Clone Name	rbastl21h10
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	emb|AL049539.21|HSJ836N17 Human DNA sequence from clone RP5-836N...	42	0.24
2	gb|AC150919.6| Bos taurus BAC CH240-303F16 (Children's Hospital...	40	0.93
3	emb|CR932493.1|CNS0KY8T Paramecium tetraurelia, Small GTPase rab...	40	0.93
4	gb|AC135114.4| Mus musculus BAC clone RP24-69H7 from chromosome ...	40	0.93
5	emb|CR361563.10| Zebrafish DNA sequence from clone CH211-254L20 ...	40	0.93
6	gb|AC122933.4| Mus musculus BAC clone RP23-18P3 from 14, complet...	40	0.93
7	gb|AC131723.1| Mus musculus BAC clone RP23-144E24 from 1, comple...	40	0.93
8	gb|AC022202.12| Homo sapiens BAC clone RP11-321E8 from 7, comple...	40	0.93
9	gb|AC098801.2| Drosophila melanogaster 3L BAC RP98-12G7 (Roswell...	40	0.93
10	gb|AC103794.2| Homo sapiens chromosome 11, clone CTD-3096P4, com...	40	0.93
11	dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D...	40	0.93
12	dbj|AP003904.3| Oryza sativa (japonica cultivar-group) genomic D...	40	0.93
13	gb|AE003567.4| Drosophila melanogaster chromosome 3L, section 18...	40	0.93
14	emb|BX927343.16| Zebrafish DNA sequence from clone CH211-57L21 i...	40	0.93
15	emb|AL136969.7| Human DNA sequence from clone RP1-207J11 on chro...	40	0.93
16	gb|AF484084.1| Lymnaea stagnalis voltage-dependent T-type calciu...	38	3.7
17	gb|AY422211.1| Homo sapiens cholesteryl ester transfer protein, ...	38	3.7
18	ref|XM_718563.1| Plasmodium yoelii yoelii str. 17XNL antiviral p...	38	3.7
19	gb|AC073042.7| Homo sapiens BAC clone CTD-2105K18 from 7, comple...	38	3.7
20	emb|AL121984.14|HSA277C14 Human DNA sequence from clone RP11-277...	38	3.7
21	emb|AL121938.10|HSDJ167O5 Human DNA sequence from clone RP1-167O...	38	3.7
22	gb|AE016828.2| Coxiella burnetii RSA 493, complete genome	38	3.7
23	emb|BX908767.8| Zebrafish DNA sequence from clone DKEY-66B12 in ...	38	3.7
24	gb|AC096920.2| Homo sapiens chromosome 3 clone RP11-804H8, compl...	38	3.7
25	emb|BX663605.6| Zebrafish DNA sequence from clone DKEY-14I19 in ...	38	3.7
26	ref|XM_628587.1| Cryptosporidium parvum Iowa II myosin'unconvent...	38	3.7
27	gb|AC116380.14| Mus musculus chromosome 1, clone RP23-6F21, comp...	38	3.7
28	gb|AC007351.40|AC007351 Homo sapiens 12 BAC RP11-492N15 (Roswell...	38	3.7
29	gb|AC105383.3| Homo sapiens BAC clone RP11-9G1 from 4, complete ...	38	3.7
30	gb|AC023825.8| Homo sapiens chromosome 16 clone RP11-322D14, com...	38	3.7
31	emb|BX324117.16| Mouse DNA sequence from clone RP23-389N3 on chr...	38	3.7
32	gb|AC000368.1|HSAC000368 Human Cosmid g1980a012 from 7q31.3, com...	38	3.7
33	gb|AF082992.1|AF082992 Molgula occulta ForkHead 1 (MoccFH1) mRNA...	38	3.7
34	dbj|AP001093.5| Homo sapiens genomic DNA, chromosome 11q, clone:...	38	3.7
35	dbj|AK116176.1| Ciona intestinalis cDNA, clone:citb013l21, full ...	38	3.7
36	gb|AC005689.1|AC005689 Homo sapiens clone UWGC:g5129z153 from 7q...	38	3.7
37	gb|AC005584.1|AC005584 Homo sapiens clone UWGC:g5129z012 from 7q...	38	3.7
38	gb|AC004063.1|AC004063 Homo sapiens chromosome 4 clone B32I8, co...	38	3.7
39	emb|Z74618.1|HSLUCA1 Human DNA sequence from clone XXcos-1 on ch...	38	3.7
40	emb|AL808143.5| Mouse DNA sequence from clone RP23-384K11 on chr...	38	3.7

---

>emb|AL049539.21|HSJ836N17 Human DNA sequence from clone RP5-836N17 on chromosome 20q11.1-11.21
             Contains the 3' end of the HCK for hemopoietic cell
             kinase, the gene for novel protein (KIAA0255), the RPL24P1
             gene for ribosomal protein L24 pseudogene 1 and two CpG
             Islands, complete sequence
          Length = 111694

 Score = 42.1 bits (21), Expect = 0.24
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 47    ttcaaatcagaattttgaaatcatcaagt 75
             ||||| ||||||||| |||||||||||||
Sbjct: 39515 ttcaactcagaatttggaaatcatcaagt 39487

