ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl22a04 |
|---|---|
| Clone Library Name | barley_pub |
>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 113 bits (282), Expect = 3e-25 Identities = 55/72 (76%), Positives = 59/72 (81%) Frame = -1 Query: 477 TSDAKALEAFKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEG 298 TSD KALE FKRF +L IE +VV MN DP+LKNR GPAKFPYMLLYPNTSDH G A G Sbjct: 791 TSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAAG 850 Query: 297 LTARGIPNSISI 262 LTA+GIPNSISI Sbjct: 851 LTAKGIPNSISI 862
>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)| Length = 870 Score = 110 bits (275), Expect = 2e-24 Identities = 55/72 (76%), Positives = 58/72 (80%) Frame = -1 Query: 477 TSDAKALEAFKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEG 298 TSDAKALEAFKRFGA+L IE +VVAMN DP KNR GP FPY LLYPNTSD G A G Sbjct: 799 TSDAKALEAFKRFGARLTEIESRVVAMNKDPHRKNRVGPTNFPYTLLYPNTSDLKGDAAG 858 Query: 297 LTARGIPNSISI 262 L+ARGIPNSISI Sbjct: 859 LSARGIPNSISI 870
>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)| Length = 863 Score = 105 bits (261), Expect = 8e-23 Identities = 51/72 (70%), Positives = 58/72 (80%) Frame = -1 Query: 477 TSDAKALEAFKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEG 298 TSD KALEAFKRF +L IE +V+ MN DP LKNR GPA FPY L++PNTSD+ G AEG Sbjct: 792 TSDPKALEAFKRFSRQLVEIESKVLNMNKDPLLKNRVGPANFPYTLMFPNTSDNKGAAEG 851 Query: 297 LTARGIPNSISI 262 +TARGIPNSISI Sbjct: 852 ITARGIPNSISI 863
>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)| Length = 866 Score = 105 bits (261), Expect = 8e-23 Identities = 52/72 (72%), Positives = 59/72 (81%) Frame = -1 Query: 477 TSDAKALEAFKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEG 298 TSDA+ALEAF+RF +L IE +VV MN D LKNR GPA+FPYMLLYPNTSD TG A G Sbjct: 795 TSDARALEAFRRFSDRLVEIEGKVVGMNGDAGLKNRNGPAEFPYMLLYPNTSDVTGAAAG 854 Query: 297 LTARGIPNSISI 262 +TA+GIPNSISI Sbjct: 855 ITAKGIPNSISI 866
>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)| Length = 877 Score = 96.3 bits (238), Expect = 4e-20 Identities = 49/73 (67%), Positives = 57/73 (78%), Gaps = 1/73 (1%) Frame = -1 Query: 477 TSDAKALEAFKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQ-AE 301 TSDAKAL+AFKRFG++L IE ++ MN + LKNR GP K PYMLLYPNTSD T + + Sbjct: 805 TSDAKALDAFKRFGSRLVDIENRIKDMNGNSALKNRNGPVKMPYMLLYPNTSDVTKEKGQ 864 Query: 300 GLTARGIPNSISI 262 GLTA GIPNSISI Sbjct: 865 GLTAMGIPNSISI 877
>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)| Length = 864 Score = 87.4 bits (215), Expect = 2e-17 Identities = 45/72 (62%), Positives = 52/72 (72%) Frame = -1 Query: 477 TSDAKALEAFKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEG 298 T+D KALEAFKRFG+KL GIE ++ A NSDP L+NRTGP + PY LL H EG Sbjct: 799 TTDKKALEAFKRFGSKLTGIEGKINARNSDPSLRNRTGPVQLPYTLL------HRSSEEG 852 Query: 297 LTARGIPNSISI 262 LT +GIPNSISI Sbjct: 853 LTFKGIPNSISI 864
