Clone Name | rbastl22a06 |
---|---|
Clone Library Name | barley_pub |
>gb|AY108792.1| Zea mays PCO102846 mRNA sequence Length = 521 Score = 77.8 bits (39), Expect = 3e-11 Identities = 153/191 (80%) Strand = Plus / Minus Query: 152 ctccagtccatgatcgctgaccggagcgagtggttggggatgaggctcctgctcggcagc 211 ||||||||||||||||| || || || ||||| || || || |||||| || | |||| Sbjct: 466 ctccagtccatgatcgcagaacgaagggagtgattcggtatcaggctcttgttgggcaaa 407 Query: 212 cgcaggttggtcatcggcgacttgtccttcatgctcacccacgtctcgatcgccttccgg 271 ||||||||||||||||| ||| | || ||| |||||| |||| ||| |||||||| | | Sbjct: 406 cgcaggttggtcatcggggacgtctcgttcgtgctcagccacagctcaatcgccttgccg 347 Query: 272 tcgtacgtgtacccgtcggcggcgacgcatgggtcctccatgatttcctgaagaatgggg 331 ||||| ||||| || || | |||||| |||| || |||| | ||||||||| |||||| Sbjct: 346 tcgtaggtgtagccatctgacgcgacgtatggatcgaccatcacttcctgaagtatgggg 287 Query: 332 cagaggaaatg 342 |||| |||||| Sbjct: 286 cagatgaaatg 276
>gb|AY224495.1| Oryza sativa (japonica cultivar-group) isolate 31017 putative serine/threonine protein kinase mRNA, partial cds Length = 1344 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Minus Query: 221 gtcatcggcgacttgtccttcatgctcacccacgtctcgatcgccttccggtcgtacgtg 280 ||||| || |||||||| ||||| || | |||| |||||||||||||||||| || ||| Sbjct: 1265 gtcataggggacttgtcattcatacttagccacagctcgatcgccttccggtcatatgtg 1206 Query: 281 taccc 285 ||||| Sbjct: 1205 taccc 1201
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Plus Query: 221 gtcatcggcgacttgtccttcatgctcacccacgtctcgatcgccttccggtcgtacgtg 280 ||||| || |||||||| ||||| || | |||| |||||||||||||||||| || ||| Sbjct: 2139503 gtcataggggacttgtcattcatacttagccacagctcgatcgccttccggtcatatgtg 2139562 Query: 281 taccc 285 ||||| Sbjct: 2139563 taccc 2139567
>dbj|AP003708.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0041F13 Length = 163230 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Plus Query: 221 gtcatcggcgacttgtccttcatgctcacccacgtctcgatcgccttccggtcgtacgtg 280 ||||| || |||||||| ||||| || | |||| |||||||||||||||||| || ||| Sbjct: 160365 gtcataggggacttgtcattcatacttagccacagctcgatcgccttccggtcatatgtg 160424 Query: 281 taccc 285 ||||| Sbjct: 160425 taccc 160429
>dbj|AK105657.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-G08, full insert sequence Length = 1405 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Minus Query: 221 gtcatcggcgacttgtccttcatgctcacccacgtctcgatcgccttccggtcgtacgtg 280 ||||| || |||||||| ||||| || | |||| |||||||||||||||||| || ||| Sbjct: 1200 gtcataggggacttgtcattcatacttagccacagctcgatcgccttccggtcatatgtg 1141 Query: 281 taccc 285 ||||| Sbjct: 1140 taccc 1136
>dbj|AK065683.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013037K06, full insert sequence Length = 2936 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Minus Query: 221 gtcatcggcgacttgtccttcatgctcacccacgtctcgatcgccttccggtcgtacgtg 280 ||||| || |||||||| ||||| || | |||| |||||||||||||||||| || ||| Sbjct: 2480 gtcataggggacttgtcattcatacttagccacagctcgatcgccttccggtcatatgtg 2421 Query: 281 taccc 285 ||||| Sbjct: 2420 taccc 2416
>gb|AC109462.2| Homo sapiens chromosome 16 clone RP11-26L20, complete sequence Length = 174191 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 235 gtccttcatgctcacccacgtctc 258 |||||||||||||||||||||||| Sbjct: 105904 gtccttcatgctcacccacgtctc 105927
>gb|AC009165.6|AC009165 Homo sapiens chromosome 16 clone RP11-7O2, complete sequence Length = 152225 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 235 gtccttcatgctcacccacgtctc 258 |||||||||||||||||||||||| Sbjct: 56658 gtccttcatgctcacccacgtctc 56681
>gb|AC092722.5| Homo sapiens chromosome 16 clone RP11-517M14, complete sequence Length = 189822 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Minus Query: 235 gtccttcatgctcacccacgtctc 258 |||||||||||||||||||||||| Sbjct: 126954 gtccttcatgctcacccacgtctc 126931
>gb|AC072061.8| Homo sapiens BAC clone RP11-467D6 from 7, complete sequence Length = 167852 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 22 attcacattttgattttctttt 43 |||||||||||||||||||||| Sbjct: 29154 attcacattttgattttctttt 29175
>ref|NM_166323.1| Drosophila melanogaster CG30125-RA (CG30125), mRNA Length = 1812 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 91 aatctatagtagtatttgcgaagact 116 |||||||||| ||||||||||||||| Sbjct: 611 aatctatagttgtatttgcgaagact 586
>gb|AC148823.4| Pan troglodytes BAC clone CH251-558F7 from chromosome 7, complete sequence Length = 130069 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 22 attcacattttgattttctttt 43 |||||||||||||||||||||| Sbjct: 96664 attcacattttgattttctttt 96685
>gb|AC007839.4|AC007839 Drosophila melanogaster, chromosome 2R, region 56B1-56C4, BAC clone BACR01N09, complete sequence Length = 161172 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 91 aatctatagtagtatttgcgaagact 116 |||||||||| ||||||||||||||| Sbjct: 41093 aatctatagttgtatttgcgaagact 41118
>gb|AE003797.3| Drosophila melanogaster chromosome 2R, section 53 of 73 of the complete sequence Length = 306854 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 91 aatctatagtagtatttgcgaagact 116 |||||||||| ||||||||||||||| Sbjct: 223929 aatctatagttgtatttgcgaagact 223954
>gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome Length = 4607203 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 391 cttcgtctccctggctgccctggct 415 |||||||| |||||||||||||||| Sbjct: 2538449 cttcgtcttcctggctgccctggct 2538473
>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome Length = 4639675 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 391 cttcgtctccctggctgccctggct 415 |||||||| |||||||||||||||| Sbjct: 2539167 cttcgtcttcctggctgccctggct 2539191
>emb|AL157932.21| Human DNA sequence from clone RP11-187A9 on chromosome 13 Contains part of a novel gene, the 5' end of the DGKH gene for diacylglycerol kinase eta, a mitogen-activated protein kinase 6 (MAPK6) pseudogene and 2 CpG islands, complete sequence Length = 67309 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 23 ttcacattttgattttctttt 43 ||||||||||||||||||||| Sbjct: 60944 ttcacattttgattttctttt 60964
>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome Length = 4646332 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 391 cttcgtctccctggctgccctggct 415 |||||||| |||||||||||||||| Sbjct: 2546591 cttcgtcttcctggctgccctggct 2546615
>ref|NG_002453.1| Homo sapiens mitogen-activated protein kinase 6 pseudogene 3 (MAPK6PS3) on chromosome 13 Length = 4345 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 23 ttcacattttgattttctttt 43 ||||||||||||||||||||| Sbjct: 2349 ttcacattttgattttctttt 2329
>gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome Length = 4599354 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 391 cttcgtctccctggctgccctggct 415 |||||||| |||||||||||||||| Sbjct: 2516582 cttcgtcttcctggctgccctggct 2516606
>emb|CR854848.7| Zebrafish DNA sequence from clone DKEY-287E13 in linkage group 15, complete sequence Length = 31765 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 54 attcacattttcagtatggct 74 ||||||||||||||||||||| Sbjct: 24537 attcacattttcagtatggct 24517
>gb|CP000036.1| Shigella boydii Sb227, complete genome Length = 4519823 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 391 cttcgtctccctggctgccctggct 415 |||||||| |||||||||||||||| Sbjct: 2439494 cttcgtcttcctggctgccctggct 2439518
>gb|CP000038.1| Shigella sonnei Ss046, complete genome Length = 4825265 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 391 cttcgtctccctggctgccctggct 415 |||||||| |||||||||||||||| Sbjct: 2650216 cttcgtcttcctggctgccctggct 2650240
>gb|M32101.1|ECOCYS E.coli thiosulfate binding protein (cysP), sulfate permease (cysT, cysW, cysA) and o-acetylserine (thiol)-lyase-B (cysM) genes, complete cds Length = 5755 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 391 cttcgtctccctggctgccctggct 415 |||||||| |||||||||||||||| Sbjct: 2942 cttcgtcttcctggctgccctggct 2918
>gb|AC102795.28| Mus musculus chromosome 3, clone RP23-182B7, complete sequence Length = 226270 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 212725 gaatggggcagaggaaatgc 212744
>gb|AC166652.6| Mus musculus chromosome 8, clone RP24-129F24, complete sequence Length = 164098 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 8523 gaatggggcagaggaaatgc 8504
>gb|AC160761.6| Mus musculus BAC clone RP24-163J22 from chromosome 7, complete sequence Length = 199480 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 182384 gaatggggcagaggaaatgc 182365
>gb|AC161352.7| Mus musculus chromosome 3, clone RP23-129N8, complete sequence Length = 192165 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 39730 gaatggggcagaggaaatgc 39749
>gb|AC164531.9| Mus musculus chromosome 8, clone RP24-238M4, complete sequence Length = 163075 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 7683 gaatggggcagaggaaatgc 7702
>gb|AC140984.4| Mus musculus BAC clone RP23-129D21 from chromosome 3, complete sequence Length = 204109 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 146977 gaatggggcagaggaaatgc 146958
>gb|AC159008.2| Mus musculus BAC clone RP23-14E14 from chromosome 7, complete sequence Length = 239149 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 222262 gaatggggcagaggaaatgc 222281
>gb|AC158391.2| Mus musculus BAC clone RP23-441C8 from chromosome 17, complete sequence Length = 203548 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 18271 gaatggggcagaggaaatgc 18290
>gb|AC154400.2| Mus musculus BAC clone RP23-163P4 from chromosome 16, complete sequence Length = 180951 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 176591 gaatggggcagaggaaatgc 176610
>gb|AC168116.3| Mus musculus BAC clone RP24-108N24 from chromosome 1, complete sequence Length = 158847 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 97165 gaatggggcagaggaaatgc 97146
>gb|AC168218.1| Mus musculus BAC clone RP24-236K20 from chromosome 9, complete sequence Length = 168791 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 60718 gaatggggcagaggaaatgc 60737
>gb|AC101802.9| Mus musculus chromosome 1, clone RP24-221A4, complete sequence Length = 166975 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 aagaatggggcagaggaaat 341 |||||||||||||||||||| Sbjct: 123218 aagaatggggcagaggaaat 123237
