ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl22e04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12) 79 2e-15
2LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12) 72 4e-13
3LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygena... 71 5e-13
4LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase... 66 2e-11
5LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12) 62 3e-10
6LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94) 50 1e-06
7LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12) 50 2e-06
8LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12) 48 6e-06
9LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12) 48 6e-06
10LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2) 47 8e-06
11LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12) 47 1e-05
12LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12) 45 3e-05
13LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1) 45 3e-05
14LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3) 45 4e-05
15LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12) 45 5e-05
16LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12) 44 7e-05
17LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12) 43 2e-04
18LOXB_PHAVU (P27481) Lipoxygenase (EC 1.13.11.12) (Fragment) 42 4e-04
19LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12) 41 6e-04
20LOX23_HORVU (Q8GSM2) Lipoxygenase 2.3, chloroplast precursor (EC... 37 0.015
21LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12) 36 0.025
22LOX5_ORYSA (Q7XV13) Putative lipoxygenase 5 (EC 1.13.11.12) 35 0.043
23LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC... 34 0.074
24LOXC1_ORYSA (P38419) Lipoxygenase 7, chloroplast precursor (EC 1... 33 0.22
25LOXC2_ORYSA (Q84YK8) Probable lipoxygenase 8, chloroplast precur... 32 0.28
26LOXC_ARATH (P38418) Lipoxygenase, chloroplast precursor (EC 1.13... 32 0.37
27SYP_MYCTU (O05814) Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline... 31 0.63
28SEPP1_PONPY (Q5R8W9) Selenoprotein P precursor (SeP) 30 1.1
29SEPP1_HUMAN (P49908) Selenoprotein P precursor (SeP) 30 1.1
30LOX22_HORVU (Q8GSM3) Lipoxygenase 2.2, chloroplast precursor (EC... 30 1.8
31FOXJ3_MOUSE (Q8BUR3) Forkhead box protein J3 29 2.4
32FRIZ3_DROME (O77438) Protein frizzled-3 precursor (dFz3) 29 3.1
33ALR1_SALTY (P0A1A3) Alanine racemase, biosynthetic (EC 5.1.1.1) 28 5.3
34ALR1_SALTI (P0A1A4) Alanine racemase, biosynthetic (EC 5.1.1.1) 28 5.3
35NOTC2_MOUSE (O35516) Neurogenic locus notch homolog protein 2 pr... 28 5.3
36NOTC2_HUMAN (Q04721) Neurogenic locus notch homolog protein 2 pr... 28 5.3
37CB024_HUMAN (Q9BV87) Protein C2orf24 28 6.9
38ARNT_RAT (P41739) Aryl hydrocarbon receptor nuclear translocator... 27 9.1
39THII_HALSA (Q9HQ72) Probable thiamine biosynthesis protein thiI 27 9.1
40KPTA_BURS3 (Q395F2) Probable RNA 2'-phosphotransferase (EC 2.7.-.-) 27 9.1

>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)|
          Length = 862

 Score = 79.3 bits (194), Expect = 2e-15
 Identities = 36/42 (85%), Positives = 38/42 (90%)
 Frame = -3

Query: 387 PQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 262
           P+LKNR GPAKFPYMLLYPNTSDH G A GLTA+GIPNSISI
Sbjct: 821 PELKNRNGPAKFPYMLLYPNTSDHKGAAAGLTAKGIPNSISI 862



to top

>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)|
          Length = 866

 Score = 71.6 bits (174), Expect = 4e-13
 Identities = 33/40 (82%), Positives = 36/40 (90%)
 Frame = -3

Query: 381 LKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 262
           LKNR GPA+FPYMLLYPNTSD TG A G+TA+GIPNSISI
Sbjct: 827 LKNRNGPAEFPYMLLYPNTSDVTGAAAGITAKGIPNSISI 866



to top

>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)|
          Length = 863

 Score = 71.2 bits (173), Expect = 5e-13
 Identities = 32/42 (76%), Positives = 36/42 (85%)
 Frame = -3

Query: 387 PQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 262
           P LKNR GPA FPY L++PNTSD+ G AEG+TARGIPNSISI
Sbjct: 822 PLLKNRVGPANFPYTLMFPNTSDNKGAAEGITARGIPNSISI 863



to top

>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)|
          Length = 870

 Score = 66.2 bits (160), Expect = 2e-11
 Identities = 31/42 (73%), Positives = 32/42 (76%)
 Frame = -3