>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)| Length = 853 Score = 87.0 bits (214), Expect = 2e-17 Identities = 46/72 (63%), Positives = 52/72 (72%) Frame = -1 Query: 477 TSDAKALEAFKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEG 298 TSDA LEAFKRFG KLE IEK+++ N D L+NR GPAK PY LLYP++ EG Sbjct: 788 TSDAGPLEAFKRFGKKLEEIEKKLIEKNKDETLRNRYGPAKMPYTLLYPSSE------EG 841 Query: 297 LTARGIPNSISI 262 LT RGIPNSISI Sbjct: 842 LTFRGIPNSISI 853
>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)| Length = 861 Score = 81.6 bits (200), Expect = 9e-16 Identities = 42/72 (58%), Positives = 52/72 (72%) Frame = -1 Query: 477 TSDAKALEAFKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEG 298 TSD +ALEAFK+FG KL IEK++ N+D +L+NR GP + PY LLYP++ EG Sbjct: 796 TSDKRALEAFKKFGNKLAEIEKKLTQRNNDEKLRNRHGPVEMPYTLLYPSSK------EG 849 Query: 297 LTARGIPNSISI 262 LT RGIPNSISI Sbjct: 850 LTFRGIPNSISI 861
>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)| Length = 865 Score = 79.7 bits (195), Expect = 4e-15 Identities = 40/72 (55%), Positives = 52/72 (72%) Frame = -1 Query: 477 TSDAKALEAFKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEG 298 TSD+KAL+AF++FG KL+ IE+++ N+D L NR GP + PY LL+PN +EG Sbjct: 801 TSDSKALQAFQKFGNKLKEIEEKLARKNNDQSLSNRLGPVQLPYTLLHPN-------SEG 853 Query: 297 LTARGIPNSISI 262 LT RGIPNSISI Sbjct: 854 LTCRGIPNSISI 865
>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 79.7 bits (195), Expect = 4e-15 Identities = 40/72 (55%), Positives = 50/72 (69%) Frame = -1 Query: 477 TSDAKALEAFKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEG 298 T++ KAL+AFKRFG KL+ IE++++ N D L+NR GP K PY +L P D EG Sbjct: 796 TNNIKALQAFKRFGQKLKEIEEKIMGRNKDSSLRNRNGPVKMPYTVLLPTCED-----EG 850 Query: 297 LTARGIPNSISI 262 LT RGIPNSISI Sbjct: 851 LTFRGIPNSISI 862
>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)| Length = 839 Score = 79.7 bits (195), Expect = 4e-15 Identities = 42/73 (57%), Positives = 55/73 (75%), Gaps = 1/73 (1%) Frame = -1 Query: 477 TSDAKALEAFKRFGAKLEGIEKQVVAMNSDPQLK-NRTGPAKFPYMLLYPNTSDHTGQAE 301 TSD+KAL+AF++FG KL+ IE+++V N+DP L+ NR GP + PY LLYP++ E Sbjct: 773 TSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSE------E 826 Query: 300 GLTARGIPNSISI 262 GLT RGIPNSISI Sbjct: 827 GLTFRGIPNSISI 839
>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)| Length = 857 Score = 77.8 bits (190), Expect = 1e-14 Identities = 41/72 (56%), Positives = 50/72 (69%) Frame = -1 Query: 477 TSDAKALEAFKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEG 298 TSD +ALEAFKRFG KL IE ++ N+D +L+NR GP + PY LL P++ EG Sbjct: 792 TSDTRALEAFKRFGNKLAQIENKLSERNNDEKLRNRCGPVQMPYTLLLPSSK------EG 845 Query: 297 LTARGIPNSISI 262 LT RGIPNSISI Sbjct: 846 LTFRGIPNSISI 857
>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)| Length = 866 Score = 77.4 bits (189), Expect = 2e-14 Identities = 40/72 (55%), Positives = 49/72 (68%) Frame = -1 Query: 477 TSDAKALEAFKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEG 298 T+D+ EAFKRFG KL IE+++ N+D L+NR GP K PY LLYP++ EG Sbjct: 801 TTDSVPKEAFKRFGKKLAEIEEKLTQRNNDESLRNRYGPVKMPYTLLYPSSE------EG 854 Query: 297 LTARGIPNSISI 262 LT RGIPNSISI Sbjct: 855 LTCRGIPNSISI 866
