ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl22b12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, ... 335 6e-89
2gb|BT009097.1| Triticum aestivum clone wkm2c.pk005.n2:fis, full ... 167 3e-38
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 96 1e-16
4emb|X64396.1|OSLRNA O.sativa mRNA for lipoxygenase L-2 96 1e-16
5gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genom... 96 1e-16
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 96 1e-16
7dbj|AK073529.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 1e-16
8ref|XM_469655.1| Oryza sativa (japonica cultivar-group), mRNA 90 6e-15
9gb|BT008992.1| Triticum aestivum clone wdk2c.pk011.j13:fis, full... 80 6e-12
10gb|DQ428248.1| Sorghum propinquum locus PRC0271 genomic sequence 80 6e-12
11gb|DQ428247.1| Sorghum bicolor voucher PI585454 locus PRC0271 ge... 80 6e-12
12gb|DQ428246.1| Sorghum bicolor voucher PI267539 locus PRC0271 ge... 80 6e-12
13gb|DQ428245.1| Sorghum bicolor voucher PI267408 locus PRC0271 ge... 80 6e-12
14gb|DQ428244.1| Sorghum bicolor voucher PI221607 locus PRC0271 ge... 80 6e-12
15gb|DQ428243.1| Sorghum bicolor voucher PI152702 locus PRC0271 ge... 80 6e-12
16gb|DQ428242.1| Sorghum bicolor voucher NSL92371 locus PRC0271 ge... 80 6e-12
17gb|DQ428241.1| Sorghum bicolor voucher NSL87902 locus PRC0271 ge... 80 6e-12
18gb|DQ428240.1| Sorghum bicolor voucher NSL87666 locus PRC0271 ge... 80 6e-12
19gb|DQ428239.1| Sorghum bicolor voucher NSL77217 locus PRC0271 ge... 80 6e-12
20gb|DQ428238.1| Sorghum bicolor voucher NSL77034 locus PRC0271 ge... 80 6e-12
21gb|DQ428237.1| Sorghum bicolor voucher NSL55243 locus PRC0271 ge... 80 6e-12
22gb|DQ428236.1| Sorghum bicolor voucher NSL51365 locus PRC0271 ge... 80 6e-12
23gb|DQ428235.1| Sorghum bicolor voucher NSL51030 locus PRC0271 ge... 80 6e-12
24gb|DQ428234.1| Sorghum bicolor voucher BTx623 locus PRC0271 geno... 80 6e-12
25gb|AY220737.1| Hordeum vulgare lipoxygenase 1 protein (LOXA) mRN... 72 1e-09
26gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds 72 1e-09
27gb|AY720897.2| Triticum aestivum lipoxygenase gene, partial sequ... 68 2e-08
28gb|AF271894.1|AF271894 Zea mays lipoxygenase (LOX) mRNA, complet... 64 3e-07
29ref|XM_469409.1| Oryza sativa (japonica cultivar-group), mRNA 60 5e-06
30gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosom... 60 5e-06
31gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genom... 60 5e-06
32gb|AF149803.1|AF149803 Zea mays lipoxygenase mRNA, lipoxygenase-... 60 5e-06
33gb|AF465643.1| Zea mays B73 lipoxygenase gene, complete cds 52 0.001
34gb|AF329371.1|AF329371 Zea mays lipoxygenase mRNA, complete cds 52 0.001
35emb|Z82288.2|CEZK896 Caenorhabditis elegans Cosmid ZK896, comple... 42 1.3
36emb|BX294385.17| Zebrafish DNA sequence from clone CH211-197E8 i... 42 1.3
37emb|AL136096.7| Human DNA sequence from clone RP1-23D17 on chrom... 40 5.0
38dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 5.0 
>gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, complete cds
          Length = 2910

 Score =  335 bits (169), Expect = 6e-89
 Identities = 181/185 (97%)
 Strand = Plus / Minus

                                                                        
Query: 190  agctagctccggtgtaagcaagcaaggatagcacaaaagcatgaggtctcgacgacggac 249
            ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 2727 agctagctccggtgtaagcaagcaaggatagcacaaaggcatgaggtctccacgacggac 2668

