>gb|AC145952.3| Pan troglodytes BAC clone RP43-18D16 from 7, complete sequence
          Length = 160354

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 75     gttactgcaggcaaggggcct 95
              |||||||||||||||||||||
Sbjct: 101362 gttactgcaggcaaggggcct 101342

>gb|AC083867.7| Homo sapiens chromosome 7 clone RP11-183I20, complete sequence
          Length = 148251

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 75     gttactgcaggcaaggggcct 95
              |||||||||||||||||||||
Sbjct: 115224 gttactgcaggcaaggggcct 115204

>emb|BX248117.9| Zebrafish DNA sequence from clone CH211-226D5, complete sequence
          Length = 181542

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 22    aacatcacatacagttgaaat 42
             |||||||||||||||||||||
Sbjct: 43893 aacatcacatacagttgaaat 43873

>emb|AL935294.6| Zebrafish DNA sequence from clone CH211-239I4, complete sequence
          Length = 168302

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 22     aacatcacatacagttgaaat 42
              |||||||||||||||||||||
Sbjct: 160390 aacatcacatacagttgaaat 160410

>ref|XM_417312.1| PREDICTED: Gallus gallus similar to retinoblastoma-like protein 1
           isoform a; cellular protein 107; 107 kDa
           retinoblastoma-associated protein (LOC419126), mRNA
          Length = 4771

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 288 gtcagagcagggcgggctgc 307
           ||||||||||||||||||||
Sbjct: 120 gtcagagcagggcgggctgc 139

>gb|AC144712.2| Danio rerio clone CH211-4G3, complete sequence
          Length = 197292

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 203   acagacagagattcagctgt 222
             ||||||||||||||||||||
Sbjct: 57478 acagacagagattcagctgt 57497

>emb|CR788310.10| Zebrafish DNA sequence from clone DKEY-74F15 in linkage group 2,
            complete sequence
          Length = 244700

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 165  agctctttttcttccccccaacaa 188
            ||||||||||||||||| ||||||
Sbjct: 1536 agctctttttcttccccgcaacaa 1513

>gb|AC122192.4| Mus musculus BAC clone RP23-45B2 from 14, complete sequence
          Length = 178698

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 183   caacaaagtatctacatggcacagacag 210
             ||||||||||||||||  ||||||||||
Sbjct: 85990 caacaaagtatctacagtgcacagacag 86017

>gb|AC073196.3| Homo sapiens BAC clone RP11-223A2 from 4, complete sequence
          Length = 68925

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 277   atgaaattccagtcagagca 296
             ||||||||||||||||||||
Sbjct: 54595 atgaaattccagtcagagca 54576

>emb|BX322554.3| Zebrafish DNA sequence from clone RP71-68G1 in linkage group 9, complete
              sequence
          Length = 138869

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 203    acagacagagattcagctgt 222
              ||||||||||||||||||||
Sbjct: 129525 acagacagagattcagctgt 129506

>emb|BX936337.9| Zebrafish DNA sequence from clone DKEY-100N23 in linkage group 9,
             complete sequence
          Length = 64132

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 204   cagacagagattcagctgtg 223
             ||||||||||||||||||||
Sbjct: 27002 cagacagagattcagctgtg 27021


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,759,861
Number of Sequences: 3902068
Number of extensions: 2759861
Number of successful extensions: 55843
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 55823
Number of HSP's gapped (non-prelim): 20
length of query: 317
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 295
effective length of database: 17,147,199,772
effective search space: 5058423932740
effective search space used: 5058423932740
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)