>LOXB_PHAVU (P27481) Lipoxygenase (EC 1.13.11.12) (Fragment)| Length = 741 Score = 77.0 bits (188), Expect = 2e-14 Identities = 41/66 (62%), Positives = 47/66 (71%) Frame = -1 Query: 477 TSDAKALEAFKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEG 298 TSDA LEAFKRFG KL IEK++V N+D L+NRTGPAK PY LLYP++ EG Sbjct: 682 TSDAGPLEAFKRFGKKLAEIEKKLVQKNNDETLRNRTGPAKMPYTLLYPSSE------EG 735 Query: 297 LTARGI 280 LT RGI Sbjct: 736 LTFRGI 741
>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)| Length = 864 Score = 76.3 bits (186), Expect = 4e-14 Identities = 39/72 (54%), Positives = 51/72 (70%) Frame = -1 Query: 477 TSDAKALEAFKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEG 298 TSD+KAL+AF++FG KL IE ++ N+DP L +R GP + PY LL+P++ EG Sbjct: 799 TSDSKALQAFQKFGNKLAEIEAKLTNKNNDPSLYHRVGPVQLPYTLLHPSSK------EG 852 Query: 297 LTARGIPNSISI 262 LT RGIPNSISI Sbjct: 853 LTFRGIPNSISI 864
>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)| Length = 859 Score = 70.1 bits (170), Expect = 3e-12 Identities = 35/71 (49%), Positives = 48/71 (67%) Frame = -1 Query: 474 SDAKALEAFKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGL 295 ++ +ALEAF++FG K++ IEK + N D LKNRTG K PY LL+P++ G+ Sbjct: 795 AEKEALEAFEKFGEKVKEIEKNIDERNDDETLKNRTGLVKMPYTLLFPSSEG------GV 848 Query: 294 TARGIPNSISI 262 T RGIPNS+SI Sbjct: 849 TGRGIPNSVSI 859
>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)| Length = 861 Score = 70.1 bits (170), Expect = 3e-12 Identities = 36/72 (50%), Positives = 44/72 (61%) Frame = -1 Query: 477 TSDAKALEAFKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEG 298 T D + L AF RFG KL IEKQ++ N D L NR+GP PY LL+P + G Sbjct: 796 TKDKEPLAAFDRFGKKLTDIEKQIIQRNGDNILTNRSGPVNAPYTLLFPTSEG------G 849 Query: 297 LTARGIPNSISI 262 LT +GIPNS+SI Sbjct: 850 LTGKGIPNSVSI 861
>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)| Length = 859 Score = 69.7 bits (169), Expect = 4e-12 Identities = 35/72 (48%), Positives = 45/72 (62%) Frame = -1 Query: 477 TSDAKALEAFKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEG 298 T D + L AF+RFG L IE +++ MNS KNR+GP PY LL+P + EG Sbjct: 794 TKDKEPLVAFERFGKMLSDIENRIMIMNSHKSWKNRSGPVNVPYTLLFPTSE------EG 847 Query: 297 LTARGIPNSISI 262 LT +GIPNS+SI Sbjct: 848 LTGKGIPNSVSI 859
>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)| Length = 860 Score = 69.3 bits (168), Expect = 5e-12 Identities = 36/72 (50%), Positives = 45/72 (62%) Frame = -1 Query: 477 TSDAKALEAFKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEG 298 T D + L AF+RFG KL IEKQ++ N + L NRTGP PY LL+P + G Sbjct: 795 TKDKEPLAAFERFGNKLTDIEKQIMQRNGNNILTNRTGPVNAPYTLLFPTSEG------G 848 Query: 297 LTARGIPNSISI 262 LT +GIPNS+SI Sbjct: 849 LTGKGIPNSVSI 860