                                                                        
Query: 250  gtgctcagatcaaatggatatgctgttcgggatgcccctggcggagagcccctcggcctg 309
            |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 2667 gtgctcagatcagatggatatgctgttcgggatgcccctggcggtgagcccctcggcctg 2608

                                                                        
Query: 310  tcccgtgtggtcggaggtgtttgggtagagcagcatgtatgggaacttggccggcccggt 369
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2607 tcccgtgtggtcggaggtgtttgggtagagcagcatgtatgggaacttggccggcccggt 2548

                 
Query: 370  gcggt 374
            |||||
Sbjct: 2547 gcggt 2543



 Score =  254 bits (128), Expect = 2e-64
 Identities = 144/149 (96%), Gaps = 4/149 (2%)
 Strand = Plus / Minus

                                                                        
Query: 25   ttcattattgggcaaaacaagggattttttctgcacacgacgatgcattgaccggtagcc 84
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2896 ttcattattgggcaaaacaagggattttttctgcacacgacgatgcattgaccggtagcc 2837

                                                                        
Query: 85   agctgagctgagcttccgcatgccgatcagacccgtcgtgcacgcaccc----tcattgc 140
            |||||||||||||||||||||||||||||||||||||||||||||||||    | |||||
Sbjct: 2836 agctgagctgagcttccgcatgccgatcagacccgtcgtgcacgcacccttatttattgc 2777

                                         
Query: 141  cttaattattcatgcaccggcacaactct 169
            |||||||||||||||||||||||||||||
Sbjct: 2776 cttaattattcatgcaccggcacaactct 2748
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>gb|BT009097.1| Triticum aestivum clone wkm2c.pk005.n2:fis, full insert mRNA
           sequence
          Length = 1129

 Score =  167 bits (84), Expect = 3e-38
 Identities = 105/112 (93%)
 Strand = Plus / Minus

                                                                       
Query: 263 atggatatgctgttcgggatgcccctggcggagagcccctcggcctgtcccgtgtggtcg 322
           ||||| |||||||| |||||||||||||| | ||||||||||||||| ||||||||||||
Sbjct: 902 atggagatgctgttggggatgcccctggccgtgagcccctcggcctggcccgtgtggtcg 843

                                                               
Query: 323 gaggtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggt 374
           |||||||| ||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 842 gaggtgttggggtagagcagcatgtaggggaacttggccggcccggtgcggt 791



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                              
Query: 18   catcgacttcattattgggcaaaacaagggattttttctgcacacgacga 67
            ||||||||| |||||||||||||  |||||| |||||||| |||||||||
Sbjct: 1099 catcgactttattattgggcaaatgaagggaatttttctgtacacgacga 1050



 Score = 48.1 bits (24), Expect = 0.020
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 100  ccgcatgccgatcagacccgtcgtgcac 127
            ||||||||||||| ||||||||||||||
Sbjct: 1045 ccgcatgccgatcggacccgtcgtgcac 1018
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 96/112 (85%)
 Strand = Plus / Minus

                                                                            
Query: 256      agatcaaatggatatgctgttcgggatgcccctggcggagagcccctcggcctgtcccgt 315
                |||||| ||||| |||||||| |||||||||||||||||||| ||  | || |  ||| |
Sbjct: 30026452 agatcagatggagatgctgttggggatgcccctggcggagaggccggcagcgtcgccctt 30026393

                                                                    
Query: 316      gtggtcggaggtgtttgggtagagcagcatgtatgggaacttggccggcccg 367
                | |||||||||||||||||||||||||| |||| ||||| |||| |||||||
Sbjct: 30026392 gaggtcggaggtgtttgggtagagcagcgtgtaggggaaattggtcggcccg 30026341



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                      
Query: 319      gtcggaggtgtttgggtagagcagcatgtatgggaact 356
                |||||||||||| ||||| |||||||||||||||||||
Sbjct: 27803047 gtcggaggtgttggggtaaagcagcatgtatgggaact 27803010
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>emb|X64396.1|OSLRNA O.sativa mRNA for lipoxygenase L-2
          Length = 2830

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 96/112 (85%)
 Strand = Plus / Minus

