ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl22c01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1BTKL_DROME (P08630) Tyrosine-protein kinase Btk29A (EC 2.7.10.2)... 29 2.4
2UBP3_SCHPO (O94269) Probable ubiquitin carboxyl-terminal hydrola... 28 4.2
3HEPH_MOUSE (Q9Z0Z4) Hephaestin precursor (EC 1.-.-.-) 28 7.1
4TSP50_HUMAN (Q9UI38) Testis-specific protease-like protein 50 pr... 28 7.1
5OR4D2_HUMAN (P58180) Olfactory receptor 4D2 (Olfactory receptor ... 27 9.3

>BTKL_DROME (P08630) Tyrosine-protein kinase Btk29A (EC 2.7.10.2) (Dsrc28C)|
          Length = 786

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +1

Query: 214 VLEMPKN*QSEVHDISCLPWQYCPSHQPKIR 306
           +LE PK+   E++D+  L W + P  +P  R
Sbjct: 741 ILEKPKSCAKEIYDVMKLCWSHGPEERPAFR 771



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>UBP3_SCHPO (O94269) Probable ubiquitin carboxyl-terminal hydrolase 3 (EC|
           3.1.2.15) (Ubiquitin thioesterase 3) (Ubiquitin-specific
           processing protease 3) (Deubiquitinating enzyme 3)
          Length = 512

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +1

Query: 259 SCLPWQYCPSHQPKIRWHNRTKTPTNVDLLSSVQ 360
           S LPW  C  H+   R   + ++P N+D   SVQ
Sbjct: 26  SLLPWYSCSEHEFPHRKARKRRSPKNLDWSVSVQ 59



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>HEPH_MOUSE (Q9Z0Z4) Hephaestin precursor (EC 1.-.-.-)|
          Length = 1157

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +1

Query: 265 LPWQYCPSHQPKIRWHNRTK 324
           + W YCP    ++ WHN ++
Sbjct: 741 IEWDYCPDRSWELEWHNTSE 760



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>TSP50_HUMAN (Q9UI38) Testis-specific protease-like protein 50 precursor|
          Length = 385

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +1

Query: 256 ISCLPWQYCPSHQPKIRWHNRTKTPTNVDLLSS 354
           + C+P   CPS +P++ W    +TPT   L S+
Sbjct: 57  VQCVPKATCPSSRPRLLW----QTPTTQTLPST 85



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>OR4D2_HUMAN (P58180) Olfactory receptor 4D2 (Olfactory receptor OR17-24)|
           (B-lymphocyte membrane protein BC2009)
          Length = 307

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -2

Query: 257 MSWTSDC*FLGISNTRSLSR 198
           ++W SD  FLG+S TR L R
Sbjct: 6   LTWVSDFVFLGLSQTRELQR 25


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,215,386
Number of Sequences: 219361
Number of extensions: 1011665
Number of successful extensions: 2139
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2089
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2139
length of database: 80,573,946
effective HSP length: 98
effective length of database: 59,076,568
effective search space used: 1417837632
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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