Clone Name | rbastl22f08 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_468330.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2748 Score = 48.1 bits (24), Expect = 0.012 Identities = 33/36 (91%) Strand = Plus / Minus Query: 160 tcaagctctgagctcccggatgtagctggggctcat 195 ||||||||||||||| ||||||||| | |||||||| Sbjct: 2748 tcaagctctgagctcacggatgtagttagggctcat 2713
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 48.1 bits (24), Expect = 0.012 Identities = 33/36 (91%) Strand = Plus / Minus Query: 160 tcaagctctgagctcccggatgtagctggggctcat 195 ||||||||||||||| ||||||||| | |||||||| Sbjct: 34654852 tcaagctctgagctcacggatgtagttagggctcat 34654817
>dbj|AP004081.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1116_E04 Length = 94096 Score = 48.1 bits (24), Expect = 0.012 Identities = 33/36 (91%) Strand = Plus / Minus Query: 160 tcaagctctgagctcccggatgtagctggggctcat 195 ||||||||||||||| ||||||||| | |||||||| Sbjct: 11803 tcaagctctgagctcacggatgtagttagggctcat 11768
>dbj|AP003996.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1112_G06 Length = 122580 Score = 48.1 bits (24), Expect = 0.012 Identities = 33/36 (91%) Strand = Plus / Minus Query: 160 tcaagctctgagctcccggatgtagctggggctcat 195 ||||||||||||||| ||||||||| | |||||||| Sbjct: 121467 tcaagctctgagctcacggatgtagttagggctcat 121432
>dbj|AK059635.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-A08, full insert sequence Length = 876 Score = 48.1 bits (24), Expect = 0.012 Identities = 33/36 (91%) Strand = Plus / Minus Query: 160 tcaagctctgagctcccggatgtagctggggctcat 195 ||||||||||||||| ||||||||| | |||||||| Sbjct: 623 tcaagctctgagctcacggatgtagttagggctcat 588
>gb|AE017308.1| Mycoplasma mobile 163K complete genome Length = 777079 Score = 42.1 bits (21), Expect = 0.72 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 taattttacagagcaaagaat 56 ||||||||||||||||||||| Sbjct: 445569 taattttacagagcaaagaat 445589
>emb|AL773507.7| Mouse DNA sequence from clone RP23-322E14 on chromosome 4 Contains a phospholipase A2, group XIIA (Pla2g12) pseudogene, complete sequence Length = 200646 Score = 42.1 bits (21), Expect = 0.72 Identities = 21/21 (100%) Strand = Plus / Plus Query: 37 aattttacagagcaaagaata 57 ||||||||||||||||||||| Sbjct: 33060 aattttacagagcaaagaata 33080
>dbj|AK134369.1| Mus musculus 13 days embryo male testis cDNA, RIKEN full-length enriched library, clone:6030446C19 product:hypothetical ARM repeat fold containing protein, full insert sequence Length = 3527 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 taattttacagagcaaagaa 55 |||||||||||||||||||| Sbjct: 653 taattttacagagcaaagaa 672
>gb|AC102462.19| Mus musculus chromosome 1, clone RP24-327F2, complete sequence Length = 141794 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 taattttacagagcaaagaa 55 |||||||||||||||||||| Sbjct: 135900 taattttacagagcaaagaa 135919
>gb|AY111893.1| Zea mays CL16453_1 mRNA sequence Length = 633 Score = 40.1 bits (20), Expect = 2.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 160 tcaagctctgagctcccggatgtagctg 187 ||||||| | |||||||||||||||||| Sbjct: 335 tcaagctatcagctcccggatgtagctg 362
>emb|BX322793.7| Zebrafish DNA sequence from clone CH211-208I8 in linkage group 9, complete sequence Length = 192039 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 aattttacagagcaaagaat 56 |||||||||||||||||||| Sbjct: 13196 aattttacagagcaaagaat 13177 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,564,740 Number of Sequences: 3902068 Number of extensions: 1564740 Number of successful extensions: 115255 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 115182 Number of HSP's gapped (non-prelim): 73 length of query: 222 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 200 effective length of database: 17,147,199,772 effective search space: 3429439954400 effective search space used: 3429439954400 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)