>gb|AF003385.2| Caenorhabditis elegans cosmid R08F11, complete sequence Length = 32838 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 20 ttattcacattttgattttctttt 43 ||||||||||||||||||| |||| Sbjct: 23813 ttattcacattttgattttttttt 23836
>gb|AC102686.7| Mus musculus chromosome 1, clone RP24-467J24, complete sequence Length = 156547 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 76607 gaatggggcagaggaaatgc 76626
>gb|AC133457.6| Mus musculus chromosome 3, clone RP24-493E2, complete sequence Length = 169824 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 138282 gaatggggcagaggaaatgc 138301
>gb|AC119865.12| Mus musculus chromosome 6, clone RP23-390N11, complete sequence Length = 202454 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 156202 gaatggggcagaggaaatgc 156221
>gb|AC140315.3| Mus musculus BAC clone RP23-396I19 from chromosome 3, complete sequence Length = 205029 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 cttcgtctccctggctgccc 410 |||||||||||||||||||| Sbjct: 25682 cttcgtctccctggctgccc 25701
>gb|AC131690.3| Mus musculus BAC clone RP23-386P10 from chromosome 10, complete sequence Length = 208306 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 83392 gaatggggcagaggaaatgc 83373
>gb|AC107763.25| Mus musculus chromosome 5, clone RP23-180F3, complete sequence Length = 219488 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 125828 gaatggggcagaggaaatgc 125847
>ref|NM_006243.2| Homo sapiens protein phosphatase 2, regulatory subunit B (B56), alpha isoform (PPP2R5A), mRNA Length = 3145 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 400 cctggctgccctggctgcga 419 |||||||||||||||||||| Sbjct: 725 cctggctgccctggctgcga 706
>gb|AC121531.10| Mus musculus chromosome 1, clone RP24-459N9, complete sequence Length = 172704 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 122096 gaatggggcagaggaaatgc 122115
>gb|AC023285.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-333I11, complete sequence Length = 192255 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 100669 gaatggggcagaggaaatgc 100650
>gb|AC121301.8| Mus musculus chromosome 7, clone RP23-432H1, complete sequence Length = 205639 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 147126 gaatggggcagaggaaatgc 147107 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 140710 gaatggggcagaggaaatgc 140729
>gb|AC161176.5| Mus musculus chromosome 5, clone RP24-295A5, complete sequence Length = 157001 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 20945 gaatggggcagaggaaatgc 20964
>gb|AC102008.9| Mus musculus chromosome 7, clone RP24-502L8, complete sequence Length = 194538 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 160348 gaatggggcagaggaaatgc 160367
>gb|AC139884.8| Mus musculus chromosome 6, clone RP23-343E20, complete sequence Length = 227769 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 212850 gaatggggcagaggaaatgc 212869
>gb|BC022474.1| Homo sapiens protein phosphatase 2, regulatory subunit B (B56), alpha isoform, mRNA (cDNA clone MGC:26270 IMAGE:4815091), complete cds Length = 2717 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 400 cctggctgccctggctgcga 419 |||||||||||||||||||| Sbjct: 311 cctggctgccctggctgcga 292
>gb|AC165366.2| Mus musculus BAC clone RP23-51H15 from chromosome 13, complete sequence Length = 241514 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 175069 gaatggggcagaggaaatgc 175088
>gb|AC163395.6| Mus musculus chromosome 7, clone RP24-251J14, complete sequence Length = 151667 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 65421 gaatggggcagaggaaatgc 65440
>gb|AC139213.11| Mus musculus chromosome 7, clone RP23-341H2, complete sequence Length = 189709 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 10941 gaatggggcagaggaaatgc 10960
>gb|AC092482.71| Mus musculus strain C57BL/6J clone rp23-60j11, complete sequence Length = 220334 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 81944 gaatggggcagaggaaatgc 81925
>gb|AC113110.17| Mus musculus chromosome 16, clone RP23-328A9, complete sequence Length = 240173 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 195874 gaatggggcagaggaaatgc 195855
>gb|AC102693.9| Mus musculus chromosome 6, clone RP24-127M20, complete sequence Length = 191955 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 93438 gaatggggcagaggaaatgc 93419
>emb|CT009607.7| Mouse DNA sequence from clone RP23-134I10 on chromosome 17, complete sequence Length = 195995 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 15160 gaatggggcagaggaaatgc 15141
>gb|AY363103.1|AY363102S2 Mus musculus diadenosine triphosphate hydrolase (Fhit) gene, exons 6 through 10 and partial cds Length = 688489 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 510884 gaatggggcagaggaaatgc 510903
>gb|AC125123.4| Mus musculus BAC clone RP24-270C10 from chromosome 3, complete sequence Length = 121877 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 41607 gaatggggcagaggaaatgc 41588
