857
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>dbj|AK121637.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033052A03, full
            insert sequence
          Length = 3067

 Score =  323 bits (163), Expect = 2e-85
 Identities = 241/267 (90%)
 Strand = Plus / Minus

                                                                        
Query: 99   atcatatggagatgctgttgggcacgccgcggcaggtgacccccggcggcgagctggggg 158
            |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 2958 atcagatggagatgctgttgggcacgccgcggcaggtgacccccggcggcgagctgggcg 2899

                                                                        
Query: 159  ccagcagctcgtacggcagcacccctgcgccgcaccggttccgcctgccgtggtcggcgt 218
            ||||||| ||||||||||||||||| |||||||||||||||  || ||||||||||||||
Sbjct: 2898 ccagcagttcgtacggcagcaccccggcgccgcaccggttcttccggccgtggtcggcgt 2839

                                                                        
Query: 219  tgcgcccctcgatggtctcctcggcgcggcgcacgtcggccgcgaacatgccgtgcgcct 278
            | |||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||| 
Sbjct: 2838 tccgcctctcgatggtctcctcggcgcgtcgcacatcggccgcgaacatgccgtgcgccg 2779

                                                                        
Query: 279  cgagggcctcctcgtcgcccgtccacggcgccgcgcccttgtcgaggctctcgccgaggt 338
            | | |||| |||||||  ||||||||||| |  |||||| |||  | | |||||||||||
Sbjct: 2778 ccacggccgcctcgtccgccgtccacggcacgccgccctcgtcccgcccctcgccgaggt 2719

                                       
Query: 339  actcctcgtcgggggagtgcgtcgaca 365
            ||||||||||||| |||||||||||||
Sbjct: 2718 actcctcgtcgggcgagtgcgtcgaca 2692
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>gb|AC126223.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
            OSJNBb0076N15, complete sequence
          Length = 134307

 Score =  323 bits (163), Expect = 2e-85
 Identities = 241/267 (90%)
 Strand = Plus / Minus

                                                                        
Query: 99   atcatatggagatgctgttgggcacgccgcggcaggtgacccccggcggcgagctggggg 158
            |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 3384 atcagatggagatgctgttgggcacgccgcggcaggtgacccccggcggcgagctgggcg 3325

                                                                        
Query: 159  ccagcagctcgtacggcagcacccctgcgccgcaccggttccgcctgccgtggtcggcgt 218
            ||||||| ||||||||||||||||| |||||||||||||||  || ||||||||||||||
Sbjct: 3324 ccagcagttcgtacggcagcaccccggcgccgcaccggttcttccggccgtggtcggcgt 3265

                                                                        
Query: 219  tgcgcccctcgatggtctcctcggcgcggcgcacgtcggccgcgaacatgccgtgcgcct 278
            | |||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||| 
Sbjct: 3264 tccgcctctcgatggtctcctcggcgcgtcgcacatcggccgcgaacatgccgtgcgccg 3205

                                                                        
Query: 279  cgagggcctcctcgtcgcccgtccacggcgccgcgcccttgtcgaggctctcgccgaggt 338
            | | |||| |||||||  ||||||||||| |  |||||| |||  | | |||||||||||
Sbjct: 3204 ccacggccgcctcgtccgccgtccacggcacgccgccctcgtcccgcccctcgccgaggt 3145

                                       
Query: 339  actcctcgtcgggggagtgcgtcgaca 365
            ||||||||||||| |||||||||||||
Sbjct: 3144 actcctcgtcgggcgagtgcgtcgaca 3118
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>ref|XM_470535.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2718

 Score =  321 bits (162), Expect = 9e-85
 Identities = 237/262 (90%)
 Strand = Plus / Minus

                                                                        
Query: 104  atggagatgctgttgggcacgccgcggcaggtgacccccggcggcgagctgggggccagc 163
            ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 2714 atggagatgctgttgggcacgccgcggcaggtgacccccggcggcgagctgggcgccagc 2655

