>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 85.7 bits (43), Expect = 8e-14
 Identities = 76/87 (87%)
 Strand = Plus / Minus

                                                                           
Query: 87      ctacacaaacctaaaaaggaacaacatatggcaactgatagagatgaaggtcaggcaaat 146
               ||||||||||||| || ||||| ||||||||||||||||||| ||||||||| || ||||
Sbjct: 7452628 ctacacaaacctagaatggaaccacatatggcaactgatagacatgaaggtctggtaaat 7452569

                                          
Query: 147     gaatggcccttggttgccatgaaaact 173
               |||| ||||| || ||| |||| ||||
Sbjct: 7452568 gaatcgccctaggctgcaatgagaact 7452542

>gb|AC136136.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0071C04, from chromosome 3, complete sequence
          Length = 126078

 Score = 85.7 bits (43), Expect = 8e-14
 Identities = 76/87 (87%)
 Strand = Plus / Minus

                                                                         
Query: 87    ctacacaaacctaaaaaggaacaacatatggcaactgatagagatgaaggtcaggcaaat 146
             ||||||||||||| || ||||| ||||||||||||||||||| ||||||||| || ||||
Sbjct: 91183 ctacacaaacctagaatggaaccacatatggcaactgatagacatgaaggtctggtaaat 91124

                                        
Query: 147   gaatggcccttggttgccatgaaaact 173
             |||| ||||| || ||| |||| ||||
Sbjct: 91123 gaatcgccctaggctgcaatgagaact 91097

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 85.7 bits (43), Expect = 8e-14
 Identities = 76/87 (87%)
 Strand = Plus / Minus

                                                                           
Query: 87      ctacacaaacctaaaaaggaacaacatatggcaactgatagagatgaaggtcaggcaaat 146
               ||||||||||||| || ||||| ||||||||||||||||||| ||||||||| || ||||
Sbjct: 7450463 ctacacaaacctagaatggaaccacatatggcaactgatagacatgaaggtctggtaaat 7450404

                                          
Query: 147     gaatggcccttggttgccatgaaaact 173
               |||| ||||| || ||| |||| ||||
Sbjct: 7450403 gaatcgccctaggctgcaatgagaact 7450377

>dbj|AK064767.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000A02, full
            insert sequence
          Length = 2755

 Score = 85.7 bits (43), Expect = 8e-14
 Identities = 76/87 (87%)
 Strand = Plus / Minus

                                                                        
Query: 87   ctacacaaacctaaaaaggaacaacatatggcaactgatagagatgaaggtcaggcaaat 146
            ||||||||||||| || ||||| ||||||||||||||||||| ||||||||| || ||||
Sbjct: 2572 ctacacaaacctagaatggaaccacatatggcaactgatagacatgaaggtctggtaaat 2513

                                       
Query: 147  gaatggcccttggttgccatgaaaact 173
            |||| ||||| || ||| |||| ||||
Sbjct: 2512 gaatcgccctaggctgcaatgagaact 2486

>dbj|AK058297.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-F05, full
           insert sequence
          Length = 1130

 Score = 85.7 bits (43), Expect = 8e-14
 Identities = 76/87 (87%)
 Strand = Plus / Minus

                                                                       
Query: 87  ctacacaaacctaaaaaggaacaacatatggcaactgatagagatgaaggtcaggcaaat 146
           ||||||||||||| || ||||| ||||||||||||||||||| ||||||||| || ||||
Sbjct: 927 ctacacaaacctagaatggaaccacatatggcaactgatagacatgaaggtctggtaaat 868

                                      
Query: 147 gaatggcccttggttgccatgaaaact 173
           |||| ||||| || ||| |||| ||||
Sbjct: 867 gaatcgccctaggctgcaatgagaact 841

>gb|AC079128.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBa0056A20, complete sequence
          Length = 151163

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 47/54 (87%)
 Strand = Plus / Minus

                                                                   
Query: 94    aacctaaaaaggaacaacatatggcaactgatagagatgaaggtcaggcaaatg 147
             |||||||||||| |||||| | |||| |||||| | | ||||||||||||||||
Sbjct: 33586 aacctaaaaaggcacaacaaacggcagctgatacataagaaggtcaggcaaatg 33533

>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
               Pseudo10p0.0-10p4.4, complete sequence
          Length = 2331000

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 47/54 (87%)
 Strand = Plus / Minus

                                                                     
Query: 94      aacctaaaaaggaacaacatatggcaactgatagagatgaaggtcaggcaaatg 147
               |||||||||||| |||||| | |||| |||||| | | ||||||||||||||||
Sbjct: 1515013 aacctaaaaaggcacaacaaacggcagctgatacataagaaggtcaggcaaatg 1514960

