>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 50/55 (90%)
 Strand = Plus / Minus

                                                                      
Query: 225     ccctaccggaatcaatggcacggcccacagacagctagaacaaccaagaacaccg 279
               ||||||||| ||||||||||||| ||||| ||||| || ||||||||||||||||
Sbjct: 7741627 ccctaccggcatcaatggcacggtccacatacagcaaggacaaccaagaacaccg 7741573



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 130      agcaacatactactagtacta 150
                |||||||||||||||||||||
Sbjct: 35686192 agcaacatactactagtacta 35686212



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 132      caacatactactagtactaa 151
                ||||||||||||||||||||
Sbjct: 40019904 caacatactactagtactaa 40019923

>dbj|AP003210.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0010K01
          Length = 144404

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 50/55 (90%)
 Strand = Plus / Minus

                                                                    
Query: 225   ccctaccggaatcaatggcacggcccacagacagctagaacaaccaagaacaccg 279
             ||||||||| ||||||||||||| ||||| ||||| || ||||||||||||||||
Sbjct: 44208 ccctaccggcatcaatggcacggtccacatacagcaaggacaaccaagaacaccg 44154

>dbj|AK122130.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133B05, full
            insert sequence
          Length = 3604

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 50/55 (90%)
 Strand = Plus / Minus

                                                                   
Query: 225  ccctaccggaatcaatggcacggcccacagacagctagaacaaccaagaacaccg 279
            ||||||||| ||||||||||||| ||||| ||||| || ||||||||||||||||
Sbjct: 3475 ccctaccggcatcaatggcacggtccacatacagcaaggacaaccaagaacaccg 3421

>dbj|AK070058.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041N23, full
            insert sequence
          Length = 1619

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 50/55 (90%)
 Strand = Plus / Minus

                                                                   
Query: 225  ccctaccggaatcaatggcacggcccacagacagctagaacaaccaagaacaccg 279
            ||||||||| ||||||||||||| ||||| ||||| || ||||||||||||||||
Sbjct: 1374 ccctaccggcatcaatggcacggtccacatacagcaaggacaaccaagaacaccg 1320

>dbj|AK067723.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116J03, full
            insert sequence
          Length = 3671

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 50/55 (90%)
 Strand = Plus / Minus

                                                                   
Query: 225  ccctaccggaatcaatggcacggcccacagacagctagaacaaccaagaacaccg 279
            ||||||||| ||||||||||||| ||||| ||||| || ||||||||||||||||
Sbjct: 3420 ccctaccggcatcaatggcacggtccacatacagcaaggacaaccaagaacaccg 3366

>dbj|AP004366.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0460C04
          Length = 189043

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 130   agcaacatactactagtacta 150
             |||||||||||||||||||||
Sbjct: 89529 agcaacatactactagtacta 89549

>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome
          Length = 2593857

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 268     ccaagaacaccgccgctagct 288
               |||||||||||||||||||||
Sbjct: 1229861 ccaagaacaccgccgctagct 1229881

>gb|AC154746.2| Mus musculus BAC clone RP24-396N7 from chromosome 14, complete sequence
          Length = 184783

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 65    aacaaccacccatatatggt 84
             ||||||||||||||||||||
Sbjct: 26055 aacaaccacccatatatggt 26074

>gb|AC105075.6| Mus musculus chromosome 1, clone RP23-366P11, complete sequence
          Length = 195511

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 249    ccacagacagctagaacaac 268
              ||||||||||||||||||||
Sbjct: 148060 ccacagacagctagaacaac 148079

>ref|XM_721270.1| Plasmodium yoelii yoelii str. 17XNL translation initiation factor
            IF-2 (PY05837) partial mRNA
          Length = 2817

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 23   aaaacaaagtaaaatggctg 42
            ||||||||||||||||||||
Sbjct: 2406 aaaacaaagtaaaatggctg 2425

>ref|XM_738326.1| Plasmodium chabaudi chabaudi translation initiation factor IF-2
            (PC000805.02.0) partial mRNA
          Length = 1797

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 23   aaaacaaagtaaaatggctg 42
            ||||||||||||||||||||
Sbjct: 1386 aaaacaaagtaaaatggctg 1405

>emb|CR788255.6| Zebrafish DNA sequence from clone DKEY-9C18 in linkage group 2, complete
              sequence
          Length = 210464

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 257    agctagaacaaccaagaaca 276
              ||||||||||||||||||||
Sbjct: 153678 agctagaacaaccaagaaca 153659

>dbj|AP003451.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0413C03
          Length = 162161

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 132    caacatactactagtactaa 151
              ||||||||||||||||||||
Sbjct: 111355 caacatactactagtactaa 111374

>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 358     gtggcgctggaggcgtcggc 377
               ||||||||||||||||||||
Sbjct: 4460400 gtggcgctggaggcgtcggc 4460419


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,462,612
Number of Sequences: 3902068
Number of extensions: 3462612
Number of successful extensions: 65721
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65578
Number of HSP's gapped (non-prelim): 143
length of query: 410
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 388
effective length of database: 17,147,199,772
effective search space: 6653113511536
effective search space used: 6653113511536
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)