                                                                        
Query: 164  agctcgtacggcagcacccctgcgccgcaccggttccgcctgccgtggtcggcgttgcgc 223
            || ||||||||||||||||| |||||||||||||||  || ||||||||||||||| |||
Sbjct: 2654 agttcgtacggcagcaccccggcgccgcaccggttcttccggccgtggtcggcgttccgc 2595

                                                                        
Query: 224  ccctcgatggtctcctcggcgcggcgcacgtcggccgcgaacatgccgtgcgcctcgagg 283
            | ||||||||||||||||||||| ||||| |||||||||||||||||||||||| | | |
Sbjct: 2594 ctctcgatggtctcctcggcgcgtcgcacatcggccgcgaacatgccgtgcgccgccacg 2535

                                                                        
Query: 284  gcctcctcgtcgcccgtccacggcgccgcgcccttgtcgaggctctcgccgaggtactcc 343
            ||| |||||||  ||||||||||| |  |||||| |||  | | ||||||||||||||||
Sbjct: 2534 gccgcctcgtccgccgtccacggcacgccgccctcgtcccgcccctcgccgaggtactcc 2475

                                  
Query: 344  tcgtcgggggagtgcgtcgaca 365
            |||||||| |||||||||||||
Sbjct: 2474 tcgtcgggcgagtgcgtcgaca 2453
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>gb|AY109573.1| Zea mays CL902_1 mRNA sequence
          Length = 2739

 Score =  159 bits (80), Expect = 8e-36
 Identities = 174/208 (83%)
 Strand = Plus / Minus

                                                                        
Query: 100  tcatatggagatgctgttgggcacgccgcggcaggtgacccccggcggcgagctgggggc 159
            |||||||||||||||||| |||||||||||||| ||||     |||||||||||||| ||
Sbjct: 2596 tcatatggagatgctgttaggcacgccgcggcacgtgannnnnggcggcgagctgggcgc 2537

                                                                        
Query: 160  cagcagctcgtacggcagcacccctgcgccgcaccggttccgcctgccgtggtcggcgtt 219
            ||||||||||||||| |||||||| | |||| |||  |||  |||||  ||||| |||||
Sbjct: 2536 cagcagctcgtacggnagcaccccggggccggaccnnttcttcctgcgctggtccgcgtt 2477

                                                                        
Query: 220  gcgcccctcgatggtctcctcggcgcggcgcacgtcggccgcgaacatgccgtgcgcctc 279
             || |  |||||||  ||||||||||||||||||||||||| ||||||| |||||||| |
Sbjct: 2476 tcgactatcgatggcttcctcggcgcggcgcacgtcggccgtgaacatgtcgtgcgccgc 2417

                                        
Query: 280  gagggcctcctcgtcgcccgtccacggc 307
             | |||  |  |||||||||||||||||
Sbjct: 2416 cacggcggcagcgtcgcccgtccacggc 2389



 Score = 46.1 bits (23), Expect = 0.079
 Identities = 33/38 (86%)
 Strand = Plus / Minus

                                                  
Query: 328  ctcgccgaggtactcctcgtcgggggagtgcgtcgaca 365
            |||||||||||||||||||||     ||||||||||||
Sbjct: 2377 ctcgccgaggtactcctcgtcnnnnnagtgcgtcgaca 2340
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>ref|XM_462649.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2700

 Score =  103 bits (52), Expect = 4e-19
 Identities = 94/108 (87%)
 Strand = Plus / Minus

                                                                        
Query: 158  gccagcagctcgtacggcagcacccctgcgccgcaccggttccgcctgccgtggtcggcg 217
            |||| |||||||||||||||||| || |||||||| ||||| |||| |  | ||||||| 
Sbjct: 2642 gccatcagctcgtacggcagcacgccggcgccgcaacggttgcgccgggaggggtcggca 2583

