>gb|AC105772.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1504_G04,
             complete sequence
          Length = 88812

 Score =  101 bits (51), Expect = 2e-18
 Identities = 66/71 (92%)
 Strand = Plus / Minus

                                                                         
Query: 311   tgaagaggtggaaggggaagttgccgttcttgtccatcaatggctccaccagcttggcga 370
             ||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 35863 tgaagaggtggtaggggaagttgccgttcttgtccgtcaatggctccaccatcttggcga 35804

                        
Query: 371   tccccagcatc 381
             | ||| |||||
Sbjct: 35803 ttccccgcatc 35793

>gb|AC016779.5| Genomic sequence for Oryza sativa clone 10N6, complete sequence
          Length = 140234

 Score =  101 bits (51), Expect = 2e-18
 Identities = 66/71 (92%)
 Strand = Plus / Plus

                                                                          
Query: 311    tgaagaggtggaaggggaagttgccgttcttgtccatcaatggctccaccagcttggcga 370
              ||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 110076 tgaagaggtggtaggggaagttgccgttcttgtccgtcaatggctccaccatcttggcga 110135

                         
Query: 371    tccccagcatc 381
              | ||| |||||
Sbjct: 110136 ttccccgcatc 110146

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  101 bits (51), Expect = 2e-18
 Identities = 66/71 (92%)
 Strand = Plus / Minus

                                                                           
Query: 311     tgaagaggtggaaggggaagttgccgttcttgtccatcaatggctccaccagcttggcga 370
               ||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 2757537 tgaagaggtggtaggggaagttgccgttcttgtccgtcaatggctccaccatcttggcga 2757478

                          
Query: 371     tccccagcatc 381
               | ||| |||||
Sbjct: 2757477 ttccccgcatc 2757467

>gb|AC145919.3| Pan troglodytes BAC clone RP43-10A14 from 7, complete sequence
          Length = 174235

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 315    gaggtggaaggggaagttgcc 335
              |||||||||||||||||||||
Sbjct: 115335 gaggtggaaggggaagttgcc 115315

>gb|AC148297.3| Pan troglodytes BAC clone CH251-542K24 from chromosome 7, complete
             sequence
          Length = 192516

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 315   gaggtggaaggggaagttgcc 335
             |||||||||||||||||||||
Sbjct: 82103 gaggtggaaggggaagttgcc 82083

>gb|AC096679.3| Pan troglodytes clone RP43-142I13, complete sequence
          Length = 194020

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 315    gaggtggaaggggaagttgcc 335
              |||||||||||||||||||||
Sbjct: 149630 gaggtggaaggggaagttgcc 149610

>gb|AC123842.4| Mus musculus BAC clone RP23-400N18 from chromosome 10, complete
             sequence
          Length = 200997

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 154   agaggcatcgtcgtcttgtt 173
             ||||||||||||||||||||
Sbjct: 36967 agaggcatcgtcgtcttgtt 36948

>gb|AC122246.5| Mus musculus BAC clone RP23-152K13 from 1, complete sequence
          Length = 203739

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 271    tctgccctggagctgctgcc 290
              ||||||||||||||||||||
Sbjct: 164353 tctgccctggagctgctgcc 164334

>ref|XM_857079.1| PREDICTED: Canis familiaris similar to Microtubule-associated protein
            1B (MAP 1B), transcript variant 2 (LOC478092), mRNA
          Length = 8450

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 309  gctgaagaggtggaagggga 328
            ||||||||||||||||||||
Sbjct: 4721 gctgaagaggtggaagggga 4702

>ref|XM_535269.2| PREDICTED: Canis familiaris similar to Microtubule-associated protein
            1B (MAP 1B), transcript variant 1 (LOC478092), mRNA
          Length = 9096

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 309  gctgaagaggtggaagggga 328
            ||||||||||||||||||||
Sbjct: 5367 gctgaagaggtggaagggga 5348

>emb|BX649634.8| Zebrafish DNA sequence from clone CH211-284G18 in linkage group 2,
              complete sequence
          Length = 154030

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 242    gaccagcagtcagatacaac 261
              ||||||||||||||||||||
Sbjct: 119820 gaccagcagtcagatacaac 119801

>gb|AC116309.2| Homo sapiens chromosome 5 clone RP11-106J9, complete sequence
          Length = 176112

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 117   gaagaaaagaagaggtaatt 136
             ||||||||||||||||||||
Sbjct: 10588 gaagaaaagaagaggtaatt 10607

>gb|AC124476.5| Mus musculus BAC clone RP24-93F9 from chromosome 10, complete
            sequence
          Length = 169031

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 154  agaggcatcgtcgtcttgtt 173
            ||||||||||||||||||||
Sbjct: 8569 agaggcatcgtcgtcttgtt 8588

>gb|AC008268.3|AC008268 Homo sapiens BAC clone RP11-34G16 from 2, complete sequence
          Length = 187883

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 262   gcagcgagctctgccctggagctgctgc 289
             |||| |||| ||||||||||||||||||
Sbjct: 18243 gcagagagcactgccctggagctgctgc 18216

>emb|AL935291.6| Zebrafish DNA sequence from clone CH211-226M23 in linkage group 1,
              complete sequence
          Length = 174091

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 160    atcgtcgtcttgtttgtcct 179
              ||||||||||||||||||||
Sbjct: 105885 atcgtcgtcttgtttgtcct 105866

>emb|AL929546.8| Mouse DNA sequence from clone RP23-402K10 on chromosome 2, complete
             sequence
          Length = 130361

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 170   tgtttgtccttctctcaagg 189
             ||||||||||||||||||||
Sbjct: 76142 tgtttgtccttctctcaagg 76123


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,259,608
Number of Sequences: 3902068
Number of extensions: 3259608
Number of successful extensions: 64418
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 64369
Number of HSP's gapped (non-prelim): 49
length of query: 381
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 359
effective length of database: 17,147,199,772
effective search space: 6155844718148
effective search space used: 6155844718148
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)