Query: 387 PQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 262
           P  KNR GP  FPY LLYPNTSD  G A GL+ARGIPNSISI
Sbjct: 829 PHRKNRVGPTNFPYTLLYPNTSDLKGDAAGLSARGIPNSISI 870



to top

>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)|
          Length = 877

 Score = 62.0 bits (149), Expect = 3e-10
 Identities = 31/41 (75%), Positives = 33/41 (80%), Gaps = 1/41 (2%)
 Frame = -3

Query: 381 LKNRTGPAKFPYMLLYPNTSDHTGQ-AEGLTARGIPNSISI 262
           LKNR GP K PYMLLYPNTSD T +  +GLTA GIPNSISI
Sbjct: 837 LKNRNGPVKMPYMLLYPNTSDVTKEKGQGLTAMGIPNSISI 877



to top

>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)|
          Length = 853

 Score = 50.4 bits (119), Expect = 1e-06
 Identities = 26/40 (65%), Positives = 29/40 (72%)
 Frame = -3

Query: 381 LKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 262
           L+NR GPAK PY LLYP++       EGLT RGIPNSISI
Sbjct: 820 LRNRYGPAKMPYTLLYPSSE------EGLTFRGIPNSISI 853



to top

>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)|
          Length = 866

 Score = 49.7 bits (117), Expect = 2e-06
 Identities = 25/40 (62%), Positives = 28/40 (70%)
 Frame = -3

Query: 381 LKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 262
           L+NR GP K PY LLYP++       EGLT RGIPNSISI
Sbjct: 833 LRNRYGPVKMPYTLLYPSSE------EGLTCRGIPNSISI 866



to top

>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)|
          Length = 861

 Score = 47.8 bits (112), Expect = 6e-06
 Identities = 24/41 (58%), Positives = 29/41 (70%)
 Frame = -3

Query: 384 QLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 262
           +L+NR GP + PY LLYP++       EGLT RGIPNSISI
Sbjct: 827 KLRNRHGPVEMPYTLLYPSSK------EGLTFRGIPNSISI 861



to top

>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)|
          Length = 864

 Score = 47.8 bits (112), Expect = 6e-06
 Identities = 24/42 (57%), Positives = 27/42 (64%)
 Frame = -3

Query: 387 PQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 262
           P L+NRTGP + PY LL      H    EGLT +GIPNSISI
Sbjct: 829 PSLRNRTGPVQLPYTLL------HRSSEEGLTFKGIPNSISI 864



to top

>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)|
          Length = 865

 Score = 47.4 bits (111), Expect = 8e-06
 Identities = 24/40 (60%), Positives = 27/40 (67%)
 Frame = -3

Query: 381 LKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 262
           L NR GP + PY LL+PN       +EGLT RGIPNSISI
Sbjct: 833 LSNRLGPVQLPYTLLHPN-------SEGLTCRGIPNSISI 865



to top

>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)|
          Length = 862

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 24/40 (60%), Positives = 26/40 (65%)
 Frame = -3

Query: 381 LKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 262
           L+NR GP K PY +L P   D     EGLT RGIPNSISI
Sbjct: 828 LRNRNGPVKMPYTVLLPTCED-----EGLTFRGIPNSISI 862



to top

>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)|
          Length = 864

 Score = 45.4 bits (106), Expect = 3e-05
 Identities = 23/42 (54%), Positives = 28/42 (66%)
 Frame = -3

Query: 387 PQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 262
           P L +R GP + PY LL+P++       EGLT RGIPNSISI
Sbjct: 829 PSLYHRVGPVQLPYTLLHPSSK------EGLTFRGIPNSISI 864



to top

>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)|
          Length = 839

 Score = 45.4 bits (106), Expect = 3e-05
 Identities = 23/38 (60%), Positives = 26/38 (68%)
 Frame = -3

Query: 375 NRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 262
           NR GP + PY LLYP++       EGLT RGIPNSISI
Sbjct: 808 NRLGPVQLPYTLLYPSSE------EGLTFRGIPNSISI 839



to top

>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)|
          Length = 857

 Score = 45.1 bits (105), Expect = 4e-05
 Identities = 23/41 (56%), Positives = 28/41 (68%)
 Frame = -3

Query: 384 QLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 262
           +L+NR GP + PY LL P++       EGLT RGIPNSISI
Sbjct: 823 KLRNRCGPVQMPYTLLLPSSK------EGLTFRGIPNSISI 857



to top

>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)|
          Length = 859

 Score = 44.7 bits (104), Expect = 5e-05
 Identities = 21/39 (53%), Positives = 26/39 (66%)
 Frame = -3