                                                            
Query: 218  ttgcgcccctcgatggtctcctcggcgcggcgcacgtcggccgcgaac 265
            ||||||| ||||||   |||||||||||||||||||||||||||||||
Sbjct: 2582 ttgcgccgctcgatctcctcctcggcgcggcgcacgtcggccgcgaac 2535



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                           
Query: 319  gtcgaggctctcgccgaggtactcctcgtcgggggagtgcgtcgaca 365
            |||| ||| ||| ||||||||||||||||||| ||||||||| ||||
Sbjct: 2490 gtcggggcgctccccgaggtactcctcgtcggcggagtgcgtggaca 2444
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  103 bits (52), Expect = 4e-19
 Identities = 94/108 (87%)
 Strand = Plus / Minus

                                                                            
Query: 158      gccagcagctcgtacggcagcacccctgcgccgcaccggttccgcctgccgtggtcggcg 217
                |||| |||||||||||||||||| || |||||||| ||||| |||| |  | ||||||| 
Sbjct: 22283672 gccatcagctcgtacggcagcacgccggcgccgcaacggttgcgccgggaggggtcggca 22283613

                                                                
Query: 218      ttgcgcccctcgatggtctcctcggcgcggcgcacgtcggccgcgaac 265
                ||||||| ||||||   |||||||||||||||||||||||||||||||
Sbjct: 22283612 ttgcgccgctcgatctcctcctcggcgcggcgcacgtcggccgcgaac 22283565



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                               
Query: 319      gtcgaggctctcgccgaggtactcctcgtcgggggagtgcgtcgaca 365
                |||| ||| ||| ||||||||||||||||||| ||||||||| ||||
Sbjct: 22283520 gtcggggcgctccccgaggtactcctcgtcggcggagtgcgtggaca 22283474
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>emb|AL606448.3|OSJN00013 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064H22,
             complete sequence
          Length = 147214

 Score =  103 bits (52), Expect = 4e-19
 Identities = 94/108 (87%)
 Strand = Plus / Minus

                                                                         
Query: 158   gccagcagctcgtacggcagcacccctgcgccgcaccggttccgcctgccgtggtcggcg 217
             |||| |||||||||||||||||| || |||||||| ||||| |||| |  | ||||||| 
Sbjct: 34574 gccatcagctcgtacggcagcacgccggcgccgcaacggttgcgccgggaggggtcggca 34515

                                                             
Query: 218   ttgcgcccctcgatggtctcctcggcgcggcgcacgtcggccgcgaac 265
             ||||||| ||||||   |||||||||||||||||||||||||||||||
Sbjct: 34514 ttgcgccgctcgatctcctcctcggcgcggcgcacgtcggccgcgaac 34467



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                            
Query: 319   gtcgaggctctcgccgaggtactcctcgtcgggggagtgcgtcgaca 365
             |||| ||| ||| ||||||||||||||||||| ||||||||| ||||
Sbjct: 34422 gtcggggcgctccccgaggtactcctcgtcggcggagtgcgtggaca 34376
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>emb|AJ966349.1| Hordeum vulgare subsp. vulgare mRNA for lipoxygenase-like protein
            (lox gene)
          Length = 3123

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 87/102 (85%)
 Strand = Plus / Minus

                                                                        
Query: 164  agctcgtacggcagcacccctgcgccgcaccggttccgcctgccgtggtcggcgttgcgc 223
            ||||||||||||||||| || ||||| || ||||| |||| | || |||| |||||||||
Sbjct: 2836 agctcgtacggcagcacgccggcgccacagcggttgcgccgggcggggtcagcgttgcgc 2777

                                                      
Query: 224  ccctcgatggtctcctcggcgcggcgcacgtcggccgcgaac 265
            | ||||||   |||||||||||||||||| || |||||||||
Sbjct: 2776 cgctcgatctcctcctcggcgcggcgcacttccgccgcgaac 2735
to top
>ref|XM_464447.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3123