                                                                        
Query: 256  agatcaaatggatatgctgttcgggatgcccctggcggagagcccctcggcctgtcccgt 315
            |||||| ||||| |||||||| |||||||||||||||||||| ||  | || |  ||| |
Sbjct: 2698 agatcagatggagatgctgttggggatgcccctggcggagaggccggcagcgtcgccctt 2639

                                                                
Query: 316  gtggtcggaggtgtttgggtagagcagcatgtatgggaacttggccggcccg 367
            | |||||||||||||||||||||||||| |||| ||||| |||| |||||||
Sbjct: 2638 gaggtcggaggtgtttgggtagagcagcgtgtaggggaaattggtcggcccg 2587
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>gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genomic sequence, complete
             sequence
          Length = 155106

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 96/112 (85%)
 Strand = Plus / Plus

                                                                         
Query: 256   agatcaaatggatatgctgttcgggatgcccctggcggagagcccctcggcctgtcccgt 315
             |||||| ||||| |||||||| |||||||||||||||||||| ||  | || |  ||| |
Sbjct: 81299 agatcagatggagatgctgttggggatgcccctggcggagaggccggcagcgtcgccctt 81358

                                                                 
Query: 316   gtggtcggaggtgtttgggtagagcagcatgtatgggaacttggccggcccg 367
             | |||||||||||||||||||||||||| |||| ||||| |||| |||||||
Sbjct: 81359 gaggtcggaggtgtttgggtagagcagcgtgtaggggaaattggtcggcccg 81410
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 96/112 (85%)
 Strand = Plus / Minus

                                                                            
Query: 256      agatcaaatggatatgctgttcgggatgcccctggcggagagcccctcggcctgtcccgt 315
                |||||| ||||| |||||||| |||||||||||||||||||| ||  | || |  ||| |
Sbjct: 30117874 agatcagatggagatgctgttggggatgcccctggcggagaggccggcagcgtcgccctt 30117815

                                                                    
Query: 316      gtggtcggaggtgtttgggtagagcagcatgtatgggaacttggccggcccg 367
                | |||||||||||||||||||||||||| |||| ||||| |||| |||||||
Sbjct: 30117814 gaggtcggaggtgtttgggtagagcagcgtgtaggggaaattggtcggcccg 30117763



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                      
Query: 319      gtcggaggtgtttgggtagagcagcatgtatgggaact 356
                |||||||||||| ||||| |||||||||||||||||||
Sbjct: 27894371 gtcggaggtgttggggtaaagcagcatgtatgggaact 27894334
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>dbj|AK073529.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046E17, full
            insert sequence
          Length = 2928

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 96/112 (85%)
 Strand = Plus / Minus

                                                                        
Query: 256  agatcaaatggatatgctgttcgggatgcccctggcggagagcccctcggcctgtcccgt 315
            |||||| ||||| |||||||| |||||||||||||||||||| ||  | || |  ||| |
Sbjct: 2731 agatcagatggagatgctgttggggatgcccctggcggagaggccggcagcgtcgccctt 2672

                                                                
Query: 316  gtggtcggaggtgtttgggtagagcagcatgtatgggaacttggccggcccg 367
            | |||||||||||||||||||||||||| |||| ||||| |||| |||||||
Sbjct: 2671 gaggtcggaggtgtttgggtagagcagcgtgtaggggaaattggtcggcccg 2620
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>ref|XM_469655.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2613

 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 90/105 (85%)
 Strand = Plus / Minus

                                                                        
Query: 263  atggatatgctgttcgggatgcccctggcggagagcccctcggcctgtcccgtgtggtcg 322
            ||||| |||||||| |||||||||||||||||||| ||  | || |  ||| || |||||
Sbjct: 2609 atggagatgctgttggggatgcccctggcggagaggccggcagcgtcgcccttgaggtcg 2550

                                                         
Query: 323  gaggtgtttgggtagagcagcatgtatgggaacttggccggcccg 367
            ||||||||||||||||||||| |||| ||||| |||| |||||||
Sbjct: 2549 gaggtgtttgggtagagcagcgtgtaggggaaattggtcggcccg 2505
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>gb|BT008992.1| Triticum aestivum clone wdk2c.pk011.j13:fis, full insert mRNA
           sequence
          Length = 1020

