>emb|AL034554.8|HS994L9 Human DNA sequence from clone RP5-994L9 on chromosome 20p12.3-13
             Contains STS and GSSs, complete sequence
          Length = 137739

 Score = 42.1 bits (21), Expect = 0.35
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 51    acatctttggcatgtctttcc 71
             |||||||||||||||||||||
Sbjct: 48566 acatctttggcatgtctttcc 48546

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 0.35
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 67      tttccatccaccttcttcgtt 87
               |||||||||||||||||||||
Sbjct: 9757635 tttccatccaccttcttcgtt 9757615

>dbj|AP005863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0040N23
          Length = 101061

 Score = 42.1 bits (21), Expect = 0.35
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 67    tttccatccaccttcttcgtt 87
             |||||||||||||||||||||
Sbjct: 30054 tttccatccaccttcttcgtt 30034

>gb|AF033096.1|AF033096 Avena sativa nonphototropic hypocotyl 1 (NPH1-1) mRNA, complete cds
          Length = 3467

 Score = 42.1 bits (21), Expect = 0.35
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 78   cttcttcgttcagaacatgtcggtg 102
            ||||||| |||||||||||||||||
Sbjct: 3184 cttcttcattcagaacatgtcggtg 3160

>gb|AC112143.5| Mus musculus BAC clone RP23-29E2 from chromosome 2, complete sequence
          Length = 205920

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 63     tgtctttccatccaccttct 82
              ||||||||||||||||||||
Sbjct: 153552 tgtctttccatccaccttct 153571

>emb|CR388403.8| Zebrafish DNA sequence from clone CH211-153C18 in linkage group 2,
             complete sequence
          Length = 159100

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 67    tttccatccaccttcttcgt 86
             ||||||||||||||||||||
Sbjct: 74413 tttccatccaccttcttcgt 74394

>gb|AC016888.23| Homo sapiens chromosome 17, clone RP11-452I5, complete sequence
          Length = 163597

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 66     ctttccatccaccttcttcgttca 89
              ||||||||||||||||||| ||||
Sbjct: 138198 ctttccatccaccttcttctttca 138221

>gb|AC068874.21| Homo sapiens chromosome 17, clone RP11-399J11, complete sequence
          Length = 174914

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 66     ctttccatccaccttcttcgttca 89
              ||||||||||||||||||| ||||
Sbjct: 165479 ctttccatccaccttcttctttca 165456

>emb|AL928537.12| Mouse DNA sequence from clone RP23-236E7 on chromosome 2, complete
            sequence
          Length = 190808

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 63   tgtctttccatccaccttct 82
            ||||||||||||||||||||
Sbjct: 4345 tgtctttccatccaccttct 4364

>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome
          Length = 5411809

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 64      gtctttccatccaccttctt 83
               ||||||||||||||||||||
Sbjct: 1407362 gtctttccatccaccttctt 1407343

>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome
          Length = 5237682

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 65      tctttccatccaccttctt 83
               |||||||||||||||||||
Sbjct: 1411240 tctttccatccaccttctt 1411222

>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome
          Length = 5227419

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 65      tctttccatccaccttctt 83
               |||||||||||||||||||
Sbjct: 1387951 tctttccatccaccttctt 1387933

>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome
          Length = 5228663

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 65      tctttccatccaccttctt 83
               |||||||||||||||||||
Sbjct: 1387897 tctttccatccaccttctt 1387879

>gb|AC112942.11| Mus musculus chromosome 7, clone RP23-449N21, complete sequence
          Length = 162570

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 57    ttggcatgtctttccatccacct 79
             ||||||| |||||||||||||||
Sbjct: 93934 ttggcatttctttccatccacct 93956

>ref|XM_762296.1| Giardia lamblia ATCC 50803 hypothetical protein
          (GLP_91_8176_7298) partial mRNA
          Length = 879

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 68 ttccatccaccttcttcgt 86
          |||||||||||||||||||
Sbjct: 87 ttccatccaccttcttcgt 69

>gb|CP000001.1| Bacillus cereus E33L, complete genome
          Length = 5300915

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 65      tctttccatccaccttctt 83
               |||||||||||||||||||
Sbjct: 1422635 tctttccatccaccttctt 1422617

>ref|XM_964699.1| PREDICTED: Tribolium castaneum similar to CG31772-PA (LOC658297),
            mRNA
          Length = 4785

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 98   cggtgccattatcggcggc 116
            |||||||||||||||||||
Sbjct: 4357 cggtgccattatcggcggc 4339

>emb|BX005225.20| Zebrafish DNA sequence from clone DKEY-34L15 in linkage group 14,
              complete sequence
          Length = 206042

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 6      ccaacaacacacgacccat 24
              |||||||||||||||||||
Sbjct: 126380 ccaacaacacacgacccat 126362

>gb|AC010885.8| Homo sapiens BAC clone RP11-368K23 from 2, complete sequence
          Length = 177385

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 54     tctttggcatgtctttcca 72
              |||||||||||||||||||
Sbjct: 159005 tctttggcatgtctttcca 159023

>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome
          Length = 5227293

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 65      tctttccatccaccttctt 83
               |||||||||||||||||||
Sbjct: 1387828 tctttccatccaccttctt 1387810

>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome
          Length = 5224283

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 65      tctttccatccaccttctt 83
               |||||||||||||||||||
Sbjct: 1543142 tctttccatccaccttctt 1543124

>gb|AF033097.1|AF033097 Avena sativa nonphototropic hypocotyl 1 (NPH1-2) mRNA, complete cds
          Length = 3422

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 28/31 (90%)
 Strand = Plus / Minus

                                           
Query: 86   ttcagaacatgtcggtgccattatcggcggc 116
            |||||||||||||||||  |||||| |||||
Sbjct: 3116 ttcagaacatgtcggtgtgattatcagcggc 3086


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 763,578
Number of Sequences: 3902068
Number of extensions: 763578
Number of successful extensions: 49676
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 49542
Number of HSP's gapped (non-prelim): 134
length of query: 118
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 97
effective length of database: 17,151,101,840
effective search space: 1663656878480
effective search space used: 1663656878480
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)