ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl22b04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL606669.4|OSJN00106 Oryza sativa genomic DNA, chromosome 4,... 101 1e-18
2dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 101 1e-18
3dbj|AK101563.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 1e-18
4dbj|AK065819.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 1e-18
5dbj|AB101645.1| Oryza sativa (japonica cultivar-group) Roc2 mRNA... 101 1e-18
6gb|AY107087.1| Zea mays PCO119798 mRNA sequence 90 5e-15
7gb|AY112016.1| Zea mays CL52199_-1 mRNA sequence 70 5e-09
8gb|AF530914.1| Gossypium hirsutum homeodomain protein GhHOX2 mRN... 46 0.067
9gb|AC161269.4| Mus musculus BAC clone RP23-120K16 from chromosom... 44 0.27
10gb|AC121860.4| Mus musculus BAC clone RP24-105K16 from chromosom... 44 0.27
11emb|AJ250987.1|ZMA250987 Zea mays mRNA for OCL5 protein (ocl5 gene) 44 0.27
12gb|AY130425.1| Myxine glutinosa nuclear receptor subfamily 2 gro... 44 0.27
13gb|AY108675.1| Zea mays PCO066290 mRNA sequence 44 0.27
14emb|CR387989.9| Zebrafish DNA sequence from clone DKEY-101P2 in ... 42 1.1
15gb|AC099506.3| Homo sapiens chromosome 16 clone RP11-22H5, compl... 42 1.1
16dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
17dbj|AP003349.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
18dbj|AP003418.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
19gb|AC132456.5| Mus musculus BAC clone RP23-134L6 from 1, complet... 42 1.1
20emb|AL591209.17| Mouse DNA sequence from clone RP23-309H19 on ch... 42 1.1
21emb|Z46906.1|SSGGTPEP Sus scrofa 42 1.1
22gb|AY591640.1| Mus musculus clone IgK2-35 immunoglobulin kappa-l... 40 4.2
23gb|AC161812.3| Mus musculus chromosome 15, clone RP23-195I24, co... 40 4.2
24gb|AC159715.5| Mus musculus 6 BAC RP23-367A13 (Roswell Park Canc... 40 4.2
25gb|AC117418.6| Homo sapiens 3 BAC RP11-14N19 (Roswell Park Cance... 40 4.2
26gb|AC012372.4| Homo sapiens BAC clone CTD-2568K21 from 7, comple... 40 4.2
27gb|AC146208.2| Pan troglodytes BAC clone RP43-34A11 from 7, comp... 40 4.2
28gb|AC149494.4| Medicago truncatula clone mth2-116m7, complete se... 40 4.2
29emb|Z97344.2|ATFCA9 Arabidopsis thaliana DNA chromosome 4, ESSA ... 40 4.2
30emb|X61394.1|RNCCB R.norvegicus mRNA for brain calcium channel b... 40 4.2
31emb|AL161547.2|ATCHRIV47 Arabidopsis thaliana DNA chromosome 4, ... 40 4.2
32gb|AC090994.8| Homo sapiens chromosome 8, clone RP11-536K17, com... 40 4.2
33gb|AC104834.4| Mus Musculus Strain C57BL6/J Chromosome 15 RP23-2... 40 4.2
34emb|BX890589.11| Zebrafish DNA sequence from clone DKEY-14I16 in... 40 4.2
35dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.2
36gb|AC104698.2| Homo sapiens BAC clone RP11-517F1 from 2, complet... 40 4.2
37gb|AC092630.3| Homo sapiens BAC clone RP11-321C18 from 2, comple... 40 4.2
38ref|NM_017346.1| Rattus norvegicus calcium channel, voltage-depe... 40 4.2
39dbj|AP003896.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.2
40dbj|AP005620.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.2
41gb|AC154006.3| Mus musculus 6 BAC RP24-314D8 (Roswell Park Cance... 40 4.2
42gb|AC007055.3|AC007055 Homo sapiens chromosome 14 clone BAC 201F... 40 4.2
43emb|AL049780.4|CNS00007 Human chromosome 14 DNA sequence BAC R-9... 40 4.2
44emb|AJ231200.1|MMU231200 Mus musculus IgVk cu2 gene 40 4.2
45emb|AL606498.17| Mouse DNA sequence from clone RP23-197C15 on ch... 40 4.2 
>emb|AL606669.4|OSJN00106 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0060E08,
              complete sequence
          Length = 166951

