>gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete genome
          Length = 2201561

 Score = 40.1 bits (20), Expect = 0.21
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 5     taaaaattatagttcaatac 24
             ||||||||||||||||||||
Sbjct: 82292 taaaaattatagttcaatac 82311

>gb|AC132833.10| Mus musculus chromosome 15, clone RP24-498G7, complete sequence
          Length = 154206

 Score = 38.2 bits (19), Expect = 0.84
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 3     tctaaaaattatagttcaa 21
             |||||||||||||||||||
Sbjct: 94121 tctaaaaattatagttcaa 94103

>emb|CR388071.10| Zebrafish DNA sequence from clone DKEY-25M22 in linkage group 14,
             complete sequence
          Length = 189098

 Score = 38.2 bits (19), Expect = 0.84
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 17    ttcaatactcccatcatac 35
             |||||||||||||||||||
Sbjct: 26872 ttcaatactcccatcatac 26890

>emb|AL591344.1| Human DNA sequence from clone RP11-260H5 on chromosome 6 Contains the
             3' end of the gene for RU2 (RU2S), complete sequence
          Length = 63676

 Score = 38.2 bits (19), Expect = 0.84
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 5     taaaaattatagttcaata 23
             |||||||||||||||||||
Sbjct: 59675 taaaaattatagttcaata 59657

>emb|AL353679.18| Human DNA sequence from clone RP3-418C23 on chromosome 6 Contains the
             5'end of a novel gene, a novel gene and a CpG island,
             complete sequence
          Length = 100111

 Score = 38.2 bits (19), Expect = 0.84
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 3     tctaaaaattatagttcaa 21
             |||||||||||||||||||
Sbjct: 11363 tctaaaaattatagttcaa 11381

>gb|AC091073.3|AC091073 Homo sapiens chromosome 15 clone RP11-138E16 map 15q21.1, complete
             sequence
          Length = 194350

 Score = 38.2 bits (19), Expect = 0.84
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 2     ctctaaaaattatagttca 20
             |||||||||||||||||||
Sbjct: 67408 ctctaaaaattatagttca 67390

>gb|AC108415.10| Mus musculus chromosome 15, clone RP23-341K14, complete sequence
          Length = 194640

 Score = 38.2 bits (19), Expect = 0.84
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 3     tctaaaaattatagttcaa 21
             |||||||||||||||||||
Sbjct: 14659 tctaaaaattatagttcaa 14641

>gb|AC107678.14| Mus musculus chromosome 1, clone RP23-252K18, complete sequence
          Length = 169766

 Score = 36.2 bits (18), Expect = 3.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 8      aaattatagttcaatact 25
              ||||||||||||||||||
Sbjct: 123858 aaattatagttcaatact 123841

>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 36.2 bits (18), Expect = 3.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 18      tcaatactcccatcatac 35
               ||||||||||||||||||
Sbjct: 1754044 tcaatactcccatcatac 1754061

>gb|AC125182.3| Mus musculus BAC clone RP23-293D23 from 15, complete sequence
          Length = 169841

 Score = 36.2 bits (18), Expect = 3.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 8     aaattatagttcaatact 25
             ||||||||||||||||||
Sbjct: 89349 aaattatagttcaatact 89366

>emb|BX324223.23| Zebrafish DNA sequence from clone CH211-217F24 in linkage group 21,
              complete sequence
          Length = 223297

 Score = 36.2 bits (18), Expect = 3.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 6      aaaaattatagttcaata 23
              ||||||||||||||||||
Sbjct: 115401 aaaaattatagttcaata 115384

>gb|AF411806.1| Lycopersicon esculentum BAC clone Clemson_Id 2O7, partial sequence
          Length = 61382

 Score = 36.2 bits (18), Expect = 3.3
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                   
Query: 4     ctaaaaattatagttcaatact 25
             ||||||||||| ||||||||||
Sbjct: 15012 ctaaaaattattgttcaatact 15033

>gb|AF411805.1| Lycopersicon esculentum BAC clone Clemson_Id 2O7, partial sequence
          Length = 30839

