>gb|AF478368.1| Vitis vinifera isolate 4B2 copia-like retrotransposon gag-pol
            polyprotein-like gene, partial sequence; and long
            terminal repeat, complete sequence
          Length = 1590

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 7    taccataacagtcttaaca 25
            |||||||||||||||||||
Sbjct: 1187 taccataacagtcttaaca 1205

>gb|AC102839.24| Mus musculus chromosome 5, clone RP24-343D8, complete sequence
          Length = 196090

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 6      ctaccataacagtcttaac 24
              |||||||||||||||||||
Sbjct: 153543 ctaccataacagtcttaac 153525

>gb|AC105335.27| Mus musculus chromosome 5, clone RP23-377H14, complete sequence
          Length = 171789

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 6      ctaccataacagtcttaac 24
              |||||||||||||||||||
Sbjct: 144669 ctaccataacagtcttaac 144687

>gb|M38182.1|SQLCVE Squash leaf curl virus circular viral B component DNA
          Length = 2607

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 13  aacagtcttaacatagcta 31
           |||||||||||||||||||
Sbjct: 962 aacagtcttaacatagcta 944


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 493,044
Number of Sequences: 3902068
Number of extensions: 493044
Number of successful extensions: 27952
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 27948
Number of HSP's gapped (non-prelim): 4
length of query: 128
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 107
effective length of database: 17,151,101,840
effective search space: 1835167896880
effective search space used: 1835167896880
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)