ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl22b04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1EX7L_XANAC (Q8PJW7) Probable exodeoxyribonuclease VII large subu... 30 1.2
2KR510_HUMAN (Q6L8G5) Keratin-associated protein 5-10 (Keratin-as... 30 1.5
3KRA92_HUMAN (Q9BYQ4) Keratin-associated protein 9-2 (Keratin-ass... 30 2.0
4KRA52_HUMAN (Q701N4) Keratin-associated protein 5-2 (Keratin-ass... 30 2.0
5KRA99_HUMAN (Q9BYP9) Keratin-associated protein 9-9 (Keratin-ass... 29 2.6
6KRA94_HUMAN (Q9BYQ2) Keratin-associated protein 9-4 (Keratin-ass... 29 2.6
7CECR6_HUMAN (Q9BXQ6) Cat eye syndrome critical region protein 6 29 3.4
8MT4_MOUSE (P47945) Metallothionein-4 (MT-4) (Metallothionein-IV)... 29 3.4
9MT4_HUMAN (P47944) Metallothionein-4 (MT-4) (Metallothionein-IV)... 29 3.4
10HSP90_EIMTE (O44001) Heat shock protein 90 28 4.5
11KRA47_HUMAN (Q9BYR0) Keratin-associated protein 4-7 (Keratin-ass... 28 4.5
12KR415_HUMAN (Q9BYQ5) Keratin-associated protein 4-15 (Keratin-as... 28 5.8
13ZNFX1_HUMAN (Q9P2E3) NFX1-type zinc finger-containing protein 1 28 7.6
14V002_FOWPV (Q9ICF9) Hypothetical protein FPV002/FPV259 28 7.6
15MT4_CANFA (Q9TUI5) Metallothionein-4 (MT-4) (Metallothionein-IV)... 27 9.9
16CECR6_MOUSE (Q99MX7) Cat eye syndrome critical region protein 6 ... 27 9.9

>EX7L_XANAC (Q8PJW7) Probable exodeoxyribonuclease VII large subunit (EC|
           3.1.11.6) (Exonuclease VII large subunit)
          Length = 445

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 18/60 (30%), Positives = 28/60 (46%)
 Frame = +2

Query: 11  HILGLKWRRITRSATKL*THNPKQQTDRWAQIFILLHLQSTGGLKQQHEQRQVEGITDRL 190
           H+L     R+ R   +L +HNP++      Q    LH Q+    + QH+Q Q+  I   L
Sbjct: 331 HVLERLQARVQRGQAQLQSHNPQRHLAGLQQRLRALHPQAAMQRRLQHDQLQLRRIARSL 390



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>KR510_HUMAN (Q6L8G5) Keratin-associated protein 5-10 (Keratin-associated|
           protein 5.10) (Ultrahigh sulfur keratin-associated
           protein 5.10)
          Length = 202

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = -2

Query: 174 PSTCRCSCCCFRPPVLCRCSRIKICAHLSVCC 79
           P  C+ SCC    PV C+ S  K C   S CC
Sbjct: 165 PCCCQSSCCV---PVCCQSSCCKPCCCQSSCC 193



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>KRA92_HUMAN (Q9BYQ4) Keratin-associated protein 9-2 (Keratin-associated protein|
           9.2) (Ultrahigh sulfur keratin-associated protein 9.2)
          Length = 174

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 6/38 (15%)
 Frame = -2

Query: 174 PSTCRCSCC---CFRPPVLCRCSRIKIC---AHLSVCC 79
           P+ CR +CC   C++P  +  CS    C     +S CC
Sbjct: 11  PTCCRTTCCRTTCWKPTTVTTCSSTSCCQPACCVSSCC 48



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>KRA52_HUMAN (Q701N4) Keratin-associated protein 5-2 (Keratin-associated protein|
           5.2) (Ultrahigh sulfur keratin-associated protein 5.2)
           (Keratin-associated protein 5-8) (Keratin-associated
           protein 5.8)
          Length = 177

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = -2

Query: 174 PSTCRCSCCCFRPPVLCRCSRIKICAHLSVCC 79
           P  C+ SCC    PV C+ S  K C   S CC
Sbjct: 140 PCCCQSSCCV---PVCCQSSCCKPCCCQSNCC 168



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>KRA99_HUMAN (Q9BYP9) Keratin-associated protein 9-9 (Keratin-associated protein|
           9.9) (Ultrahigh sulfur keratin-associated protein 9.9)
          Length = 154

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 6/38 (15%)
 Frame = -2

Query: 174 PSTCRCSCC---CFRPPVLCRCSRIKIC---AHLSVCC 79
           P+ CR +CC   C++P  +  CS    C     +S CC
Sbjct: 11  PTCCRTTCCRTTCWKPTTVTTCSSTPCCQPSCCVSSCC 48



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>KRA94_HUMAN (Q9BYQ2) Keratin-associated protein 9-4 (Keratin-associated protein|
           9.4) (Ultrahigh sulfur keratin-associated protein 9.4)
          Length = 154