>gb|AC131771.2| Mus musculus BAC clone RP24-297P10 from chromosome 10, complete sequence Length = 145678 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 68864 gaatggggcagaggaaatgc 68883
>gb|AC125381.4| Mus musculus BAC clone RP23-250N10 from chromosome 19, complete sequence Length = 155214 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 134349 gaatggggcagaggaaatgc 134330
>gb|AC132437.3| Mus musculus BAC clone RP23-230M17 from chromosome 5, complete sequence Length = 176825 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 171832 gaatggggcagaggaaatgc 171851
>gb|AC116319.4| Mus musculus BAC clone RP23-265J2 from chromosome 14, complete sequence Length = 170494 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 80829 gaatggggcagaggaaatgc 80810
>gb|AC083964.3| Homo sapiens chromosome 8, clone RP11-91J19, complete sequence Length = 161160 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 attttgattttcttttgagg 47 |||||||||||||||||||| Sbjct: 76160 attttgattttcttttgagg 76179
>gb|AC125402.3| Mus musculus BAC clone RP24-539G2 from chromosome 5, complete sequence Length = 163773 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 131558 gaatggggcagaggaaatgc 131577
>gb|AC124486.4| Mus musculus BAC clone RP23-451E1 from chromosome 12, complete sequence Length = 183140 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 164883 gaatggggcagaggaaatgc 164902
>gb|AC121571.4| Mus musculus BAC clone RP23-231J6 from 3, complete sequence Length = 195006 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 178797 gaatggggcagaggaaatgc 178816
>gb|AC117197.3| Mus musculus BAC clone RP23-127A21 from 16, complete sequence Length = 211410 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 174100 gaatggggcagaggaaatgc 174081
>gb|AC129333.4| Mus musculus BAC clone RP23-104F23 from 6, complete sequence Length = 216849 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 5430 gaatggggcagaggaaatgc 5449
>gb|AC123957.4| Mus musculus BAC clone RP23-302N2 from 12, complete sequence Length = 206661 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 9641 gaatggggcagaggaaatgc 9660
>gb|AC104914.9| Mus musculus chromosome 9, clone RP23-108E20, complete sequence Length = 260181 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 123505 gaatggggcagaggaaatgc 123524
>gb|AC122868.2| Mus musculus BAC clone RP23-148H17 from 6, complete sequence Length = 202374 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 9183 gaatggggcagaggaaatgc 9202
>gb|AC122009.2| Mus musculus BAC clone RP24-347B22 from 3, complete sequence Length = 152054 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 cttcgtctccctggctgccc 410 |||||||||||||||||||| Sbjct: 16054 cttcgtctccctggctgccc 16035
>gb|AC098725.3| Mus musculus BAC clone RP23-3D20 from 3, complete sequence Length = 234471 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 218673 gaatggggcagaggaaatgc 218692
>ref|XM_720781.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY00634) partial mRNA Length = 15929 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 cacattttgattttcttttg 44 |||||||||||||||||||| Sbjct: 15590 cacattttgattttcttttg 15571
>emb|CR699232.1|CNS0G2H8 Tetraodon nigroviridis full-length cDNA Length = 1011 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 gaagaatggggcagaggaaa 340 |||||||||||||||||||| Sbjct: 702 gaagaatggggcagaggaaa 683
>emb|CR688756.2|CNS0FUE8 Tetraodon nigroviridis full-length cDNA Length = 1004 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 gaagaatggggcagaggaaa 340 |||||||||||||||||||| Sbjct: 694 gaagaatggggcagaggaaa 675
>ref|XM_740000.1| Plasmodium chabaudi chabaudi ubiquitin-like protein (PC001268.02.0) partial mRNA Length = 2454 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 20 ttattcacattttgattttctttt 43 ||||||||||||| |||||||||| Sbjct: 797 ttattcacattttcattttctttt 774
>gb|AC101677.8| Mus musculus chromosome 10, clone RP23-138N1, complete sequence Length = 206087 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 119319 gaatggggcagaggaaatgc 119338
>gb|AC091523.23| Mus musculus strain C57BL/6J clone rp23-77a8 map 1, complete sequence Length = 235509 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 130543 gaatggggcagaggaaatgc 130562
>gb|AC157609.6| Mus musculus chromosome 8, clone RP23-94H5, complete sequence Length = 239452 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 190760 gaatggggcagaggaaatgc 190779
>gb|AC118543.30| Mus musculus strain C57BL/6J clone rp23-254b17 map 17, complete sequence Length = 241570 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 31473 gaatggggcagaggaaatgc 31492
>gb|AC163109.5| Mus musculus 6 BAC RP23-172E18 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 199216 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 154660 gaatggggcagaggaaatgc 154679
>emb|AL669831.13| Human DNA sequence from clone RP11-206L10 on chromosome 1 Contains thirteen novel genes, a novel pseudogene, a novel gene similar to the F-box only protein 25 gene(FBXO25), a novel pseudogene similar to the beta-tubulin family and a CpG island, complete sequence Length = 179567 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 attttgattttcttttgagg 47 |||||||||||||||||||| Sbjct: 103645 attttgattttcttttgagg 103626
