Clone Name | rbastl22a08 |
---|---|
Clone Library Name | barley_pub |
>gb|AC010168.6| Homo sapiens 12p12-31.7-32.2 BAC RP11-174G6 (Rosewell Park Cancer Institute Human Bac Library) complete sequence Length = 104926 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 tgaagaccatgggtccccaaa 102 ||||||||||||||||||||| Sbjct: 7589 tgaagaccatgggtccccaaa 7609
>emb|CR390310.1| Gallus gallus finished cDNA, clone ChEST234p17 Length = 1645 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 222 gtatgaaaacagccattcctt 242 ||||||||||||||||||||| Sbjct: 495 gtatgaaaacagccattcctt 475
>gb|AC101684.13| Mus musculus chromosome 1, clone RP23-187I13, complete sequence Length = 227440 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 tgctcacccacatgctcatc 373 |||||||||||||||||||| Sbjct: 100132 tgctcacccacatgctcatc 100113
>gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Philadelphia 1, complete genome Length = 3397754 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 cataaaatctcctcaaatcg 309 |||||||||||||||||||| Sbjct: 2242391 cataaaatctcctcaaatcg 2242410
>emb|CR628337.1| Legionella pneumophila str. Lens complete genome Length = 3345687 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 cataaaatctcctcaaatcg 309 |||||||||||||||||||| Sbjct: 2219850 cataaaatctcctcaaatcg 2219869
>emb|CR628336.1| Legionella pneumophila str. Paris complete genome Length = 3503610 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 cataaaatctcctcaaatcg 309 |||||||||||||||||||| Sbjct: 2246357 cataaaatctcctcaaatcg 2246376
>gb|AC121334.5| Homo sapiens 12 BAC RP11-242C24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 185847 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 ggccaccgtaaataaaaatt 45 |||||||||||||||||||| Sbjct: 163574 ggccaccgtaaataaaaatt 163593
>gb|AY941322.1| Glarea lozoyensis polyketide syntase 2 (pks2) gene, complete cds Length = 9951 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 383 gtcgctagctggttcagcaa 402 |||||||||||||||||||| Sbjct: 4397 gtcgctagctggttcagcaa 4378
>gb|AC079171.22| Homo sapiens X BAC RP11-791M20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 147895 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 tatcggtgtccatttgctca 359 |||||||||||||||||||| Sbjct: 144817 tatcggtgtccatttgctca 144836
>emb|BX322614.3| Zebrafish DNA sequence from clone CH211-215G1 in linkage group 16, complete sequence Length = 199783 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 aacactgcaaaaactctcca 198 |||||||||||||||||||| Sbjct: 150402 aacactgcaaaaactctcca 150383 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,527,588 Number of Sequences: 3902068 Number of extensions: 3527588 Number of successful extensions: 55462 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 55400 Number of HSP's gapped (non-prelim): 62 length of query: 413 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 391 effective length of database: 17,147,199,772 effective search space: 6704555110852 effective search space used: 6704555110852 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)