Query: 378 KNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 262
           KNR+GP   PY LL+P +       EGLT +GIPNS+SI
Sbjct: 827 KNRSGPVNVPYTLLFPTSE------EGLTGKGIPNSVSI 859



to top

>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)|
          Length = 859

 Score = 44.3 bits (103), Expect = 7e-05
 Identities = 22/40 (55%), Positives = 27/40 (67%)
 Frame = -3

Query: 381 LKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 262
           LKNRTG  K PY LL+P++        G+T RGIPNS+SI
Sbjct: 826 LKNRTGLVKMPYTLLFPSSEG------GVTGRGIPNSVSI 859



to top

>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)|
          Length = 860

 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 21/40 (52%), Positives = 25/40 (62%)
 Frame = -3

Query: 381 LKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 262
           L NRTGP   PY LL+P +        GLT +GIPNS+SI
Sbjct: 827 LTNRTGPVNAPYTLLFPTSEG------GLTGKGIPNSVSI 860



to top

>LOXB_PHAVU (P27481) Lipoxygenase (EC 1.13.11.12) (Fragment)|
          Length = 741

 Score = 42.0 bits (97), Expect = 4e-04
 Identities = 21/34 (61%), Positives = 24/34 (70%)
 Frame = -3

Query: 381 LKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGI 280
           L+NRTGPAK PY LLYP++       EGLT RGI
Sbjct: 714 LRNRTGPAKMPYTLLYPSSE------EGLTFRGI 741



to top

>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)|
          Length = 861

 Score = 41.2 bits (95), Expect = 6e-04
 Identities = 20/40 (50%), Positives = 25/40 (62%)
 Frame = -3

Query: 381 LKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 262
           L NR+GP   PY LL+P +        GLT +GIPNS+SI
Sbjct: 828 LTNRSGPVNAPYTLLFPTSEG------GLTGKGIPNSVSI 861



to top

>LOX23_HORVU (Q8GSM2) Lipoxygenase 2.3, chloroplast precursor (EC 1.13.11.12)|
           (LOX2:Hv:3)
          Length = 896

 Score = 36.6 bits (83), Expect = 0.015
 Identities = 21/42 (50%), Positives = 24/42 (57%)
 Frame = -3

Query: 387 PQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 262
           P+ KNR G    PY LL P +        G+T RGIPNSISI
Sbjct: 861 PENKNRCGAGIVPYELLKPFSEP------GVTGRGIPNSISI 896



to top

>LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12)|
          Length = 918

 Score = 35.8 bits (81), Expect = 0.025
 Identities = 19/39 (48%), Positives = 23/39 (58%)
 Frame = -3

Query: 378 KNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 262
           KNR G    PY LL P++        G+T RG+PNSISI
Sbjct: 886 KNRCGAGVLPYELLAPSSPP------GVTCRGVPNSISI 918



to top

>LOX5_ORYSA (Q7XV13) Putative lipoxygenase 5 (EC 1.13.11.12)|
          Length = 899

 Score = 35.0 bits (79), Expect = 0.043
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = -3

Query: 387 PQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 262
           P  +NR G    PY L+ P++        G+T RG+PNS++I
Sbjct: 864 PSRRNRCGAGVLPYELMAPSSGP------GITCRGVPNSVTI 899



to top

>LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC 1.13.11.12)|
            (LOX-100) (LOX2:Hv:1)
          Length = 936

 Score = 34.3 bits (77), Expect = 0.074
 Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
 Frame = -3

Query: 387  PQLKNRTGPAKFPYMLLYPNTSDHTG----QAEGLTARGIPNSISI 262
            P  KNR G    PY+LL P+  D T       + +   GIPNSISI
Sbjct: 891  PDRKNRHGAGMVPYVLLRPSDGDPTDGDPTDEKMVMEMGIPNSISI 936



to top

>LOXC1_ORYSA (P38419) Lipoxygenase 7, chloroplast precursor (EC 1.13.11.12)|
          Length = 924

 Score = 32.7 bits (73), Expect = 0.22
 Identities = 18/41 (43%), Positives = 22/41 (53%)
 Frame = -3