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 337  gtactcctcgtcgggggagtgcgtcgaca 365
            ||||||||||||||||||||||| |||||
Sbjct: 2653 gtactcctcgtcgggggagtgcgacgaca 2625
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                            
Query: 337     gtactcctcgtcgggggagtgcgtcgaca 365
               ||||||||||||||||||||||| |||||
Sbjct: 5277191 gtactcctcgtcgggggagtgcgacgaca 5277219
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>dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1225_F07
          Length = 142772

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                         
Query: 337  gtactcctcgtcgggggagtgcgtcgaca 365
            ||||||||||||||||||||||| |||||
Sbjct: 3494 gtactcctcgtcgggggagtgcgacgaca 3522
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>dbj|AK071915.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074B03, full
            insert sequence
          Length = 3160

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 337  gtactcctcgtcgggggagtgcgtcgaca 365
            ||||||||||||||||||||||| |||||
Sbjct: 2652 gtactcctcgtcgggggagtgcgacgaca 2624
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>dbj|AK061610.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-B01, full
            insert sequence
          Length = 2250

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 337  gtactcctcgtcgggggagtgcgtcgaca 365
            ||||||||||||||||||||||| |||||
Sbjct: 1814 gtactcctcgtcgggggagtgcgacgaca 1786
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>ref|XM_483279.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3198

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 330  cgccgaggtactcctcgtcgggggagtg 357
            ||||||||||||||||||||| ||||||
Sbjct: 2756 cgccgaggtactcctcgtcggtggagtg 2729
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>ref|XM_483276.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2775

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 330  cgccgaggtactcctcgtcgggggagtg 357
            ||||||||||||||||||||| ||||||
Sbjct: 2554 cgccgaggtactcctcgtcggtggagtg 2527
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                            
Query: 330      cgccgaggtactcctcgtcgggggagtg 357
                ||||||||||||||||||||| ||||||
Sbjct: 25242354 cgccgaggtactcctcgtcggtggagtg 25242327



 Score = 48.1 bits (24), Expect = 0.020
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                            
Query: 330      cgccgaggtactcctcgtcgggggagtg 357
                ||||||||||||||||||||| ||||||
Sbjct: 25209675 cgccgaggtactcctcgtcggtggagtg 25209702
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>dbj|AP005816.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:B1168A08
          Length = 138135

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                          
Query: 330    cgccgaggtactcctcgtcgggggagtg 357
              ||||||||||||||||||||| ||||||
Sbjct: 107477 cgccgaggtactcctcgtcggtggagtg 107450



 Score = 48.1 bits (24), Expect = 0.020
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 330   cgccgaggtactcctcgtcgggggagtg 357
             ||||||||||||||||||||| ||||||
Sbjct: 74798 cgccgaggtactcctcgtcggtggagtg 74825
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>dbj|AP006049.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0016N23
          Length = 147336

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 330   cgccgaggtactcctcgtcgggggagtg 357
             ||||||||||||||||||||| ||||||
Sbjct: 17539 cgccgaggtactcctcgtcggtggagtg 17512
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>dbj|AK066825.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075A10, full
            insert sequence
          Length = 3196

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 330  cgccgaggtactcctcgtcgggggagtg 357
            ||||||||||||||||||||| ||||||
Sbjct: 2754 cgccgaggtactcctcgtcggtggagtg 2727
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>gb|AF095896.1|AF095896 Oryza sativa lipoxygenase (CM-LOX2) mRNA, partial cds
          Length = 2232

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 330  cgccgaggtactcctcgtcgggggagtg 357
            ||||||||||||||||||||| ||||||
Sbjct: 1831 cgccgaggtactcctcgtcggtggagtg 1804
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>gb|AF095895.1|AF095895 Oryza sativa lipoxygenase (CM-LOX1) mRNA, partial cds
          Length = 2664