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 6/38 (15%)
 Frame = -2

Query: 174 PSTCRCSCC---CFRPPVLCRCSRIKIC---AHLSVCC 79
           P+ CR +CC   C++P  +  CS    C     +S CC
Sbjct: 11  PTCCRTTCCRTTCWKPTTVTTCSSTPCCQPSCCVSSCC 48



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>CECR6_HUMAN (Q9BXQ6) Cat eye syndrome critical region protein 6|
          Length = 578

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 16/43 (37%), Positives = 19/43 (44%)
 Frame = -2

Query: 171 STCRCSCCCFRPPVLCRCSRIKICAHLSVCCFGLWVYNFVALL 43
           S C C CCC  P    R  R + CA    C +G    + V LL
Sbjct: 167 SCCPCCCCCGCPDRPGRRGRRRGCAPSPRCRWGYQALSVVLLL 209



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>MT4_MOUSE (P47945) Metallothionein-4 (MT-4) (Metallothionein-IV) (MT-IV)|
          Length = 62

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -2

Query: 168 TCRCSCCCFRPPVLCRCSRIKIC 100
           TCR SCC   PP   +C+R  IC
Sbjct: 29  TCRKSCCPCCPPGCAKCARGCIC 51



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>MT4_HUMAN (P47944) Metallothionein-4 (MT-4) (Metallothionein-IV) (MT-IV)|
          Length = 62

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -2

Query: 168 TCRCSCCCFRPPVLCRCSRIKIC 100
           TCR SCC   PP   +C+R  IC
Sbjct: 29  TCRKSCCPCCPPGCAKCARGCIC 51



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>HSP90_EIMTE (O44001) Heat shock protein 90|
          Length = 713

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +3

Query: 72  IQSNRQTDGHKSLFCCTYKALEV*NSSMNNDKSKELQTD 188
           +Q  ++ D HK L CCT + LE+  S     K +EL+ +
Sbjct: 514 VQQLKEFDNHK-LRCCTKEGLEIDESEEEKKKFEELKAE 551



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>KRA47_HUMAN (Q9BYR0) Keratin-associated protein 4-7 (Keratin-associated protein|
           4.7) (Ultrahigh sulfur keratin-associated protein 4.7)
          Length = 210

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 4/36 (11%)
 Frame = -2

Query: 174 PSTCRCSCC---CFRPPV-LCRCSRIKICAHLSVCC 79
           P+ C  SCC   C RP   + RC R + C   SVCC
Sbjct: 107 PTCCHPSCCISSCCRPSCCVSRCCRPQCCQ--SVCC 140



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>KR415_HUMAN (Q9BYQ5) Keratin-associated protein 4-15 (Keratin-associated|
           protein 4.15) (Ultrahigh sulfur keratin-associated
           protein 4.15) (Fragment)
          Length = 193

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
 Frame = -2

Query: 174 PSTCRCSC----CCFRPPVLCRCSRIKICAHLSVCC 79
           P+ CR SC    CC     + RC R + C   SVCC
Sbjct: 90  PTCCRPSCSISSCCRPSCCVSRCCRSQCCQ--SVCC 123



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>ZNFX1_HUMAN (Q9P2E3) NFX1-type zinc finger-containing protein 1|
          Length = 1918

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -2

Query: 159  CSCCCFRPPVLCRCSRIKICAHLSVCCFGL 70
            CS  C RPP    C+++ +C H    C GL
Sbjct: 1527 CSEPCNRPPCYVPCTKLLVCGH---PCIGL 1553



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>V002_FOWPV (Q9ICF9) Hypothetical protein FPV002/FPV259|
          Length = 222

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = -2

Query: 183 SVIPSTCRCSCCCFRP-PVLCRCSRIKICAHLSVCCF 76
           SV P+TC+C  C   P  V C C    + +    CC+
Sbjct: 24  SVRPATCKCVHCLLYPFEVCCECMSETLDSLEHSCCY 60



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>MT4_CANFA (Q9TUI5) Metallothionein-4 (MT-4) (Metallothionein-IV) (MT-IV)|
          Length = 62

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -2

Query: 168 TCRCSCCCFRPPVLCRCSRIKIC 100
           TCR SCC   PP   +C++  IC
Sbjct: 29  TCRKSCCPCCPPGCAKCAQGCIC 51



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>CECR6_MOUSE (Q99MX7) Cat eye syndrome critical region protein 6 homolog|
          Length = 572

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
 Frame = -2

Query: 171 STCRCSCCCF-RPPVLCRCSRIKICAHLSVCCFGLWVYNFVALL 43
           S C C CCC  RP    R  R + C+    C +G    + V LL
Sbjct: 162 SCCSCCCCCCGRPTRSGRRGRRRGCSPSPGCRWGYQALSVVLLL 205


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,638,313
Number of Sequences: 219361
Number of extensions: 840557
Number of successful extensions: 2291
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2281
length of database: 80,573,946
effective HSP length: 80
effective length of database: 63,025,066
effective search space used: 1512601584
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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