>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  117 bits (59), Expect = 3e-23
 Identities = 108/122 (88%), Gaps = 3/122 (2%)
 Strand = Plus / Minus

                                                                            
Query: 221      aaatgcctaagaattaacagtcagaagtccacgacataagctgcttgccctggcagtatt 280
                ||||||||||||||||   ||||||| ||  |||||||||||||||||||||| ||  ||
Sbjct: 19143413 aaatgcctaagaattat--gtcagaattctgcgacataagctgcttgccctggtagagtt 19143356

                                                                            
Query: 281      gtccaagtcatcagccaaaaataagatggcataatagaac-taagacaccaacaaatgtt 339
                |||||||||||||||||||||||||||| |||| |||||| ||||  |||||||||||||
Sbjct: 19143355 gtccaagtcatcagccaaaaataagatgacatactagaacttaagtgaccaacaaatgtt 19143296

                  
Query: 340      ga 341
                ||
Sbjct: 19143295 ga 19143294

>dbj|AK063403.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-A05, full
            insert sequence
          Length = 2337

 Score =  117 bits (59), Expect = 3e-23
 Identities = 108/122 (88%), Gaps = 3/122 (2%)
 Strand = Plus / Minus

                                                                        
Query: 221  aaatgcctaagaattaacagtcagaagtccacgacataagctgcttgccctggcagtatt 280
            ||||||||||||||||   ||||||| ||  |||||||||||||||||||||| ||  ||
Sbjct: 1985 aaatgcctaagaattat--gtcagaattctgcgacataagctgcttgccctggtagagtt 1928

                                                                        
Query: 281  gtccaagtcatcagccaaaaataagatggcataatagaac-taagacaccaacaaatgtt 339
            |||||||||||||||||||||||||||| |||| |||||| ||||  |||||||||||||
Sbjct: 1927 gtccaagtcatcagccaaaaataagatgacatactagaacttaagtgaccaacaaatgtt 1868

              
Query: 340  ga 341
            ||
Sbjct: 1867 ga 1866

>emb|AL731599.2|OSJN00244 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0053B21,
             complete sequence
          Length = 151936

 Score =  117 bits (59), Expect = 3e-23
 Identities = 108/122 (88%), Gaps = 3/122 (2%)
 Strand = Plus / Minus

                                                                         
Query: 221   aaatgcctaagaattaacagtcagaagtccacgacataagctgcttgccctggcagtatt 280
             ||||||||||||||||   ||||||| ||  |||||||||||||||||||||| ||  ||
Sbjct: 76933 aaatgcctaagaattat--gtcagaattctgcgacataagctgcttgccctggtagagtt 76876

                                                                         
Query: 281   gtccaagtcatcagccaaaaataagatggcataatagaac-taagacaccaacaaatgtt 339
             |||||||||||||||||||||||||||| |||| |||||| ||||  |||||||||||||
Sbjct: 76875 gtccaagtcatcagccaaaaataagatgacatactagaacttaagtgaccaacaaatgtt 76816

               
Query: 340   ga 341
             ||
Sbjct: 76815 ga 76814

>gb|AY110082.1| Zea mays CL50599_1 mRNA sequence
          Length = 821

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 47/51 (92%)
 Strand = Plus / Plus

                                                              
Query: 260 gctgcttgccctggcagtattgtccaagtcatcagccaaaaataagatggc 310
           |||||||||||||| ||| ||||||||| |||||||| |||||||||||||
Sbjct: 443 gctgcttgccctggaagtgttgtccaagccatcagccgaaaataagatggc 493



 Score = 46.1 bits (23), Expect = 0.080
 Identities = 35/38 (92%), Gaps = 2/38 (5%)
 Strand = Plus / Plus

                                                 
Query: 215 tgttagaaatgcctaagaattaaca--gtcagaagtcc 250
           |||||| ||||||||||||||||||  |||||||||||
Sbjct: 388 tgttaggaatgcctaagaattaacaaggtcagaagtcc 425

>emb|BX927378.12| Zebrafish DNA sequence from clone CH211-116K3 in linkage group 5,
              complete sequence
          Length = 123661

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 45     tcccccctcaaacttgatggtt 66
              ||||||||||||||||||||||
Sbjct: 102925 tcccccctcaaacttgatggtt 102904

>ref|NM_111250.2| Arabidopsis thaliana binding AT3G03790 transcript variant
           AT3G03790.1 mRNA, complete cds
          Length = 4023

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 166 tgcttcttttactctagaaga 186
           |||||||||||||||||||||
Sbjct: 851 tgcttcttttactctagaaga 871

>ref|NM_202484.1| Arabidopsis thaliana binding AT3G03790 transcript variant
           AT3G03790.2 mRNA, complete cds
          Length = 4032

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 166 tgcttcttttactctagaaga 186
           |||||||||||||||||||||
Sbjct: 851 tgcttcttttactctagaaga 871

>gb|AC009540.6|ATAC009540 Arabidopsis thaliana chromosome III BAC F20H23 genomic sequence,
             complete sequence
          Length = 101410

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 166   tgcttcttttactctagaaga 186
             |||||||||||||||||||||
Sbjct: 53272 tgcttcttttactctagaaga 53252