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 94/112 (83%)
 Strand = Plus / Minus

                                                                       
Query: 263 atggatatgctgttcgggatgcccctggcggagagcccctcggcctgtcccgtgtggtcg 322
           ||||| |||||||| ||||||||| | |||| ||||||  ||||    ||| |||| |||
Sbjct: 749 atggagatgctgttggggatgcccttagcggtgagcccggcggcggcgcccttgtgatcg 690

                                                               
Query: 323 gaggtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggt 374
           |||||||| |||||||||| |||||| |||||||||||||| ||| ||||||
Sbjct: 689 gaggtgttggggtagagcaacatgtaggggaacttggccggaccgttgcggt 638
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>gb|DQ428248.1| Sorghum propinquum locus PRC0271 genomic sequence
          Length = 810

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 52/56 (92%)
 Strand = Plus / Minus

                                                                   
Query: 319 gtcggaggtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggt 374
           |||||||||||| |||||||||||| |||| |||||||||||||||||| ||||||
Sbjct: 736 gtcggaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggt 681
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>gb|DQ428247.1| Sorghum bicolor voucher PI585454 locus PRC0271 genomic sequence
          Length = 805

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 52/56 (92%)
 Strand = Plus / Minus

                                                                   
Query: 319 gtcggaggtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggt 374
           |||||||||||| |||||||||||| |||| |||||||||||||||||| ||||||
Sbjct: 731 gtcggaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggt 676
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>gb|DQ428246.1| Sorghum bicolor voucher PI267539 locus PRC0271 genomic sequence
          Length = 805

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 52/56 (92%)
 Strand = Plus / Minus

                                                                   
Query: 319 gtcggaggtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggt 374
           |||||||||||| |||||||||||| |||| |||||||||||||||||| ||||||
Sbjct: 731 gtcggaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggt 676
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>gb|DQ428245.1| Sorghum bicolor voucher PI267408 locus PRC0271 genomic sequence
          Length = 805

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 52/56 (92%)
 Strand = Plus / Minus

                                                                   
Query: 319 gtcggaggtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggt 374
           |||||||||||| |||||||||||| |||| |||||||||||||||||| ||||||
Sbjct: 731 gtcggaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggt 676
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>gb|DQ428244.1| Sorghum bicolor voucher PI221607 locus PRC0271 genomic sequence
          Length = 805

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 52/56 (92%)
 Strand = Plus / Minus

                                                                   
Query: 319 gtcggaggtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggt 374
           |||||||||||| |||||||||||| |||| |||||||||||||||||| ||||||
Sbjct: 731 gtcggaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggt 676
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>gb|DQ428243.1| Sorghum bicolor voucher PI152702 locus PRC0271 genomic sequence
          Length = 805

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 52/56 (92%)
 Strand = Plus / Minus

                                                                   
Query: 319 gtcggaggtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggt 374
           |||||||||||| |||||||||||| |||| |||||||||||||||||| ||||||
Sbjct: 731 gtcggaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggt 676
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>gb|DQ428242.1| Sorghum bicolor voucher NSL92371 locus PRC0271 genomic sequence
          Length = 805

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 52/56 (92%)
 Strand = Plus / Minus

                                                                   
Query: 319 gtcggaggtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggt 374
           |||||||||||| |||||||||||| |||| |||||||||||||||||| ||||||
Sbjct: 731 gtcggaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggt 676
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>gb|DQ428241.1| Sorghum bicolor voucher NSL87902 locus PRC0271 genomic sequence
          Length = 805

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 52/56 (92%)
 Strand = Plus / Minus

                                                                   
Query: 319 gtcggaggtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggt 374
           |||||||||||| |||||||||||| |||| |||||||||||||||||| ||||||
Sbjct: 731 gtcggaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggt 676
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>gb|DQ428240.1| Sorghum bicolor voucher NSL87666 locus PRC0271 genomic sequence
          Length = 805

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 52/56 (92%)
 Strand = Plus / Minus