 Score =  101 bits (51), Expect = 1e-18
 Identities = 63/67 (94%)
 Strand = Plus / Plus

                                                                          
Query: 249    aggtagcagcatccgagaggccgacacgaagatgaagtcaatacccgaaccaaccgccct 308
              |||||||||||||||||||||  ||| ||||| |||||||||||||||||||||||||||
Sbjct: 107244 aggtagcagcatccgagaggcgaacatgaagaggaagtcaatacccgaaccaaccgccct 107303

                     
Query: 309    tgcgtag 315
              |||||||
Sbjct: 107304 tgcgtag 107310
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  101 bits (51), Expect = 1e-18
 Identities = 63/67 (94%)
 Strand = Plus / Plus

                                                                            
Query: 249      aggtagcagcatccgagaggccgacacgaagatgaagtcaatacccgaaccaaccgccct 308
                |||||||||||||||||||||  ||| ||||| |||||||||||||||||||||||||||
Sbjct: 31934378 aggtagcagcatccgagaggcgaacatgaagaggaagtcaatacccgaaccaaccgccct 31934437

                       
Query: 309      tgcgtag 315
                |||||||
Sbjct: 31934438 tgcgtag 31934444
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>dbj|AK101563.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033050E18, full
            insert sequence
          Length = 2264

 Score =  101 bits (51), Expect = 1e-18
 Identities = 63/67 (94%)
 Strand = Plus / Minus

                                                                        
Query: 249  aggtagcagcatccgagaggccgacacgaagatgaagtcaatacccgaaccaaccgccct 308
            |||||||||||||||||||||  ||| ||||| |||||||||||||||||||||||||||
Sbjct: 2023 aggtagcagcatccgagaggcgaacatgaagaggaagtcaatacccgaaccaaccgccct 1964

                   
Query: 309  tgcgtag 315
            |||||||
Sbjct: 1963 tgcgtag 1957
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>dbj|AK065819.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013043D01, full
            insert sequence
          Length = 2343

 Score =  101 bits (51), Expect = 1e-18
 Identities = 63/67 (94%)
 Strand = Plus / Minus

                                                                        
Query: 249  aggtagcagcatccgagaggccgacacgaagatgaagtcaatacccgaaccaaccgccct 308
            |||||||||||||||||||||  ||| ||||| |||||||||||||||||||||||||||
Sbjct: 2168 aggtagcagcatccgagaggcgaacatgaagaggaagtcaatacccgaaccaaccgccct 2109

                   
Query: 309  tgcgtag 315
            |||||||
Sbjct: 2108 tgcgtag 2102
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>dbj|AB101645.1| Oryza sativa (japonica cultivar-group) Roc2 mRNA for GL2-type
            homeodomain protein, complete cds
          Length = 3063

 Score =  101 bits (51), Expect = 1e-18
 Identities = 63/67 (94%)
 Strand = Plus / Minus

                                                                        
Query: 249  aggtagcagcatccgagaggccgacacgaagatgaagtcaatacccgaaccaaccgccct 308
            |||||||||||||||||||||  ||| ||||| |||||||||||||||||||||||||||
Sbjct: 2871 aggtagcagcatccgagaggcgaacatgaagaggaagtcaatacccgaaccaaccgccct 2812

                   
Query: 309  tgcgtag 315
            |||||||
Sbjct: 2811 tgcgtag 2805
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>gb|AY107087.1| Zea mays PCO119798 mRNA sequence
          Length = 736