Query: 384 QLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 262
           +LKNR G    PY L+ P +        G+T  GIPNS SI
Sbjct: 890 KLKNRCGAGILPYQLMKPFSD------SGVTGMGIPNSTSI 924



to top

>LOXC2_ORYSA (Q84YK8) Probable lipoxygenase 8, chloroplast precursor (EC|
            1.13.11.12)
          Length = 941

 Score = 32.3 bits (72), Expect = 0.28
 Identities = 18/41 (43%), Positives = 22/41 (53%)
 Frame = -3

Query: 384  QLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 262
            +LKNR G    PY L+ P +        G+T  GIPNS SI
Sbjct: 907  KLKNRCGAGILPYQLMKPFSD------AGVTGMGIPNSTSI 941



to top

>LOXC_ARATH (P38418) Lipoxygenase, chloroplast precursor (EC 1.13.11.12)|
          Length = 896

 Score = 32.0 bits (71), Expect = 0.37
 Identities = 20/40 (50%), Positives = 23/40 (57%)
 Frame = -3

Query: 381 LKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 262
           LKNR G     Y LL P TS+H     G+T  G+P SISI
Sbjct: 863 LKNRAGAGVVKYELLKP-TSEH-----GVTGMGVPYSISI 896



to top

>SYP_MYCTU (O05814) Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline--tRNA|
           ligase) (ProRS)
          Length = 582

 Score = 31.2 bits (69), Expect = 0.63
 Identities = 20/40 (50%), Positives = 23/40 (57%)
 Frame = +1

Query: 241 TTDVLRSDGYAVRDAPGGEPLGLSRVVGGVWVEQHVWELG 360
           T DVL  DG  VR   G   +G+SR+V  V  EQH  ELG
Sbjct: 438 TADVLGEDGKPVRLTMGSYGIGVSRLV-AVVAEQHHDELG 476



to top

>SEPP1_PONPY (Q5R8W9) Selenoprotein P precursor (SeP)|
          Length = 381

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 15/30 (50%), Positives = 16/30 (53%)
 Frame = -2

Query: 364 AGQVPIHAALPKHLRPHGTGRGAHRQGHPE 275
           A   P H A P  L  H   +G HRQGHPE
Sbjct: 231 APDAPTHPA-PPGLHHHHKHKGQHRQGHPE 259



to top

>SEPP1_HUMAN (P49908) Selenoprotein P precursor (SeP)|
          Length = 381

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 15/30 (50%), Positives = 16/30 (53%)
 Frame = -2

Query: 364 AGQVPIHAALPKHLRPHGTGRGAHRQGHPE 275
           A   P H A P  L  H   +G HRQGHPE
Sbjct: 231 APNAPTHPA-PPGLHHHHKHKGQHRQGHPE 259



to top

>LOX22_HORVU (Q8GSM3) Lipoxygenase 2.2, chloroplast precursor (EC 1.13.11.12)|
            (LOX2:Hv:2)
          Length = 932

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 17/39 (43%), Positives = 23/39 (58%)
 Frame = -3

Query: 378  KNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 262
            +NR G    PY+LL P  + +   A+ +   GIPNSISI
Sbjct: 895  RNRHGAGVVPYVLLRP-LNGNPMDAKTVMEMGIPNSISI 932



to top

>FOXJ3_MOUSE (Q8BUR3) Forkhead box protein J3|
          Length = 623

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 4/47 (8%)
 Frame = -2

Query: 388 PAAQEPHRAGQVPIHAALPKHLRPHGTGRG----AHRQGHPEQHIHL 260
           P+   PHR   +P H   P+H  PH          H Q HP  H H+
Sbjct: 380 PSPHTPHRPHGLPQHPQRPQHPAPHPQQHSQLQPPHSQ-HPPPHQHI 425



to top

>FRIZ3_DROME (O77438) Protein frizzled-3 precursor (dFz3)|
          Length = 581

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 5/72 (6%)
 Frame = -3

Query: 345 MLLYPNTSDHTGQ--AEGLTARGIPNSISI*SEHVRR---RDLMLLCYPCLLTPELACVC 181
           M   PN + HT Q  AE   A+ +P   S  S   R      L  LC P +  P  AC  
Sbjct: 55  MTALPNLAGHTNQLEAELQIAKLVPLIESGCSRRARFLLCSSLFPLCTPDVPRPVAACKL 114

Query: 180 VCDRELCRCMNN 145
           +C+     CM N
Sbjct: 115 LCETVRGECMEN 126



to top

>ALR1_SALTY (P0A1A3) Alanine racemase, biosynthetic (EC 5.1.1.1)|
          Length = 359