>gb|BC110883.1| Homo sapiens protein phosphatase 2, regulatory subunit B (B56), alpha isoform, mRNA (cDNA clone MGC:131915 IMAGE:6045358), complete cds Length = 2868 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 400 cctggctgccctggctgcga 419 |||||||||||||||||||| Sbjct: 434 cctggctgccctggctgcga 415
>emb|AL360091.28| Human DNA sequence from clone RP11-384C4 on chromosome 1 Contains the 3' end of the PPP2R5A gene for protein phosphatase 2 regulatory subunit B (B56) alpha isoform, a ribosomal protein L23a (RPL23A) pseudogene, the 3' end of a novel gene (FLJ10874), two novel genes and three CpG islands, complete sequence Length = 99183 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 400 cctggctgccctggctgcga 419 |||||||||||||||||||| Sbjct: 2121 cctggctgccctggctgcga 2102
>gb|BT009224.1| Triticum aestivum clone wle1n.pk0076.h7:fis, full insert mRNA sequence Length = 1874 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 ccgggcgcccccgcggccgc 363 |||||||||||||||||||| Sbjct: 125 ccgggcgcccccgcggccgc 144
>gb|AC161410.3| Mus musculus chromosome 8, clone RP23-399J5, complete sequence Length = 196119 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 146644 gaatggggcagaggaaatgc 146625
>gb|AC165282.2| Mus musculus BAC clone RP24-465P22 from chromosome 16, complete sequence Length = 185134 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 114263 gaatggggcagaggaaatgc 114244
>gb|AC159305.3| Mus musculus BAC clone RP23-205D10 from chromosome 6, complete sequence Length = 209064 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 201217 gaatggggcagaggaaatgc 201198
>gb|AC164311.4| Mus musculus BAC clone RP23-144H18 from chromosome 8, complete sequence Length = 190693 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 55371 gaatggggcagaggaaatgc 55390
>emb|BX005086.9| Mouse DNA sequence from clone RP23-149N22 on chromosome 11 Contains a novel pseudogene, a sperm specific antigen 1 (Ssfa1), a glycoprotein 38 (Gp38) pseudogene and a CpG island, complete sequence Length = 192406 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 47766 gaatggggcagaggaaatgc 47747
>emb|AL669968.10| Mouse DNA sequence from clone RP23-475F22 on chromosome 11 Contains a glyceraldehyde-3-phosphate dehydrogenase (Gapd) pseudogene, complete sequence Length = 167170 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 77490 gaatggggcagaggaaatgc 77509
>emb|AL669825.10| Mouse DNA sequence from clone RP23-327K3 on chromosome 11 Contains a cyclic AMP phosphoprotein (Arpp19) pseudogene, a heat shock protein (Hsp) pseudogene and a ribosomal protein S6 (Rps6) pseudogene, complete sequence Length = 199649 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 6083 gaatggggcagaggaaatgc 6102
>gb|AC040904.4| Homo sapiens chromosome 17, clone RP11-619I22, complete sequence Length = 173651 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 acattttgattttcttttga 45 |||||||||||||||||||| Sbjct: 8772 acattttgattttcttttga 8791
>emb|AL845333.3| Mouse DNA sequence from clone RP23-245E19 on chromosome 4 Contains part of the Ptprd gene for receptor type protein tyrosine phosphatase D, complete sequence Length = 186256 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 144720 gaatggggcagaggaaatgc 144701
>emb|AL845317.7| Mouse DNA sequence from clone RP23-222K9 on chromosome 4 Contains a ribosomal protein L7 (Rpl7) pseudogene, the gene for a novel protein similar to stathmin 1 Stmn1 and a eukaryotic translation initiation factor 3 subunit 8 (Eif3s8) pseudogene, complete sequence Length = 181889 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 164368 gaatggggcagaggaaatgc 164349
>gb|AC157588.8| Mus musculus BAC clone RP24-95J4 from chromosome 5, complete sequence Length = 220137 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 77389 gaatggggcagaggaaatgc 77408
>gb|AC183093.2| Mus musculus BAC clone RP24-107H20 from chromosome 17, complete sequence Length = 181403 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 11717 gaatggggcagaggaaatgc 11736
>gb|AC011939.9| Homo sapiens chromosome 15, clone RP11-16E23, complete sequence Length = 162964 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 attcacattttgattttcttttga 45 ||||||||||| |||||||||||| Sbjct: 141807 attcacattttaattttcttttga 141784
>gb|AC091271.8| Homo sapiens chromosome 17, clone RP11-758H9, complete sequence Length = 135784 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 acattttgattttcttttga 45 |||||||||||||||||||| Sbjct: 65308 acattttgattttcttttga 65289
>gb|AC004481.3| Arabidopsis thaliana chromosome 2 clone F13P17 map ve016, complete sequence Length = 112763 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 122 atatcatctgatcatcatgtgtttttgg 149 ||||||||||||||| | |||||||||| Sbjct: 85523 atatcatctgatcatgaagtgtttttgg 85550