>dbj|AK117198.1| Arabidopsis thaliana At3g03790 mRNA for unknown protein, complete
           cds, clone: RAFL16-74-J10
          Length = 4024

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 166 tgcttcttttactctagaaga 186
           |||||||||||||||||||||
Sbjct: 851 tgcttcttttactctagaaga 871

>ref|NM_138421.1| Homo sapiens serum amyloid A-like 1 (SAAL1), mRNA
          Length = 1527

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 329 caacaaatgttgacttgctg 348
           ||||||||||||||||||||
Sbjct: 613 caacaaatgttgacttgctg 632

>gb|AC115026.16| Mus musculus chromosome 1, clone RP24-238A19, complete sequence
          Length = 191726

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 318    aactaagacaccaacaaatg 337
              ||||||||||||||||||||
Sbjct: 119412 aactaagacaccaacaaatg 119431

>ref|XM_521852.1| PREDICTED: Pan troglodytes similar to tryptophan hydroxylase 1;
            tryptophan 5-monooxygenase; tryptophan hydroxylase
            (tryptophan 5-monooxygenase) (LOC466453), mRNA
          Length = 3222

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 329  caacaaatgttgacttgctg 348
            ||||||||||||||||||||
Sbjct: 1037 caacaaatgttgacttgctg 1056

>ref|XM_581261.2| PREDICTED: Bos taurus hypothetical LOC505038 (LOC505038), mRNA
          Length = 1608

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 329 caacaaatgttgacttgctg 348
           ||||||||||||||||||||
Sbjct: 592 caacaaatgttgacttgctg 611

>ref|XM_871078.1| PREDICTED: Bos taurus hypothetical protein LOC618752 (LOC618752),
           mRNA
          Length = 546

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 329 caacaaatgttgacttgctg 348
           ||||||||||||||||||||
Sbjct: 344 caacaaatgttgacttgctg 363

>gb|AC163484.4| Mus musculus chromosome 1, clone RP23-432C4, complete sequence
          Length = 193216

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 318    aactaagacaccaacaaatg 337
              ||||||||||||||||||||
Sbjct: 124071 aactaagacaccaacaaatg 124052

>emb|AL513527.9| Human DNA sequence from clone RP11-530M23 on chromosome 6 Contains part
             of the LAMA2 gene for laminin, alpha 2 (merosin,
             congenital muscular dystrophy) (LAMM), complete sequence
          Length = 139123

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 223   atgcctaagaattaacagtcagaa 246
             |||||||||||||| |||||||||
Sbjct: 82540 atgcctaagaattatcagtcagaa 82517

>emb|CR624243.1| full-length cDNA clone CS0DA009YL04 of Neuroblastoma of Homo
           sapiens (human)
          Length = 1503

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 329 caacaaatgttgacttgctg 348
           ||||||||||||||||||||
Sbjct: 627 caacaaatgttgacttgctg 646

>emb|CR623466.1| full-length cDNA clone CS0DE006YJ05 of Placenta of Homo sapiens
           (human)
          Length = 1484

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 329 caacaaatgttgacttgctg 348
           ||||||||||||||||||||
Sbjct: 598 caacaaatgttgacttgctg 617

>dbj|AK123457.1| Homo sapiens cDNA FLJ41463 fis, clone BRSTN2017237
          Length = 1521

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 329 caacaaatgttgacttgctg 348
           ||||||||||||||||||||
Sbjct: 625 caacaaatgttgacttgctg 644

>emb|CR616217.1| full-length cDNA clone CS0DH004YC04 of T cells (Jurkat cell line)
           of Homo sapiens (human)
          Length = 1487

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 329 caacaaatgttgacttgctg 348
           ||||||||||||||||||||
Sbjct: 591 caacaaatgttgacttgctg 610

>emb|CR597687.1| full-length cDNA clone CS0DJ006YI14 of T cells (Jurkat cell line)
           Cot 10-normalized of Homo sapiens (human)
          Length = 1487

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 329 caacaaatgttgacttgctg 348
           ||||||||||||||||||||
Sbjct: 627 caacaaatgttgacttgctg 646

>emb|CR590267.1| full-length cDNA clone CS0DJ011YI17 of T cells (Jurkat cell line)
           Cot 10-normalized of Homo sapiens (human)
          Length = 1451

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 329 caacaaatgttgacttgctg 348
           ||||||||||||||||||||
Sbjct: 579 caacaaatgttgacttgctg 598

>gb|BC012010.1| Homo sapiens serum amyloid A-like 1, mRNA (cDNA clone MGC:21579
           IMAGE:4473003), complete cds
          Length = 1527

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 329 caacaaatgttgacttgctg 348
           ||||||||||||||||||||
Sbjct: 613 caacaaatgttgacttgctg 632


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,966,943
Number of Sequences: 3902068
Number of extensions: 2966943
Number of successful extensions: 50119
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 50053
Number of HSP's gapped (non-prelim): 60
length of query: 369
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 347
effective length of database: 17,147,199,772
effective search space: 5950078320884
effective search space used: 5950078320884
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)