ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl22d08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1KI13A_HUMAN (Q9H1H9) Kinesin-like protein KIF13A (Kinesin-like p... 29 3.9
2NIN_HUMAN (Q8N4C6) Ninein (hNinein) 28 8.8

>KI13A_HUMAN (Q9H1H9) Kinesin-like protein KIF13A (Kinesin-like protein RBKIN)|
          Length = 1805

 Score = 28.9 bits (63), Expect = 3.9
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = +1

Query: 16  IHEHKEQAEYLKQPTNKIEIMKAPKLT*KTCGEKKICTSLT 138
           I E +E+ E L++  ++ E MKAP+L  K    +K+   LT
Sbjct: 367 IRELREEVEKLREQLSQAEAMKAPELKEKLEESEKLIKELT 407



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>NIN_HUMAN (Q8N4C6) Ninein (hNinein)|
          Length = 2090

 Score = 27.7 bits (60), Expect = 8.8
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +1

Query: 4    VHHFIHEHKEQAEYLKQPTNKIEIMKAPKL 93
            VHH I E K++ +YL+  T  +E +KA ++
Sbjct: 1380 VHHVIEECKQENQYLEGNTQLLEKVKAHEI 1409


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,172,612
Number of Sequences: 219361
Number of extensions: 328952
Number of successful extensions: 1037
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1019
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1036
length of database: 80,573,946
effective HSP length: 35
effective length of database: 72,896,311
effective search space used: 1749511464
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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