>gb|AC004077.3| Arabidopsis thaliana chromosome 2 clone T31E10 map ve016, complete sequence Length = 93060 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 122 atatcatctgatcatcatgtgtttttgg 149 ||||||||||||||| | |||||||||| Sbjct: 88679 atatcatctgatcatgaagtgtttttgg 88652
>dbj|AK139719.1| Mus musculus 2 cells egg cDNA, RIKEN full-length enriched library, clone:B020013H04 product:tubby like protein 4, full insert sequence Length = 2020 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 1937 gaatggggcagaggaaatgc 1918
>dbj|AK134664.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length enriched library, clone:6330520A03 product:unclassifiable, full insert sequence Length = 1137 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 1054 gaatggggcagaggaaatgc 1035
>gb|AF324825.1|AF324825 Mus musculus LY55D (Ly55d) gene, complete cds Length = 35128 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 22274 gaatggggcagaggaaatgc 22255
>gb|DQ360291.1| Mus musculus strain SJL/J C-X3-C chemokine receptor 1 (Cx3cr1), C-C motif chemokine receptor 8 (Ccr8), ribosomal protein SA (Rpsa), and myelin-associated oligodendrocytic basic protein (Mobp) genes, complete cds Length = 144780 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 75906 gaatggggcagaggaaatgc 75887
>gb|S43869.1| MUP1.5a {5' region, DNase I-hypersensitive site} [mice, submaxillary gland, mRNA Partial, 1609 nt] Length = 1609 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 485 gaatggggcagaggaaatgc 466
>gb|AC154338.2| Mus musculus BAC clone RP23-247M16 from chromosome 17, complete sequence Length = 190285 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 104531 gaatggggcagaggaaatgc 104512
>gb|AC157661.2| Mus musculus BAC clone RP23-233F23 from chromosome 3, complete sequence Length = 195603 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 189461 gaatggggcagaggaaatgc 189480
>gb|AC153138.3| Mus musculus BAC clone RP23-442K7 from chromosome 7, complete sequence Length = 206648 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 186478 gaatggggcagaggaaatgc 186497
>gb|AC159306.2| Mus musculus BAC clone RP23-206B2 from chromosome 14, complete sequence Length = 194660 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 13712 gaatggggcagaggaaatgc 13731
>gb|AC154473.2| Mus musculus BAC clone RP24-120O11 from chromosome 16, complete sequence Length = 190965 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 182444 gaatggggcagaggaaatgc 182463
>gb|AC154208.2| Mus musculus BAC clone RP24-377L12 from chromosome 16, complete sequence Length = 178006 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 47137 gaatggggcagaggaaatgc 47118
>gb|AC153576.3| Mus musculus 6 BAC RP23-330J17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 215953 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 95055 gaatggggcagaggaaatgc 95074
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 ttttgattttcttttgaggg 48 |||||||||||||||||||| Sbjct: 1017143 ttttgattttcttttgaggg 1017124
>gb|AC153641.3| Mus musculus 6 BAC RP23-5F24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 193417 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 52429 gaatggggcagaggaaatgc 52410
>gb|AC159136.7| Mus musculus 10 BAC RP23-58L22 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 207997 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 201481 gaatggggcagaggaaatgc 201462
>gb|AC154854.2| Mus musculus BAC clone RP23-23O4 from chromosome 16, complete sequence Length = 209970 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 191506 gaatggggcagaggaaatgc 191487
>gb|AC154536.2| Mus musculus BAC clone RP23-449K2 from chromosome 17, complete sequence Length = 178521 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 98089 gaatggggcagaggaaatgc 98070
>gb|AC132361.4| Mus musculus BAC clone RP24-149E13 from chromosome 1, complete sequence Length = 158837 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 144705 gaatggggcagaggaaatgc 144724
>gb|AC078931.9|AC078931 Mus musculus BAC RP23-419E4 (Roswell Park Cancer Institute Mouse BAC Library) complete sequence Length = 188750 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 158423 gaatggggcagaggaaatgc 158442 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 23187 gaatggggcagaggaaatgc 23168
>gb|AC138393.2| Homo sapiens chromosome 1 clone RP11-504P24, complete sequence Length = 184644 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 attttgattttcttttgagg 47 |||||||||||||||||||| Sbjct: 128737 attttgattttcttttgagg 128718
>ref|XM_216317.3| PREDICTED: Rattus norvegicus similar to RPE-spondin (LOC297757), mRNA Length = 1482 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 399 ccctggctgccctggctgcg 418 |||||||||||||||||||| Sbjct: 343 ccctggctgccctggctgcg 324
>gb|AC102448.15| Mus musculus chromosome 3, clone RP24-209L5, complete sequence Length = 159371 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 56769 gaatggggcagaggaaatgc 56788
>gb|AC140780.3| Mus musculus BAC clone RP24-500J16 from chromosome 5, complete sequence Length = 166260 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 122347 gaatggggcagaggaaatgc 122366