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 16/36 (44%), Positives = 18/36 (50%)
 Frame = +1

Query: 253 LRSDGYAVRDAPGGEPLGLSRVVGGVWVEQHVWELG 360
           L S   AVRD   GEP+G     GG WV +    LG
Sbjct: 237 LTSSLIAVRDHKAGEPVG----YGGTWVSERDTRLG 268



to top

>ALR1_SALTI (P0A1A4) Alanine racemase, biosynthetic (EC 5.1.1.1)|
          Length = 359

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 16/36 (44%), Positives = 18/36 (50%)
 Frame = +1

Query: 253 LRSDGYAVRDAPGGEPLGLSRVVGGVWVEQHVWELG 360
           L S   AVRD   GEP+G     GG WV +    LG
Sbjct: 237 LTSSLIAVRDHKAGEPVG----YGGTWVSERDTRLG 268



to top

>NOTC2_MOUSE (O35516) Neurogenic locus notch homolog protein 2 precursor (Notch|
           2) (Motch B) [Contains: Notch 2 extracellular
           truncation; Notch 2 intracellular domain]
          Length = 2470

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 7/53 (13%)
 Frame = -3

Query: 189 CVCV-------CDRELCRCMNN*GNKGACTTGLIGMRKLSSAGYRSMHRRVQK 52
           C+C        C  ++  C++N    G CT GL G + L  AG+  ++  V K
Sbjct: 704 CICPEGPHHPSCYSQVNECLSNPCIHGNCTGGLSGYKCLCDAGWVGVNCEVDK 756



to top

>NOTC2_HUMAN (Q04721) Neurogenic locus notch homolog protein 2 precursor (Notch|
           2) (hN2) [Contains: Notch 2 extracellular truncation;
           Notch 2 intracellular domain]
          Length = 2471

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 7/53 (13%)
 Frame = -3

Query: 189 CVCV-------CDRELCRCMNN*GNKGACTTGLIGMRKLSSAGYRSMHRRVQK 52
           C+C        C  ++  C++N    G CT GL G + L  AG+  ++  V K
Sbjct: 706 CICPEGPHHPSCYSQVNECLSNPCIHGNCTGGLSGYKCLCDAGWVGINCEVDK 758



to top

>CB024_HUMAN (Q9BV87) Protein C2orf24|
          Length = 410

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
 Frame = -3

Query: 273 SISI*SEHVRRRDLMLLCYPCLLTPELACVCVCDRELC-----RCMNN*GNKGACTTGLI 109
           ++++ S  V  + L L C P    P+L     C  E C     +C+ +  N  +C  G +
Sbjct: 244 ALAVASVAVIHQSLGLSCTPTPGPPDLGLTSRCLLEPCIPSVPQCLPSPANVSSCLEGSM 303

Query: 108 GMRKL 94
           G+R L
Sbjct: 304 GLRSL 308



to top

>ARNT_RAT (P41739) Aryl hydrocarbon receptor nuclear translocator (ARNT|
           protein) (Dioxin receptor, nuclear translocator)
           (Hypoxia-inducible factor 1 beta) (HIF-1 beta)
          Length = 800

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
 Frame = -2

Query: 295 HRQGHPEQHIHLI*ARPSSRPHAF--VLSLL 209
           HR    EQH+    A+PSS+P  F  +LS+L
Sbjct: 747 HRSSSNEQHVQPTSAQPSSQPEVFQEMLSML 777



to top

>THII_HALSA (Q9HQ72) Probable thiamine biosynthesis protein thiI|
          Length = 392

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 5/37 (13%)
 Frame = +1

Query: 277 RDAPGGEPLG-----LSRVVGGVWVEQHVWELGRPGA 372
           RD PGG PLG     ++ V GG+      WE  R GA
Sbjct: 170 RDGPGGMPLGTQQPLVALVSGGIDSPVAAWESMRRGA 206



to top

>KPTA_BURS3 (Q395F2) Probable RNA 2'-phosphotransferase (EC 2.7.-.-)|
          Length = 194

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +1

Query: 94  ELPHADQTRRARTLIALIIHAPAQLSV 174
           ELP  D TR +RTL  L+ HAP  + +
Sbjct: 7   ELPAPDATRISRTLSYLLRHAPQTIGL 33


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,837,357
Number of Sequences: 219361
Number of extensions: 1256032
Number of successful extensions: 3349
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 3205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3321
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 1380984984
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top