ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl22c07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PWP1_YEAST (P21304) Periodic tryptophan protein 1 30 1.3

>PWP1_YEAST (P21304) Periodic tryptophan protein 1|
          Length = 576

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = -3

Query: 234 TSIVKSHHPMVYTQVRHEEYTRPLIYSCSVIHVGRLLNVSAPNPARS 94
           T  + +HH      + H +Y R ++ S S  H  +L ++++ N ARS
Sbjct: 278 TGHITTHHTDAVLSMAHNKYFRSVLASTSADHTVKLWDLNSGNAARS 324


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,967,986
Number of Sequences: 219361
Number of extensions: 539094
Number of successful extensions: 1365
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1350
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1365
length of database: 80,573,946
effective HSP length: 56
effective length of database: 68,289,730
effective search space used: 1638953520
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top