>emb|BX842238.2| Mouse DNA sequence from clone RP24-159M2 on chromosome 2, complete sequence Length = 86221 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 68855 gaatggggcagaggaaatgc 68836
>emb|AL773512.6| Mouse DNA sequence from clone RP23-454N6 on chromosome 2, complete sequence Length = 159731 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 120606 gaatggggcagaggaaatgc 120587
>gb|AC149294.8| Mus musculus chromosome 15, clone RP24-389G21, complete sequence Length = 136530 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 114112 gaatggggcagaggaaatgc 114131
>emb|AJ331743.1|HSA331743 Homo sapiens genomic sequence surrounding NotI site, clone NR5-GI11R Length = 736 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 ctcctgctcggcagccgcag 216 |||||||||||||||||||| Sbjct: 417 ctcctgctcggcagccgcag 398
>gb|AC154453.2| Mus musculus BAC clone RP24-173C8 from 9, complete sequence Length = 208235 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 80709 gaatggggcagaggaaatgc 80690
>gb|AC110091.4| Mus musculus BAC clone RP24-87K15 from 9, complete sequence Length = 222792 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 43609 gaatggggcagaggaaatgc 43590
>gb|AC152415.4| Mus musculus BAC clone RP23-359F16 from 10, complete sequence Length = 195249 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 187151 gaatggggcagaggaaatgc 187170
>gb|AC155075.10| Mus musculus chromosome 5, clone RP24-82B9, complete sequence Length = 236335 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 167678 gaatggggcagaggaaatgc 167697
>gb|AC153555.5| Mus musculus 10 BAC RP23-193J20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 208079 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 73735 gaatggggcagaggaaatgc 73716
>gb|AC124118.15| Mus musculus chromosome 3, clone RP23-152K14, complete sequence Length = 199667 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 75909 gaatggggcagaggaaatgc 75890
>gb|AC133936.5| Mus musculus BAC clone RP24-399H1 from chromosome 6, complete sequence Length = 177971 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 32101 gaatggggcagaggaaatgc 32120
>gb|AC125007.9| Mus musculus chromosome 3, clone RP24-190F20, complete sequence Length = 149805 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 129554 gaatggggcagaggaaatgc 129535
>gb|AC161367.4| Mus musculus BAC clone RP23-450F3 from chromosome 1, complete sequence Length = 188588 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 177197 gaatggggcagaggaaatgc 177216
>gb|AC092481.28| Mus musculus strain C57BL/6J chromosome 17 clone rp23-456p8, complete sequence Length = 195988 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 9076 gaatggggcagaggaaatgc 9095
>emb|AL837520.26| Mouse DNA sequence from clone RP23-412O4 on chromosome 2, complete sequence Length = 128625 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 125380 gaatggggcagaggaaatgc 125361
>emb|CT573043.10| Mouse DNA sequence from clone RP23-24G19 on chromosome 17, complete sequence Length = 93027 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 41134 gaatggggcagaggaaatgc 41115
>gb|AC162521.4| Mus musculus chromosome 7, clone RP23-356O13, complete sequence Length = 207307 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 113663 gaatggggcagaggaaatgc 113682
>dbj|AP001111.1| Oryza sativa genomic DNA, chromosome 5, clone:P0699E04 Length = 175439 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 ttttgattttcttttgaggg 48 |||||||||||||||||||| Sbjct: 107540 ttttgattttcttttgaggg 107521
>gb|AC116720.16| Mus musculus chromosome 3, clone RP23-223N19, complete sequence Length = 203748 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 399 ccctggctgccctggctgcg 418 |||||||||||||||||||| Sbjct: 93128 ccctggctgccctggctgcg 93109
>gb|AC170597.2| Mus musculus BAC clone RP23-391A19 from chromosome 13, complete sequence Length = 223662 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 156905 gaatggggcagaggaaatgc 156924
>gb|L42373.1|HUMPP2A Homo sapiens phosphatase 2A B56-alpha (PP2A) mRNA, complete cds Length = 3120 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 400 cctggctgccctggctgcga 419 |||||||||||||||||||| Sbjct: 722 cctggctgccctggctgcga 703
>gb|AC120846.16| Mus musculus chromosome 7, clone RP24-317L6, complete sequence Length = 192429 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 13261 gaatggggcagaggaaatgc 13242
>emb|CT030690.6| Mouse DNA sequence from clone RP23-65J10 on chromosome 16, complete sequence Length = 220861 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 1956 gaatggggcagaggaaatgc 1975
>emb|CT030651.6| Mouse DNA sequence from clone RP23-229N10 on chromosome 9, complete sequence Length = 128191 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 111853 gaatggggcagaggaaatgc 111872
>gb|AC140327.3| Mus musculus BAC clone RP24-325P20 from 6, complete sequence Length = 154692 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 121353 gaatggggcagaggaaatgc 121372