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 330  cgccgaggtactcctcgtcgggggagtg 357
            ||||||||||||||||||||| ||||||
Sbjct: 2239 cgccgaggtactcctcgtcggtggagtg 2212
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>dbj|D14000.1|RICL2OP Oryza sativa (japonica cultivar-group) lox2osPil mRNA for
            lipoxygenase, complete cds
          Length = 3007

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 330  cgccgaggtactcctcgtcgggggagtg 357
            ||||||||||||||||||||| ||||||
Sbjct: 2669 cgccgaggtactcctcgtcggtggagtg 2642
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>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome
          Length = 3730232

 Score = 46.1 bits (23), Expect = 0.079
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                              
Query: 176     agcacccctgcgccgcaccggttccgcctgc 206
               |||||| |||||||||| |||||||||||||
Sbjct: 3692524 agcaccgctgcgccgcagcggttccgcctgc 3692554
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>emb|AJ507213.1|HVU507213 Hordeum vulgare mRNA for lipoxygenase 2 (lox2:Hv:3 gene)
          Length = 2967

 Score = 46.1 bits (23), Expect = 0.079
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 337  gtactcctcgtcgggggagtgcg 359
            |||||||||||||||||||||||
Sbjct: 2546 gtactcctcgtcgggggagtgcg 2524
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 46.1 bits (23), Expect = 0.079
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 241     ggcgcggcgcacgtcggccgcga 263
               |||||||||||||||||||||||
Sbjct: 2389852 ggcgcggcgcacgtcggccgcga 2389874
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 46.1 bits (23), Expect = 0.079
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 304     cggcgccgcgcccttgtcgaggc 326
               |||||||||||||||||||||||
Sbjct: 1412655 cggcgccgcgcccttgtcgaggc 1412677
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 242     gcgcggcgcacgtcggccgcga 263
               ||||||||||||||||||||||
Sbjct: 3261249 gcgcggcgcacgtcggccgcga 3261270



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 304     cggcgccgcgcccttgtcgag 324
               |||||||||||||||||||||
Sbjct: 2477100 cggcgccgcgcccttgtcgag 2477120
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 242    gcgcggcgcacgtcggccgcga 263
              ||||||||||||||||||||||
Sbjct: 719576 gcgcggcgcacgtcggccgcga 719597



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 304     cggcgccgcgcccttgtcgag 324
               |||||||||||||||||||||
Sbjct: 3708665 cggcgccgcgcccttgtcgag 3708645
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 242    gcgcggcgcacgtcggccgcga 263
              ||||||||||||||||||||||
Sbjct: 528221 gcgcggcgcacgtcggccgcga 528242



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 304     cggcgccgcgcccttgtcgag 324
               |||||||||||||||||||||
Sbjct: 3448985 cggcgccgcgcccttgtcgag 3448965
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>emb|AL645799.5| Mouse DNA sequence from clone RP23-459O24 on chromosome 13, complete
             sequence
          Length = 63170

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 5     tatcaaaactacatccacaagctggc 30
             ||||||||||||| ||||||||||||
Sbjct: 11151 tatcaaaactacagccacaagctggc 11176
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>gb|AF010496.1|AF010496 Rhodobacter capsulatus strain SB1003, partial genome
          Length = 189370

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 238    ctcggcgcggcgcacgtcggcc 259
              ||||||||||||||||||||||
Sbjct: 121487 ctcggcgcggcgcacgtcggcc 121466
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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 304    cggcgccgcgcccttgtcgag 324
              |||||||||||||||||||||
Sbjct: 689995 cggcgccgcgcccttgtcgag 690015
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>gb|AY952208.1| Haliotis fulgens clone Hful369 microsatellite sequence
          Length = 434