>LOX5_ORYSA (Q7XV13) Putative lipoxygenase 5 (EC 1.13.11.12)| Length = 899 Score = 53.5 bits (127), Expect = 3e-07 Identities = 26/72 (36%), Positives = 41/72 (56%) Frame = -1 Query: 477 TSDAKALEAFKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEG 298 T+D AL A + F A + E+++ N+DP +NR G PY L+ P++ G Sbjct: 834 TADPAALAAAREFAADVRRAEEEIERRNADPSRRNRCGAGVLPYELMAPSS------GPG 887 Query: 297 LTARGIPNSISI 262 +T RG+PNS++I Sbjct: 888 ITCRGVPNSVTI 899
>LOXC1_ORYSA (P38419) Lipoxygenase 7, chloroplast precursor (EC 1.13.11.12)| Length = 924 Score = 49.3 bits (116), Expect = 5e-06 Identities = 29/71 (40%), Positives = 37/71 (52%) Frame = -1 Query: 474 SDAKALEAFKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGL 295 SDA A+ F A+L+ IE + N D +LKNR G PY L+ P + G+ Sbjct: 860 SDAAVQAAYDGFAARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKPFSD------SGV 913 Query: 294 TARGIPNSISI 262 T GIPNS SI Sbjct: 914 TGMGIPNSTSI 924
>LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC 1.13.11.12)| (LOX-100) (LOX2:Hv:1) Length = 936 Score = 48.9 bits (115), Expect = 7e-06 Identities = 30/76 (39%), Positives = 38/76 (50%), Gaps = 4/76 (5%) Frame = -1 Query: 477 TSDAKALEAFKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTG---- 310 T D +AF+ F I +QV N+DP KNR G PY+LL P+ D T Sbjct: 861 TKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDGDPT 920 Query: 309 QAEGLTARGIPNSISI 262 + + GIPNSISI Sbjct: 921 DEKMVMEMGIPNSISI 936
>LOX23_HORVU (Q8GSM2) Lipoxygenase 2.3, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:3) Length = 896 Score = 48.5 bits (114), Expect = 9e-06 Identities = 27/64 (42%), Positives = 37/64 (57%) Frame = -1 Query: 453 AFKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPN 274 AF++F +L+ E + N++P+ KNR G PY LL P + G+T RGIPN Sbjct: 839 AFEKFSGRLKEAEGTIDMRNNNPENKNRCGAGIVPYELLKPFSE------PGVTGRGIPN 892 Query: 273 SISI 262 SISI Sbjct: 893 SISI 896
>LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12)| Length = 918 Score = 48.1 bits (113), Expect = 1e-05 Identities = 28/72 (38%), Positives = 38/72 (52%) Frame = -1 Query: 477 TSDAKALEAFKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEG 298 T+D A+ A F A + E+ + N+D KNR G PY LL P++ G Sbjct: 853 TADEAAVAAHGMFAADVRRAEETIERRNADHGRKNRCGAGVLPYELLAPSS------PPG 906 Query: 297 LTARGIPNSISI 262 +T RG+PNSISI Sbjct: 907 VTCRGVPNSISI 918
>LOXC2_ORYSA (Q84YK8) Probable lipoxygenase 8, chloroplast precursor (EC| 1.13.11.12) Length = 941 Score = 48.1 bits (113), Expect = 1e-05 Identities = 29/71 (40%), Positives = 37/71 (52%) Frame = -1 Query: 474 SDAKALEAFKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGL 295 SDA A+ F A+L+ IE + N D +LKNR G PY L+ P + G+ Sbjct: 877 SDAAVQAAYAGFTARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKPFSD------AGV 930 Query: 294 TARGIPNSISI 262 T GIPNS SI Sbjct: 931 TGMGIPNSTSI 941