 Score = 89.7 bits (45), Expect = 5e-15
 Identities = 63/69 (91%)
 Strand = Plus / Minus

                                                                       
Query: 245 tcagaggtagcagcatccgagaggccgacacgaagatgaagtcaatacccgaaccaaccg 304
           ||||||| |||||||||||||||||| ||| ||||| |||||||||||||||||||||  
Sbjct: 469 tcagaggaagcagcatccgagaggccaacatgaagaggaagtcaatacccgaaccaacta 410

                    
Query: 305 cccttgcgt 313
           |||||||||
Sbjct: 409 cccttgcgt 401
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>gb|AY112016.1| Zea mays CL52199_-1 mRNA sequence
          Length = 526

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                       
Query: 245 tcagaggtagcagcatccgagaggccgacacgaagatgaagtcaatacccgaaccaaccg 304
           |||||||||||||||||||||||||| ||| | ||| |||||||||| |  |||||||  
Sbjct: 83  tcagaggtagcagcatccgagaggccaacatgtagaggaagtcaatatcttaaccaacaa 142

                      
Query: 305 cccttgcgtag 315
           |||||||||||
Sbjct: 143 cccttgcgtag 153
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>gb|AF530914.1| Gossypium hirsutum homeodomain protein GhHOX2 mRNA, complete cds
          Length = 2679

 Score = 46.1 bits (23), Expect = 0.067
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 281  tgaagtcaatacccgaaccaaccgcccttgc 311
            |||||||||||||||||||| || |||||||
Sbjct: 2616 tgaagtcaatacccgaaccacccacccttgc 2586
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>gb|AC161269.4| Mus musculus BAC clone RP23-120K16 from chromosome 15, complete sequence
          Length = 206234

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 225    aaaaaccctaaaaaagaaactcagag 250
              ||||||| ||||||||||||||||||
Sbjct: 125759 aaaaaccataaaaaagaaactcagag 125784
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>gb|AC121860.4| Mus musculus BAC clone RP24-105K16 from chromosome 15, complete
             sequence
          Length = 148328

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 225   aaaaaccctaaaaaagaaactcagag 250
             ||||||| ||||||||||||||||||
Sbjct: 14468 aaaaaccataaaaaagaaactcagag 14493
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>emb|AJ250987.1|ZMA250987 Zea mays mRNA for OCL5 protein (ocl5 gene)
          Length = 3010

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 282  gaagtcaatacccgaaccaaccgcccttgc 311
            ||||||||||||||||||| || |||||||
Sbjct: 2667 gaagtcaatacccgaaccatccccccttgc 2638
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>gb|AY130425.1| Myxine glutinosa nuclear receptor subfamily 2 group F-like (NR2F2)
           mRNA, partial sequence
          Length = 861

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 282 gaagtcaatacccgaaccaacc 303
           ||||||||||||||||||||||
Sbjct: 743 gaagtcaatacccgaaccaacc 764
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>gb|AY108675.1| Zea mays PCO066290 mRNA sequence
          Length = 654

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 282 gaagtcaatacccgaaccaaccgcccttgc 311
           ||||||||||||||||||| || |||||||
Sbjct: 320 gaagtcaatacccgaaccatccccccttgc 291
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>emb|CR387989.9| Zebrafish DNA sequence from clone DKEY-101P2 in linkage group 18,
             complete sequence
          Length = 96438

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 174   gaattacagacagactgactg 194
             |||||||||||||||||||||
Sbjct: 60930 gaattacagacagactgactg 60950
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>gb|AC099506.3| Homo sapiens chromosome 16 clone RP11-22H5, complete sequence
          Length = 186318

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 107    tttattctgctgcacctacaa 127
              |||||||||||||||||||||
Sbjct: 120156 tttattctgctgcacctacaa 120136
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 111      ttctgctgcacctacaaagca 131
                |||||||||||||||||||||
Sbjct: 39020086 ttctgctgcacctacaaagca 39020106
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>dbj|AP003349.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0674H09
          Length = 142955