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 108 agatgctgttgggcacgccgc 128
           |||||||||||||||||||||
Sbjct: 341 agatgctgttgggcacgccgc 361
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 238    ctcggcgcggcgcacgtcggccgcg 262
              ||||||||||||| |||||||||||
Sbjct: 627357 ctcggcgcggcgctcgtcggccgcg 627333
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>gb|AY111869.1| Zea mays CL452_-8 mRNA sequence
          Length = 568

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 100 tcatatggagatgctgttggg 120
           |||||||||||||||||||||
Sbjct: 367 tcatatggagatgctgttggg 347
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>gb|AY103567.1| Zea mays PCO116252 mRNA sequence
          Length = 3135

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 100  tcatatggagatgctgttggg 120
            |||||||||||||||||||||
Sbjct: 2900 tcatatggagatgctgttggg 2880
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>ref|NM_191084.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2859

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 329  tcgccgaggtactcctcgtc 348
            ||||||||||||||||||||
Sbjct: 2420 tcgccgaggtactcctcgtc 2401
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 278     tcgagggcctcctcgtcgcc 297
               ||||||||||||||||||||
Sbjct: 1059347 tcgagggcctcctcgtcgcc 1059328
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>ref|XM_847489.1| PREDICTED: Canis familiaris similar to 6-phosphogluconolactonase
           (LOC610090), mRNA
          Length = 1089

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 188 ccgcaccggttccgcctgcc 207
           ||||||||||||||||||||
Sbjct: 79  ccgcaccggttccgcctgcc 98
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>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 188     ccgcaccggttccgcctgcc 207
               ||||||||||||||||||||
Sbjct: 2302268 ccgcaccggttccgcctgcc 2302287
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 307     cgccgcgcccttgtcgaggctctcgccg 334
               ||||||| | ||||||||||||||||||
Sbjct: 1789063 cgccgcgacattgtcgaggctctcgccg 1789036
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>gb|AC026782.6| Homo sapiens chromosome 5 clone CTD-2015A6, complete sequence
          Length = 214025

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 20    cacaagctggcactaaataa 39
             ||||||||||||||||||||
Sbjct: 44398 cacaagctggcactaaataa 44379
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 329      tcgccgaggtactcctcgtc 348
                ||||||||||||||||||||
Sbjct: 34784231 tcgccgaggtactcctcgtc 34784212
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>dbj|AP003411.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1148D12
          Length = 132060

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 329   tcgccgaggtactcctcgtc 348
             ||||||||||||||||||||
Sbjct: 99471 tcgccgaggtactcctcgtc 99452
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>gb|AE004538.1| Pseudomonas aeruginosa PAO1, section 99 of 529 of the complete genome
          Length = 10104

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 273  gcgcctcgagggcctcctcgtcgc 296
            ||||||| ||||||||||||||||
Sbjct: 8484 gcgcctccagggcctcctcgtcgc 8461
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>dbj|AP003255.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0454H12
          Length = 161004

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 329   tcgccgaggtactcctcgtc 348
             ||||||||||||||||||||
Sbjct: 43403 tcgccgaggtactcctcgtc 43384
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>emb|BX548017.3| Mouse DNA sequence from clone RP23-335I21 on chromosome X, complete
             sequence
          Length = 77486

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 1     ggtttatcaaaactacatccacaa 24
             |||||| |||||||||||||||||
Sbjct: 43283 ggtttagcaaaactacatccacaa 43260
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 275     gcctcgagggcctcctcgtc 294
               ||||||||||||||||||||
Sbjct: 3813100 gcctcgagggcctcctcgtc 3813081
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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 237   cctcggcgcggcgcacgtcg 256
             ||||||||||||||||||||
Sbjct: 30828 cctcggcgcggcgcacgtcg 30809


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,202,512
Number of Sequences: 3902068
Number of extensions: 2202512
Number of successful extensions: 43744
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 42073
Number of HSP's gapped (non-prelim): 1663
length of query: 365
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 343
effective length of database: 17,147,199,772
effective search space: 5881489521796
effective search space used: 5881489521796
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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