>LOX22_HORVU (Q8GSM3) Lipoxygenase 2.2, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:2) Length = 932 Score = 44.7 bits (104), Expect = 1e-04 Identities = 27/70 (38%), Positives = 38/70 (54%) Frame = -1 Query: 471 DAKALEAFKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLT 292 D + +AF+ F K+ I +QV N D +NR G PY+LL P + + A+ + Sbjct: 864 DGEVDKAFQVFQKKMRDIAEQVEEWNKDDSRRNRHGAGVVPYVLLRP-LNGNPMDAKTVM 922 Query: 291 ARGIPNSISI 262 GIPNSISI Sbjct: 923 EMGIPNSISI 932
>LOXC_ARATH (P38418) Lipoxygenase, chloroplast precursor (EC 1.13.11.12)| Length = 896 Score = 43.5 bits (101), Expect = 3e-04 Identities = 28/64 (43%), Positives = 36/64 (56%) Frame = -1 Query: 453 AFKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPN 274 AF+RF KL+ +E + N + LKNR G Y LL P TS+H G+T G+P Sbjct: 839 AFERFKGKLQYLEGVIDERNVNITLKNRAGAGVVKYELLKP-TSEH-----GVTGMGVPY 892 Query: 273 SISI 262 SISI Sbjct: 893 SISI 896
>SYP_MYCTU (O05814) Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline--tRNA| ligase) (ProRS) Length = 582 Score = 31.2 bits (69), Expect = 1.4 Identities = 20/40 (50%), Positives = 23/40 (57%) Frame = +1 Query: 241 TTDVLRSDGYAVRDAPGGEPLGLSRVVGGVWVEQHVWELG 360 T DVL DG VR G +G+SR+V V EQH ELG Sbjct: 438 TADVLGEDGKPVRLTMGSYGIGVSRLV-AVVAEQHHDELG 476
>SEPP1_PONPY (Q5R8W9) Selenoprotein P precursor (SeP)| Length = 381 Score = 30.4 bits (67), Expect = 2.5 Identities = 15/30 (50%), Positives = 16/30 (53%) Frame = -3 Query: 364 AGQVPIHAALPKHLRPHGTGRGAHRQGHPE 275 A P H A P L H +G HRQGHPE Sbjct: 231 APDAPTHPA-PPGLHHHHKHKGQHRQGHPE 259
>SEPP1_HUMAN (P49908) Selenoprotein P precursor (SeP)| Length = 381 Score = 30.4 bits (67), Expect = 2.5 Identities = 15/30 (50%), Positives = 16/30 (53%) Frame = -3 Query: 364 AGQVPIHAALPKHLRPHGTGRGAHRQGHPE 275 A P H A P L H +G HRQGHPE Sbjct: 231 APNAPTHPA-PPGLHHHHKHKGQHRQGHPE 259
>UD12_MOUSE (P70691) UDP-glucuronosyltransferase 1-2 precursor (EC 2.4.1.17)| (UDPGT) (UGT1*0) (UGT1-02) (UGT1.2) (UGT1A2) (Bilirubin specific) Length = 533 Score = 30.0 bits (66), Expect = 3.2 Identities = 16/31 (51%), Positives = 19/31 (61%) Frame = +2 Query: 368 VRFLSCGSEFMATTCFSMPSSFAPNRLNASS 460 +R LSCG E+ AT C PSS+ PN L S Sbjct: 172 LRSLSCGIEYEATQC-PNPSSYIPNLLTRLS 201
>PTNAB_SHIFL (P69800) PTS system mannose-specific EIIAB component (EIIAB-Man)| [Includes: Mannose-specific phosphotransferase enzyme IIA component (EC 2.7.1.-) (PTS system mannose-specific EIIA component) (EIII-Man); Mannose-specific phosphotransferase enz Length = 322 Score = 30.0 bits (66), Expect = 3.2 Identities = 15/32 (46%), Positives = 23/32 (71%) Frame = -1 Query: 471 DAKALEAFKRFGAKLEGIEKQVVAMNSDPQLK 376 D K +EAFK+ A+ GIE +V +++DP+LK Sbjct: 283 DEKDIEAFKKLNAR--GIELEVRKVSTDPKLK 312
>PTNAB_ECOLI (P69797) PTS system mannose-specific EIIAB component (EIIAB-Man)| [Includes: Mannose-specific phosphotransferase enzyme IIA component (EC 2.7.1.-) (PTS system mannose-specific EIIA component) (EIII-Man); Mannose-specific phosphotransferase enz Length = 322 Score = 30.0 bits (66), Expect = 3.2 Identities = 15/32 (46%), Positives = 23/32 (71%) Frame = -1 Query: 471 DAKALEAFKRFGAKLEGIEKQVVAMNSDPQLK 376 D K +EAFK+ A+ GIE +V +++DP+LK Sbjct: 283 DEKDIEAFKKLNAR--GIELEVRKVSTDPKLK 312