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 111   ttctgctgcacctacaaagca 131
             |||||||||||||||||||||
Sbjct: 93719 ttctgctgcacctacaaagca 93739
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>dbj|AP003418.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0506A10
          Length = 145265

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 111   ttctgctgcacctacaaagca 131
             |||||||||||||||||||||
Sbjct: 38066 ttctgctgcacctacaaagca 38086
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>gb|AC132456.5| Mus musculus BAC clone RP23-134L6 from 1, complete sequence
          Length = 204402

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 82     acagacagacagatgggcaca 102
              |||||||||||||||||||||
Sbjct: 123156 acagacagacagatgggcaca 123176
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>emb|AL591209.17| Mouse DNA sequence from clone RP23-309H19 on chromosome 11, complete
             sequence
          Length = 199634

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 82    acagacagacagatgggcaca 102
             |||||||||||||||||||||
Sbjct: 82303 acagacagacagatgggcaca 82323
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>emb|Z46906.1|SSGGTPEP Sus scrofa
          Length = 16331

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 233   taaaaaagaaactcagaggta 253
             |||||||||||||||||||||
Sbjct: 12980 taaaaaagaaactcagaggta 13000
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>gb|AY591640.1| Mus musculus clone IgK2-35 immunoglobulin kappa-like gene, partial
            sequence
          Length = 2723

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 65   acccacaatccaaagcaaca 84
            ||||||||||||||||||||
Sbjct: 1051 acccacaatccaaagcaaca 1032
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>gb|AC161812.3| Mus musculus chromosome 15, clone RP23-195I24, complete sequence
          Length = 204464

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 82     acagacagacagatgggcac 101
              ||||||||||||||||||||
Sbjct: 164899 acagacagacagatgggcac 164918
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>gb|AC159715.5| Mus musculus 6 BAC RP23-367A13 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 209869

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 65    acccacaatccaaagcaaca 84
             ||||||||||||||||||||
Sbjct: 31103 acccacaatccaaagcaaca 31122
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>gb|AC117418.6| Homo sapiens 3 BAC RP11-14N19 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 53666

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 230   ccctaaaaaagaaactcaga 249
             ||||||||||||||||||||
Sbjct: 18243 ccctaaaaaagaaactcaga 18262
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>gb|AC012372.4| Homo sapiens BAC clone CTD-2568K21 from 7, complete sequence
          Length = 91573

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 16    tttgggattgaaatggcgac 35
             ||||||||||||||||||||
Sbjct: 31552 tttgggattgaaatggcgac 31533
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>gb|AC146208.2| Pan troglodytes BAC clone RP43-34A11 from 7, complete sequence
          Length = 169225

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 16    tttgggattgaaatggcgac 35
             ||||||||||||||||||||
Sbjct: 92014 tttgggattgaaatggcgac 92033
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>gb|AC149494.4| Medicago truncatula clone mth2-116m7, complete sequence
          Length = 95710

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 283   aagtcaatacccgaaccaac 302
             ||||||||||||||||||||
Sbjct: 87721 aagtcaatacccgaaccaac 87702
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>emb|Z97344.2|ATFCA9 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 9
          Length = 81835

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 282   gaagtcaatacccgaaccaa 301
             ||||||||||||||||||||
Sbjct: 21460 gaagtcaatacccgaaccaa 21479
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>emb|X61394.1|RNCCB R.norvegicus mRNA for brain calcium channel beta subunit
          Length = 3293

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 82   acagacagacagatgggcac 101
            ||||||||||||||||||||
Sbjct: 3190 acagacagacagatgggcac 3171
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>emb|AL161547.2|ATCHRIV47 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 47
          Length = 198067

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 282   gaagtcaatacccgaaccaa 301
             ||||||||||||||||||||
Sbjct: 16472 gaagtcaatacccgaaccaa 16491
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>gb|AC090994.8| Homo sapiens chromosome 8, clone RP11-536K17, complete sequence
          Length = 200326