>gb|AC131967.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAa0049K09,
              complete sequence
          Length = 154181

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 47/54 (87%)
 Strand = Plus / Minus

                                                                    
Query: 94     aacctaaaaaggaacaacatatggcaactgatagagatgaaggtcaggcaaatg 147
              |||||||||||| |||||| | |||| |||||| | | ||||||||||||||||
Sbjct: 127767 aacctaaaaaggcacaacaaacggcagctgatacataagaaggtcaggcaaatg 127714

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 47/54 (87%)
 Strand = Plus / Minus

                                                                     
Query: 94      aacctaaaaaggaacaacatatggcaactgatagagatgaaggtcaggcaaatg 147
               |||||||||||| |||||| | |||| |||||| | | ||||||||||||||||
Sbjct: 1515013 aacctaaaaaggcacaacaaacggcagctgatacataagaaggtcaggcaaatg 1514960

>dbj|AK120792.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023011O11, full
            insert sequence
          Length = 1905

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 47/54 (87%)
 Strand = Plus / Minus

                                                                  
Query: 94   aacctaaaaaggaacaacatatggcaactgatagagatgaaggtcaggcaaatg 147
            |||||||||||| |||||| | |||| |||||| | | ||||||||||||||||
Sbjct: 1723 aacctaaaaaggcacaacaaacggcagctgatacataagaaggtcaggcaaatg 1670

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 47/54 (87%)
 Strand = Plus / Minus

                                                                     
Query: 94      aacctaaaaaggaacaacatatggcaactgatagagatgaaggtcaggcaaatg 147
               |||||||||||| |||||| | |||| |||||| | | ||||||||||||||||
Sbjct: 1515010 aacctaaaaaggcacaacaaacggcagctgatacataagaaggtcaggcaaatg 1514957

>ref|NM_194677.1| Oryza sativa (japonica cultivar-group) unknown protein
            (OSJNBa0056A20.6), mRNA
          Length = 1563

 Score = 46.1 bits (23), Expect = 0.065
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                               
Query: 97   ctaaaaaggaacaacatatggcaactgatagagatgaaggtcaggcaaatg 147
            ||||||||| |||||| | |||| |||||| | | ||||||||||||||||
Sbjct: 1563 ctaaaaaggcacaacaaacggcagctgatacataagaaggtcaggcaaatg 1513

>gb|AC161760.4| Mus musculus BAC clone RP23-428J22 from chromosome 14, complete sequence
          Length = 187639

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 212    ctgctgctgatgctggcatcaggtttcttt 241
              |||||||||||||| ||||||| |||||||
Sbjct: 142571 ctgctgctgatgcttgcatcagatttcttt 142542

>gb|AY752793.1| Culicoides sonorensis clone CsARU unknown mRNA
          Length = 569

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 162 gccatgaaaactccagctcca 182
           |||||||||||||||||||||
Sbjct: 416 gccatgaaaactccagctcca 396

>ref|XM_878436.1| PREDICTED: Bos taurus similar to phosphatidylinositol glycan, class
           Q isoform 2, transcript variant 2 (LOC508048), mRNA
          Length = 2049

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 211 gctgctgctgatgctggcatc 231
           |||||||||||||||||||||
Sbjct: 458 gctgctgctgatgctggcatc 478

>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 198     cacttgccttgcagctgctgc 218
               |||||||||||||||||||||
Sbjct: 3946932 cacttgccttgcagctgctgc 3946912



 Score = 40.1 bits (20), Expect = 4.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 201     ttgccttgcagctgctgctgatgctggc 228
               |||||||||||| ||||||| |||||||
Sbjct: 1711629 ttgccttgcagcagctgctggtgctggc 1711656

>gb|AC101763.8| Mus musculus chromosome 1, clone RP24-468E2, complete sequence
          Length = 143657

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 212   ctgctgctgatgctggcatc 231
             ||||||||||||||||||||
Sbjct: 87327 ctgctgctgatgctggcatc 87346

>gb|AY533230.1| Chinchilla lanigera ribosomal protein S27a mRNA, partial cds
          Length = 404

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 162 gccatgaaaactccagctcc 181
           ||||||||||||||||||||
Sbjct: 275 gccatgaaaactccagctcc 256

>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 203     gccttgcagctgctgctgatgctg 226
               ||||||| ||||||||||||||||
Sbjct: 2581293 gccttgccgctgctgctgatgctg 2581270

>gb|AC124731.5| Mus musculus BAC clone RP23-287B7 from 3, complete sequence
          Length = 201529

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 212    ctgctgctgatgctggcatc 231
              ||||||||||||||||||||
Sbjct: 157068 ctgctgctgatgctggcatc 157049