                                                                   
Query: 319 gtcggaggtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggt 374
           |||||||||||| |||||||||||| |||| |||||||||||||||||| ||||||
Sbjct: 731 gtcggaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggt 676
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>gb|DQ428239.1| Sorghum bicolor voucher NSL77217 locus PRC0271 genomic sequence
          Length = 805

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 52/56 (92%)
 Strand = Plus / Minus

                                                                   
Query: 319 gtcggaggtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggt 374
           |||||||||||| |||||||||||| |||| |||||||||||||||||| ||||||
Sbjct: 731 gtcggaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggt 676
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>gb|DQ428238.1| Sorghum bicolor voucher NSL77034 locus PRC0271 genomic sequence
          Length = 805

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 52/56 (92%)
 Strand = Plus / Minus

                                                                   
Query: 319 gtcggaggtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggt 374
           |||||||||||| |||||||||||| |||| |||||||||||||||||| ||||||
Sbjct: 731 gtcggaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggt 676
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>gb|DQ428237.1| Sorghum bicolor voucher NSL55243 locus PRC0271 genomic sequence
          Length = 805

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 52/56 (92%)
 Strand = Plus / Minus

                                                                   
Query: 319 gtcggaggtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggt 374
           |||||||||||| |||||||||||| |||| |||||||||||||||||| ||||||
Sbjct: 731 gtcggaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggt 676
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>gb|DQ428236.1| Sorghum bicolor voucher NSL51365 locus PRC0271 genomic sequence
          Length = 805

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 52/56 (92%)
 Strand = Plus / Minus

                                                                   
Query: 319 gtcggaggtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggt 374
           |||||||||||| |||||||||||| |||| |||||||||||||||||| ||||||
Sbjct: 731 gtcggaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggt 676
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>gb|DQ428235.1| Sorghum bicolor voucher NSL51030 locus PRC0271 genomic sequence
          Length = 805

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 52/56 (92%)
 Strand = Plus / Minus

                                                                   
Query: 319 gtcggaggtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggt 374
           |||||||||||| |||||||||||| |||| |||||||||||||||||| ||||||
Sbjct: 731 gtcggaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggt 676
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>gb|DQ428234.1| Sorghum bicolor voucher BTx623 locus PRC0271 genomic sequence
          Length = 805

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 52/56 (92%)
 Strand = Plus / Minus

                                                                   
Query: 319 gtcggaggtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggt 374
           |||||||||||| |||||||||||| |||| |||||||||||||||||| ||||||
Sbjct: 731 gtcggaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggt 676
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>gb|AY220737.1| Hordeum vulgare lipoxygenase 1 protein (LOXA) mRNA, partial cds
          Length = 1331

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 54/60 (90%)
 Strand = Plus / Minus

                                                                        
Query: 315  tgtggtcggaggtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggt 374
            |||||||||||||||| ||||||||||||||||| || ||||| ||||| ||| ||||||
Sbjct: 1030 tgtggtcggaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggt 971
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>gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds
          Length = 2818

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 54/60 (90%)
 Strand = Plus / Minus

                                                                        
Query: 315  tgtggtcggaggtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggt 374
            |||||||||||||||| ||||||||||||||||| || ||||| ||||| ||| ||||||
Sbjct: 2601 tgtggtcggaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggt 2542
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>gb|AY720897.2| Triticum aestivum lipoxygenase gene, partial sequence
          Length = 934

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 88/106 (83%)
 Strand = Plus / Plus

                                                                       
Query: 269 atgctgttcgggatgcccctggcggagagcccctcggcctgtcccgtgtggtcggaggtg 328
           |||||||| ||||||||| |||||| ||| ||  ||||    ||| |||||||  |||||
Sbjct: 1   atgctgttggggatgcccttggcggtgaggccggcggcggcacccttgtggtcttaggtg 60

                                                         
Query: 329 tttgggtagagcagcatgtatgggaacttggccggcccggtgcggt 374
           || ||||||||||||||||| |||| ||||||||| ||| ||||||
Sbjct: 61  ttagggtagagcagcatgtaggggagcttggccgggccgttgcggt 106
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>gb|AF271894.1|AF271894 Zea mays lipoxygenase (LOX) mRNA, complete cds
          Length = 2845

