>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 189      aatcatgaaaaccaaaaggtgt 210
                ||||||||||||||||||||||
Sbjct: 19632474 aatcatgaaaaccaaaaggtgt 19632453

>gb|AC128715.5| Homo sapiens 3 BAC RP11-727B20 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 100845

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 58    aaaatacactcacagctgatca 79
             ||||||||||||||||||||||
Sbjct: 30818 aaaatacactcacagctgatca 30797

>gb|AC116442.3| Homo sapiens chromosome 3 clone RP11-534H12, complete sequence
          Length = 175610

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 58     aaaatacactcacagctgatca 79
              ||||||||||||||||||||||
Sbjct: 110158 aaaatacactcacagctgatca 110137

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 189      aatcatgaaaaccaaaaggtgt 210
                ||||||||||||||||||||||
Sbjct: 19625501 aatcatgaaaaccaaaaggtgt 19625480

>gb|AC091234.7| Oryza sativa chromosome 3 BAC OSJNBa0057E11 genomic sequence, complete
             sequence
          Length = 138716

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 189   aatcatgaaaaccaaaaggtgt 210
             ||||||||||||||||||||||
Sbjct: 43285 aatcatgaaaaccaaaaggtgt 43306

>gb|AC099055.2| Homo sapiens chromosome 3 clone RP11-527L9, complete sequence
          Length = 155962

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 50    ctttccctaaaatacactcac 70
             |||||||||||||||||||||
Sbjct: 17313 ctttccctaaaatacactcac 17333

>gb|AC113420.2| Homo sapiens chromosome 5 clone RP11-586E1, complete sequence
          Length = 176267

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 193   atgaaaaccaaaaggtgtttt 213
             |||||||||||||||||||||
Sbjct: 43274 atgaaaaccaaaaggtgtttt 43294

>gb|AC025445.5| Homo sapiens chromosome 5 clone CTD-2049O17, complete sequence
          Length = 184635

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 193    atgaaaaccaaaaggtgtttt 213
              |||||||||||||||||||||
Sbjct: 169396 atgaaaaccaaaaggtgtttt 169416

>gb|AC154231.2| Mus musculus BAC clone RP24-339I11 from chromosome 13, complete sequence
          Length = 141075

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 299    ttgctggttccatctgcactg 319
              |||||||||||||||||||||
Sbjct: 114898 ttgctggttccatctgcactg 114878

>emb|AL844526.5| Mouse DNA sequence from clone RP23-201O18 on chromosome 2, complete
             sequence
          Length = 204398

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 42    tttgaagactttccctaaaat 62
             |||||||||||||||||||||
Sbjct: 20873 tttgaagactttccctaaaat 20853

>gb|AC004970.2| Homo sapiens BAC clone RP5-1122F4 from 7, complete sequence
          Length = 149951

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 15     taaatccacagagcatatgg 34
              ||||||||||||||||||||
Sbjct: 115778 taaatccacagagcatatgg 115797

>gb|AC126043.3| Mus musculus BAC clone RP24-356N5 from chromosome 13, complete sequence
          Length = 140207

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 32    tgggcagggctttgaagact 51
             ||||||||||||||||||||
Sbjct: 52928 tgggcagggctttgaagact 52947

>emb|AL158198.14| Human DNA sequence from clone RP11-239H6 on chromosome 6 Contains the
             5' end of the gene for a novel protein, a novel gene, a
             pseudogene similar to tropomysin and a CpG island,
             complete sequence
          Length = 173456

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 253   cctcagtcactctgctccag 272
             ||||||||||||||||||||
Sbjct: 86747 cctcagtcactctgctccag 86728

>emb|AL160404.7| Human DNA sequence from clone RP1-318G22 on chromosome 6, complete
            sequence
          Length = 27503

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 253  cctcagtcactctgctccag 272
            ||||||||||||||||||||
Sbjct: 8276 cctcagtcactctgctccag 8257

>gb|AC154318.3| Mus musculus BAC clone RP23-316D19 from chromosome 12, complete
             sequence
          Length = 176391

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 50    ctttccctaaaatacactca 69
             ||||||||||||||||||||
Sbjct: 72847 ctttccctaaaatacactca 72866

>gb|AC087116.13| Mus Musculus Strain C57BL6/J Chromosome 15~RP23-336B1, complete sequence
          Length = 218476

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 148    tagagatgcagcaggggtag 167
              ||||||||||||||||||||
Sbjct: 103082 tagagatgcagcaggggtag 103063

>gb|AF345521.1| TT virus isolate TCHN-G1 Orf2 and Orf1 genes, complete cds
          Length = 3239

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 307  tccatctgcactgccagtac 326
            ||||||||||||||||||||
Sbjct: 2168 tccatctgcactgccagtac 2149

>emb|CR406404.1| Gallus gallus finished cDNA, clone ChEST834i13
          Length = 1607

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 41 ctttgaagactttccctaaaatac 64
          |||||||||||||| |||||||||
Sbjct: 28 ctttgaagactttctctaaaatac 51

>dbj|AB073158.1| Arabidopsis thaliana DNA, chromosome 4 centromere region, BAC
             clone:T24C1
          Length = 90840

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 146   gctagagatgcagcaggggt 165
             ||||||||||||||||||||
Sbjct: 73309 gctagagatgcagcaggggt 73328

>gb|AC154783.2| Mus musculus BAC clone RP24-466C8 from 12, complete sequence
          Length = 167125

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 50    ctttccctaaaatacactca 69
             ||||||||||||||||||||
Sbjct: 37260 ctttccctaaaatacactca 37241


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,141,311
Number of Sequences: 3902068
Number of extensions: 3141311
Number of successful extensions: 56974
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 56920
Number of HSP's gapped (non-prelim): 54
length of query: 356
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 334
effective length of database: 17,147,199,772
effective search space: 5727164723848
effective search space used: 5727164723848
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)