>emb|AL772202.14| Human DNA sequence from clone RP11-791O21 on chromosome 9 Contains a
             PEST-containing nuclear protein (PEST) pseudogene, a novel
             gene (FLJ37523), a novel gene, the EDG3 gene for
             endothelial differentiation, sphingolipid
             G-protein-coupled receptor, 3 and a CpG island, complete
             sequence
          Length = 55956

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 126   agagatgaaggtcaggcaaa 145
             ||||||||||||||||||||
Sbjct: 16979 agagatgaaggtcaggcaaa 16998

>emb|AL844602.6| Mouse DNA sequence from clone RP24-251H18 on chromosome 4, complete
             sequence
          Length = 116028

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 212   ctgctgctgatgctggcatc 231
             ||||||||||||||||||||
Sbjct: 90636 ctgctgctgatgctggcatc 90655

>emb|BX649535.7| Zebrafish DNA sequence from clone DKEY-234E12 in linkage group 3,
             complete sequence
          Length = 151079

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 154   ccttggttgccatgaaaact 173
             ||||||||||||||||||||
Sbjct: 25482 ccttggttgccatgaaaact 25463

>ref|NM_001032408.1| Drosophila melanogaster kayak CG33956-RD, transcript variant D
           (kay), mRNA
          Length = 3261

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 207 tgcagctgctgctgatgctg 226
           ||||||||||||||||||||
Sbjct: 116 tgcagctgctgctgatgctg 97

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 211      gctgctgctgatgctggcat 230
                ||||||||||||||||||||
Sbjct: 24045668 gctgctgctgatgctggcat 24045687

>gb|AC007892.4|AC007892 Drosophila melanogaster, chromosome 3R, region 99B-99B, BAC clone
              BACR02O03, complete sequence
          Length = 202929

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 207    tgcagctgctgctgatgctg 226
              ||||||||||||||||||||
Sbjct: 121934 tgcagctgctgctgatgctg 121915

>gb|AF483190.1| Melaleuca alternifolia isopentenyl pyrophosphate isomerase IDI2
           (idi2) mRNA, complete cds
          Length = 1063

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 211 gctgctgctgatgctggcat 230
           ||||||||||||||||||||
Sbjct: 50  gctgctgctgatgctggcat 69

>gb|AC146977.22| Mus musculus chromosome 13, clone RP23-106I12, complete sequence
          Length = 200131

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 212    ctgctgctgatgctggcatc 231
              ||||||||||||||||||||
Sbjct: 196152 ctgctgctgatgctggcatc 196133

>dbj|AP003626.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0429G06
          Length = 158321

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 211   gctgctgctgatgctggcat 230
             ||||||||||||||||||||
Sbjct: 55361 gctgctgctgatgctggcat 55380

>gb|AC155850.6| Mus musculus 6 BAC RP24-545D3 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 195675

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 212    ctgctgctgatgctggcatc 231
              ||||||||||||||||||||
Sbjct: 182906 ctgctgctgatgctggcatc 182887

>gb|AC153636.2| Mus musculus 6 BAC RP23-76E12 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 164242

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 212   ctgctgctgatgctggcatc 231
             ||||||||||||||||||||
Sbjct: 35723 ctgctgctgatgctggcatc 35704

>gb|AE003771.3| Drosophila melanogaster chromosome 3R, section 109 of 118 of the
             complete sequence
          Length = 242528

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 207   tgcagctgctgctgatgctg 226
             ||||||||||||||||||||
Sbjct: 33164 tgcagctgctgctgatgctg 33145

>emb|BX537149.1| Mouse DNA sequence from clone RP23-251H18 on chromosome 4, complete
             sequence
          Length = 112029

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 212   ctgctgctgatgctggcatc 231
             ||||||||||||||||||||
Sbjct: 88637 ctgctgctgatgctggcatc 88656

>emb|CT030657.5| Mouse DNA sequence from clone RP23-142A12 on chromosome 13, complete
              sequence
          Length = 201402

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 212    ctgctgctgatgctggcatc 231
              ||||||||||||||||||||
Sbjct: 133587 ctgctgctgatgctggcatc 133606

>gb|AF440523.1| Pseudomonas aeruginosa strain C genomic sequence, gene island PAGI-2(C)
          Length = 158230

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 203   gccttgcagctgctgctgatgctg 226
             ||||||| ||||||||||||||||
Sbjct: 59577 gccttgccgctgctgctgatgctg 59600


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,065,707
Number of Sequences: 3902068
Number of extensions: 3065707
Number of successful extensions: 76969
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 76728
Number of HSP's gapped (non-prelim): 241
length of query: 306
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 284
effective length of database: 17,147,199,772
effective search space: 4869804735248
effective search space used: 4869804735248
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)