 Score = 36.2 bits (18), Expect = 3.3
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                  
Query: 4    ctaaaaattatagttcaatact 25
            ||||||||||| ||||||||||
Sbjct: 9932 ctaaaaattattgttcaatact 9911

>gb|AC174233.4| Pan troglodytes BAC clone CH251-560K10 from chromosome unknown, complete
              sequence
          Length = 179813

 Score = 36.2 bits (18), Expect = 3.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 5      taaaaattatagttcaat 22
              ||||||||||||||||||
Sbjct: 114862 taaaaattatagttcaat 114879

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 36.2 bits (18), Expect = 3.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                  
Query: 6        aaaaattatagttcaata 23
                ||||||||||||||||||
Sbjct: 25054473 aaaaattatagttcaata 25054456

>gb|AF311279.1|AF311279 Anopheles bellator NADH dehydrogenase subunit 5 (ND5) gene,
          partial cds; mitochondrial gene for mitochondrial
          product
          Length = 525

 Score = 36.2 bits (18), Expect = 3.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                            
Query: 3  tctaaaaattatagttca 20
          ||||||||||||||||||
Sbjct: 72 tctaaaaattatagttca 55

>gb|AF311278.1|AF311278 Anopheles cruzii NADH dehydrogenase subunit 5 (ND5) gene, partial
          cds; mitochondrial gene for mitochondrial product
          Length = 525

 Score = 36.2 bits (18), Expect = 3.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                            
Query: 3  tctaaaaattatagttca 20
          ||||||||||||||||||
Sbjct: 72 tctaaaaattatagttca 55

>gb|AC006327.3| Homo sapiens BAC clone RP11-59I21 from 2, complete sequence
          Length = 92705

 Score = 36.2 bits (18), Expect = 3.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 5     taaaaattatagttcaat 22
             ||||||||||||||||||
Sbjct: 63750 taaaaattatagttcaat 63733

>gb|AF296835.1|T8M17 Arabidopsis thaliana BAC T8M17
          Length = 114695

 Score = 36.2 bits (18), Expect = 3.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 5     taaaaattatagttcaat 22
             ||||||||||||||||||
Sbjct: 68048 taaaaattatagttcaat 68031

>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome
          Length = 6413771

 Score = 36.2 bits (18), Expect = 3.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 18      tcaatactcccatcatac 35
               ||||||||||||||||||
Sbjct: 6267774 tcaatactcccatcatac 6267757

>emb|AL713904.3|CNS07YQ4 Oryza sativa chromosome 12, . BAC OJ1306_H03 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 121563

 Score = 36.2 bits (18), Expect = 3.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 6     aaaaattatagttcaata 23
             ||||||||||||||||||
Sbjct: 77006 aaaaattatagttcaata 77023

>emb|AL773561.7| Mouse DNA sequence from clone RP23-71D9 on chromosome X, complete
             sequence
          Length = 174072

 Score = 36.2 bits (18), Expect = 3.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 18    tcaatactcccatcatac 35
             ||||||||||||||||||
Sbjct: 33830 tcaatactcccatcatac 33813

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 36.2 bits (18), Expect = 3.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                  
Query: 6        aaaaattatagttcaata 23
                ||||||||||||||||||
Sbjct: 24982678 aaaaattatagttcaata 24982661

>emb|AL928754.2|CNS08CBR Oryza sativa chromosome 12, . BAC OSJNBa0056D07 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 146686

 Score = 36.2 bits (18), Expect = 3.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 6     aaaaattatagttcaata 23
             ||||||||||||||||||
Sbjct: 52695 aaaaattatagttcaata 52712

>gb|U46753.1| Caenorhabditis elegans cosmid C34F11, complete sequence
          Length = 45189

 Score = 36.2 bits (18), Expect = 3.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 7     aaaattatagttcaatac 24
             ||||||||||||||||||
Sbjct: 36849 aaaattatagttcaatac 36866


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 364,875
Number of Sequences: 3902068
Number of extensions: 364875
Number of successful extensions: 88203
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 88042
Number of HSP's gapped (non-prelim): 161
length of query: 35
length of database: 17,233,045,268
effective HSP length: 20
effective length of query: 15
effective length of database: 17,155,003,908
effective search space: 257325058620
effective search space used: 257325058620
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)