ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl22f06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GLMU_PROMA (Q7VBP2) Bifunctional protein glmU [Includes: UDP-N-a... 29 3.3

>GLMU_PROMA (Q7VBP2) Bifunctional protein glmU [Includes:|
           UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23)
           (N-acetylglucosamine-1-phosphate uridyltransferase);
           Glucosamine-1-phosphate N-acetyltransferase (EC
           2.3.1.157)]
          Length = 452

 Score = 29.3 bits (64), Expect = 3.3
 Identities = 16/31 (51%), Positives = 19/31 (61%)
 Frame = +3

Query: 3   ARLNQPSGYIQ*KVFFNCHNSIQKFILGRGC 95
           ARL+ PSGY   +VF N H  I+K I  R C
Sbjct: 131 ARLSNPSGYG--RVFSNEHGHIEKIIEDRDC 159


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,556,042
Number of Sequences: 219361
Number of extensions: 127501
Number of successful extensions: 292
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 290
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 292
length of database: 80,573,946
effective HSP length: 7
effective length of database: 79,038,419
effective search space used: 1896922056
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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