>gb|AC151272.2| Mus musculus BAC clone RP24-208G22 from 17, complete sequence Length = 148109 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 5529 gaatggggcagaggaaatgc 5548
>emb|CT025538.13| Mouse DNA sequence from clone RP23-386E7 on chromosome 14, complete sequence Length = 206957 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 75334 gaatggggcagaggaaatgc 75315
>gb|AC147994.4| Mus musculus BAC clone RP24-338F2 from 6, complete sequence Length = 215213 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 32329 gaatggggcagaggaaatgc 32348
>gb|AC151720.2| Mus musculus BAC clone RP23-44P12 from 7, complete sequence Length = 233007 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 169056 gaatggggcagaggaaatgc 169037
>gb|AC154349.1| Mus musculus BAC clone RP23-222O19 from 17, complete sequence Length = 211677 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 45417 gaatggggcagaggaaatgc 45398
>gb|AC150747.2| Mus musculus BAC clone RP23-249E15 from 5, complete sequence Length = 209364 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 205147 gaatggggcagaggaaatgc 205128
>gb|AC140318.4| Mus musculus BAC clone RP23-400F19 from 9, complete sequence Length = 180211 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 90289 gaatggggcagaggaaatgc 90308
>gb|AC140330.3| Mus musculus BAC clone RP23-410I24 from 6, complete sequence Length = 185681 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 40611 gaatggggcagaggaaatgc 40592
>emb|CT030713.5| Mouse DNA sequence from clone RP24-94C21 on chromosome 17, complete sequence Length = 190764 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 105422 gaatggggcagaggaaatgc 105403
>emb|AL929424.7| Mouse DNA sequence from clone RP23-24F19 on chromosome 2, complete sequence Length = 204020 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 91814 gaatggggcagaggaaatgc 91833
>gb|AC000386.1|AC000386 Human Chromosome 15 pac pDJ378j17, complete sequence Length = 60023 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 attttgattttcttttgagg 47 |||||||||||||||||||| Sbjct: 55862 attttgattttcttttgagg 55881
>gb|AC150903.2| Mus musculus BAC clone RP23-35B12 from chromosome 7, complete sequence Length = 217178 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 117487 gaatggggcagaggaaatgc 117468
>gb|AC171404.5| Mus musculus chromosome 7, clone RP24-235N21, complete sequence Length = 146054 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 141670 gaatggggcagaggaaatgc 141689
>gb|AC162921.3| Mus musculus BAC clone RP23-342H1 from chromosome 9, complete sequence Length = 254666 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 33031 gaatggggcagaggaaatgc 33012
>emb|AL591606.4| Mouse DNA sequence from clone RP23-272O14 on chromosome 2, complete sequence Length = 179373 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 17392 gaatggggcagaggaaatgc 17411
>gb|AC153730.2| Mus musculus 6 BAC RP24-539M22 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 151428 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 59685 gaatggggcagaggaaatgc 59704
>emb|AL772344.4| Mouse DNA sequence from clone RP23-235J15 on chromosome 4, complete sequence Length = 223771 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 118129 gaatggggcagaggaaatgc 118148
>emb|AL929320.7| Mouse DNA sequence from clone RP24-160E2 on chromosome 4, complete sequence Length = 115895 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 110611 gaatggggcagaggaaatgc 110630
>gb|AC158530.2| Mus musculus BAC clone RP23-255H12 from chromosome 17, complete sequence Length = 154287 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 63808 gaatggggcagaggaaatgc 63827
>emb|AL929054.5| Mouse DNA sequence from clone RP23-454A14 on chromosome 2, complete sequence Length = 198497 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 66805 gaatggggcagaggaaatgc 66786
>gb|AC154098.6| Mus musculus chromosome 3, clone RP23-196L9, complete sequence Length = 201332 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 184263 gaatggggcagaggaaatgc 184244
>emb|AL732588.6| Mouse DNA sequence from clone RP24-159M19 on chromosome 2, complete sequence Length = 91977 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 62887 gaatggggcagaggaaatgc 62868
>emb|AL591763.14| Mouse DNA sequence from clone RP23-480D17 on chromosome 2, complete sequence Length = 153847 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gaatggggcagaggaaatgc 343 |||||||||||||||||||| Sbjct: 91960 gaatggggcagaggaaatgc 91941 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,000,798 Number of Sequences: 3902068 Number of extensions: 4000798 Number of successful extensions: 95879 Number of sequences better than 10.0: 175 Number of HSP's better than 10.0 without gapping: 175 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 95368 Number of HSP's gapped (non-prelim): 511 length of query: 424 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 402 effective length of database: 17,147,199,772 effective search space: 6893174308344 effective search space used: 6893174308344 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)