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 50    gctacaaaattataaaccca 69
             ||||||||||||||||||||
Sbjct: 19155 gctacaaaattataaaccca 19136
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>gb|AC104834.4| Mus Musculus Strain C57BL6/J Chromosome 15 RP23-274F23, complete sequence
          Length = 215113

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 82     acagacagacagatgggcac 101
              ||||||||||||||||||||
Sbjct: 115134 acagacagacagatgggcac 115115
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>emb|BX890589.11| Zebrafish DNA sequence from clone DKEY-14I16 in linkage group 5, complete
              sequence
          Length = 204925

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 81     aacagacagacagatgggca 100
              ||||||||||||||||||||
Sbjct: 186637 aacagacagacagatgggca 186618
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 284     agtcaatacccgaaccaacc 303
               ||||||||||||||||||||
Sbjct: 2027850 agtcaatacccgaaccaacc 2027869
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>gb|AC104698.2| Homo sapiens BAC clone RP11-517F1 from 2, complete sequence
          Length = 115170

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 233   taaaaaagaaactcagaggtagca 256
             |||||||||||||||| |||||||
Sbjct: 23084 taaaaaagaaactcaggggtagca 23107
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>gb|AC092630.3| Homo sapiens BAC clone RP11-321C18 from 2, complete sequence
          Length = 185947

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 231   cctaaaaaagaaactcagag 250
             ||||||||||||||||||||
Sbjct: 51707 cctaaaaaagaaactcagag 51688
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>ref|NM_017346.1| Rattus norvegicus calcium channel, voltage-dependent, beta 1 subunit
            (Cacnb1), mRNA
          Length = 3293

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 82   acagacagacagatgggcac 101
            ||||||||||||||||||||
Sbjct: 3190 acagacagacagatgggcac 3171
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>dbj|AP003896.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1613_G04
          Length = 135357

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 284   agtcaatacccgaaccaacc 303
             ||||||||||||||||||||
Sbjct: 21380 agtcaatacccgaaccaacc 21399
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>dbj|AP005620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0680F05
          Length = 185495

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 284    agtcaatacccgaaccaacc 303
              ||||||||||||||||||||
Sbjct: 153048 agtcaatacccgaaccaacc 153067
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>gb|AC154006.3| Mus musculus 6 BAC RP24-314D8 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 151766

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 65    acccacaatccaaagcaaca 84
             ||||||||||||||||||||
Sbjct: 99586 acccacaatccaaagcaaca 99605
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>gb|AC007055.3|AC007055 Homo sapiens chromosome 14 clone BAC 201F1 map 14q24.3, complete
             sequence
          Length = 199927

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 9     cacacattttgggattgaaatggc 32
             ||||||||||| ||||||||||||
Sbjct: 40854 cacacattttgagattgaaatggc 40831
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>emb|AL049780.4|CNS00007 Human chromosome 14 DNA sequence BAC R-950C14 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 195891

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 9     cacacattttgggattgaaatggc 32
             ||||||||||| ||||||||||||
Sbjct: 86032 cacacattttgagattgaaatggc 86055
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>emb|AJ231200.1|MMU231200 Mus musculus IgVk cu2 gene
          Length = 905

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 65  acccacaatccaaagcaaca 84
           ||||||||||||||||||||
Sbjct: 167 acccacaatccaaagcaaca 148
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>emb|AL606498.17| Mouse DNA sequence from clone RP23-197C15 on chromosome 11, complete
              sequence
          Length = 222330

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 76     aaagcaacagacagacagat 95
              ||||||||||||||||||||
Sbjct: 109680 aaagcaacagacagacagat 109661


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,758,675
Number of Sequences: 3902068
Number of extensions: 3758675
Number of successful extensions: 93097
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 92924
Number of HSP's gapped (non-prelim): 173
length of query: 316
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 294
effective length of database: 17,147,199,772
effective search space: 5041276732968
effective search space used: 5041276732968
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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