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                    
Query: 319  gtcggaggtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggt 374
            |||||||||||| |||||||||||| |||| ||||||| |||||| ||| ||||||
Sbjct: 2562 gtcggaggtgttggggtagagcagcgtgtaggggaactcggccgggccgttgcggt 2507
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>ref|XM_469409.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2601

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                  
Query: 319  gtcggaggtgtttgggtagagcagcatgtatgggaact 356
            |||||||||||| ||||| |||||||||||||||||||
Sbjct: 2541 gtcggaggtgttggggtaaagcagcatgtatgggaact 2504
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>gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0024B16
             map S2606, complete sequence
          Length = 124140

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                   
Query: 319   gtcggaggtgtttgggtagagcagcatgtatgggaact 356
             |||||||||||| ||||| |||||||||||||||||||
Sbjct: 47177 gtcggaggtgttggggtaaagcagcatgtatgggaact 47140
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>gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genomic sequence, complete
             sequence
          Length = 119329

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                   
Query: 319   gtcggaggtgtttgggtagagcagcatgtatgggaact 356
             |||||||||||| ||||| |||||||||||||||||||
Sbjct: 10846 gtcggaggtgttggggtaaagcagcatgtatgggaact 10883
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>gb|AF149803.1|AF149803 Zea mays lipoxygenase mRNA, lipoxygenase-L2 allele, partial cds
          Length = 2267

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                      
Query: 315  tgtggtcggaggtgtttgggtagagcagcatgtatgggaact 356
            ||||||| |||||||| ||||||||||||||||| |||||||
Sbjct: 2008 tgtggtcagaggtgttggggtagagcagcatgtaggggaact 1967
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>gb|AF465643.1| Zea mays B73 lipoxygenase gene, complete cds
          Length = 5013

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                      
Query: 315  tgtggtcggaggtgtttgggtagagcagcatgtatgggaact 356
            ||||||| |||||||| || |||||||||||||| |||||||
Sbjct: 4606 tgtggtcagaggtgttgggatagagcagcatgtaggggaact 4565
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>gb|AF329371.1|AF329371 Zea mays lipoxygenase mRNA, complete cds
          Length = 2595

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                      
Query: 315  tgtggtcggaggtgtttgggtagagcagcatgtatgggaact 356
            ||||||| |||||||| || |||||||||||||| |||||||
Sbjct: 2539 tgtggtcagaggtgttgggatagagcagcatgtaggggaact 2498
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>emb|Z82288.2|CEZK896 Caenorhabditis elegans Cosmid ZK896, complete sequence
          Length = 37711

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 39    aaacaagggattttttctgca 59
             |||||||||||||||||||||
Sbjct: 32565 aaacaagggattttttctgca 32585
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>emb|BX294385.17| Zebrafish DNA sequence from clone CH211-197E8 in linkage group 24,
             complete sequence
          Length = 155584

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 36    gcaaaacaagggattttttct 56
             |||||||||||||||||||||
Sbjct: 39634 gcaaaacaagggattttttct 39614
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>emb|AL136096.7| Human DNA sequence from clone RP1-23D17 on chromosome 6q15-16.2 Contains
              the SPACA1 gene for sperm acrosome associated 1, part of
              the CNR1 gene for cannabinoid receptor 1 (brain) and a CpG
              island, complete sequence
          Length = 112212

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 133    ctcattgccttaattattca 152
              ||||||||||||||||||||
Sbjct: 107139 ctcattgccttaattattca 107158
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 291     cggagagcccctcggcctgtcccg 314
               ||||||| ||||||||||||||||
Sbjct: 1920668 cggagagtccctcggcctgtcccg 1920691


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,303,257
Number of Sequences: 3902068
Number of extensions: 2303257
Number of successful extensions: 41365
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 41232
Number of HSP's gapped (non-prelim): 132
length of query: 374
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 352
effective length of database: 17,147,199,772
effective search space: 6035814319744
effective search space used: 6035814319744
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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