>PTNAB_ECOL6 (P69798) PTS system mannose-specific EIIAB component (EIIAB-Man)| [Includes: Mannose-specific phosphotransferase enzyme IIA component (EC 2.7.1.-) (PTS system mannose-specific EIIA component) (EIII-Man); Mannose-specific phosphotransferase enz Length = 322 Score = 30.0 bits (66), Expect = 3.2 Identities = 15/32 (46%), Positives = 23/32 (71%) Frame = -1 Query: 471 DAKALEAFKRFGAKLEGIEKQVVAMNSDPQLK 376 D K +EAFK+ A+ GIE +V +++DP+LK Sbjct: 283 DEKDIEAFKKLNAR--GIELEVRKVSTDPKLK 312
>PTNAB_ECO57 (P69799) PTS system mannose-specific EIIAB component (EIIAB-Man)| [Includes: Mannose-specific phosphotransferase enzyme IIA component (EC 2.7.1.-) (PTS system mannose-specific EIIA component) (EIII-Man); Mannose-specific phosphotransferase enz Length = 322 Score = 30.0 bits (66), Expect = 3.2 Identities = 15/32 (46%), Positives = 23/32 (71%) Frame = -1 Query: 471 DAKALEAFKRFGAKLEGIEKQVVAMNSDPQLK 376 D K +EAFK+ A+ GIE +V +++DP+LK Sbjct: 283 DEKDIEAFKKLNAR--GIELEVRKVSTDPKLK 312
>SPIKE_CVBM (P15777) Spike glycoprotein precursor (Peplomer protein) (E2)| [Contains: Spike protein S1 (90B); Spike protein S2 (90A)] Length = 1363 Score = 29.3 bits (64), Expect = 5.5 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%) Frame = +2 Query: 224 KSMRSRRRTCSDQMDMLFGMPLA---VSPSACPVWSEVFG*SSMYGNLAGPVRFLSCGSE 394 +S R T + + + +P A VS W+ FG + + PV + Sbjct: 414 QSFNYRIDTTATSCQLYYNLPAANVSVSRFNPSTWNRRFGFTEQFVFKPQPVGVFTHHDV 473 Query: 395 FMATTCFSMPSSFAPNRLNAS 457 A CF PS+F P +L+ S Sbjct: 474 VYAQHCFKAPSNFCPCKLDGS 494
>FOXJ3_MOUSE (Q8BUR3) Forkhead box protein J3| Length = 623 Score = 29.3 bits (64), Expect = 5.5 Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 4/47 (8%) Frame = -3 Query: 388 PAAQEPHRAGQVPIHAALPKHLRPHGTGRG----AHRQGHPEQHIHL 260 P+ PHR +P H P+H PH H Q HP H H+ Sbjct: 380 PSPHTPHRPHGLPQHPQRPQHPAPHPQQHSQLQPPHSQ-HPPPHQHI 425
>FRIZ3_DROME (O77438) Protein frizzled-3 precursor (dFz3)| Length = 581 Score = 28.9 bits (63), Expect = 7.2 Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 5/72 (6%) Frame = -1 Query: 345 MLLYPNTSDHTGQ--AEGLTARGIPNSISI*SEHVRR---RDLMLLCYPCLLTPELACVC 181 M PN + HT Q AE A+ +P S S R L LC P + P AC Sbjct: 55 MTALPNLAGHTNQLEAELQIAKLVPLIESGCSRRARFLLCSSLFPLCTPDVPRPVAACKL 114 Query: 180 VCDRELCRCMNN 145 +C+ CM N Sbjct: 115 LCETVRGECMEN 126 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 65,798,930 Number of Sequences: 219361 Number of extensions: 1363705 Number of successful extensions: 3820 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 3665 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3790 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3188886965 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