---

>gb|AC150919.6| Bos taurus  BAC CH240-303F16 (Children's Hospital Oakland Research
             Institute Bovine BAC Library (male)) complete sequence
          Length = 160376

 Score = 40.1 bits (20), Expect = 0.93
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 47    ttcaaatcagaattttgaaa 66
             ||||||||||||||||||||
Sbjct: 47258 ttcaaatcagaattttgaaa 47239

---

>emb|CR932493.1|CNS0KY8T Paramecium tetraurelia, Small GTPase rab, putative, complete gene
          Length = 3001

 Score = 40.1 bits (20), Expect = 0.93
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 6   ttaactaaatataatattaa 25
           ||||||||||||||||||||
Sbjct: 891 ttaactaaatataatattaa 872

---

>gb|AC135114.4| Mus musculus BAC clone RP24-69H7 from chromosome 14, complete sequence
          Length = 181062

 Score = 40.1 bits (20), Expect = 0.93
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 47     ttcaaatcagaattttgaaatcat 70
              ||||| ||||||||||||||||||
Sbjct: 180291 ttcaagtcagaattttgaaatcat 180268

---

>emb|CR361563.10| Zebrafish DNA sequence from clone CH211-254L20 in linkage group 25,
             complete sequence
          Length = 150089

 Score = 40.1 bits (20), Expect = 0.93
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 10    ctaaatataatattaattgc 29
             ||||||||||||||||||||
Sbjct: 24645 ctaaatataatattaattgc 24626

---

>gb|AC122933.4| Mus musculus BAC clone RP23-18P3 from 14, complete sequence
          Length = 224941

 Score = 40.1 bits (20), Expect = 0.93
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 47    ttcaaatcagaattttgaaatcat 70
             ||||| ||||||||||||||||||
Sbjct: 23816 ttcaagtcagaattttgaaatcat 23793

---

>gb|AC131723.1| Mus musculus BAC clone RP23-144E24 from 1, complete sequence
          Length = 200656

 Score = 40.1 bits (20), Expect = 0.93
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 46     gttcaaatcagaattttgaa 65
              ||||||||||||||||||||
Sbjct: 171292 gttcaaatcagaattttgaa 171273

---

>gb|AC022202.12| Homo sapiens BAC clone RP11-321E8 from 7, complete sequence
          Length = 95097

 Score = 40.1 bits (20), Expect = 0.93
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 49    caaatcagaattttgaaatc 68
             ||||||||||||||||||||
Sbjct: 51195 caaatcagaattttgaaatc 51214

---

>gb|AC098801.2| Drosophila melanogaster 3L BAC RP98-12G7 (Roswell Park Cancer
            Institute Drosophila BAC Library) complete sequence
          Length = 178563

 Score = 40.1 bits (20), Expect = 0.93
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 3    agcttaactaaatataatat 22
            ||||||||||||||||||||
Sbjct: 7670 agcttaactaaatataatat 7689

---

>gb|AC103794.2| Homo sapiens chromosome 11, clone CTD-3096P4, complete sequence
          Length = 211445

 Score = 40.1 bits (20), Expect = 0.93
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 9     actaaatataatattaattg 28
             ||||||||||||||||||||
Sbjct: 54741 actaaatataatattaattg 54722

---

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 0.93
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 6        ttaactaaatataatattaa 25
                ||||||||||||||||||||
Sbjct: 19042760 ttaactaaatataatattaa 19042779

---

>dbj|AP003904.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1051_A08
          Length = 137583

 Score = 40.1 bits (20), Expect = 0.93
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     ttaactaaatataatattaa 25
             ||||||||||||||||||||
Sbjct: 67547 ttaactaaatataatattaa 67566

---

>gb|AE003567.4| Drosophila melanogaster chromosome 3L, section 18 of 83 of the complete
             sequence
          Length = 166593

 Score = 40.1 bits (20), Expect = 0.93
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 3     agcttaactaaatataatat 22
             ||||||||||||||||||||
Sbjct: 21000 agcttaactaaatataatat 21019

---

>emb|BX927343.16| Zebrafish DNA sequence from clone CH211-57L21 in linkage group 16,
             complete sequence
          Length = 166820

 Score = 40.1 bits (20), Expect = 0.93
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 11    taaatataatattaattgcc 30
             ||||||||||||||||||||
Sbjct: 41400 taaatataatattaattgcc 41419

---

>emb|AL136969.7| Human DNA sequence from clone RP1-207J11 on chromosome 7 Contains
            ESTs and STSs. Contains two zinc finger protein
            pseudogenes, a putative novel gene and an HNRPC
            (heterogeneous nuclear ribonucleoprotein C (C1/C2))
            pseudogene, complete sequence
          Length = 79666

 Score = 40.1 bits (20), Expect = 0.93
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 49   caaatcagaattttgaaatc 68
            ||||||||||||||||||||
Sbjct: 1869 caaatcagaattttgaaatc 1888

---

>gb|AF484084.1| Lymnaea stagnalis voltage-dependent T-type calcium channel alpha-1
            subunit mRNA, partial cds, alternatively spliced
          Length = 5991

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 30   cgaacatgttcaccgagttcaaa 52
            ||||||| |||||||||||||||
Sbjct: 4784 cgaacatcttcaccgagttcaaa 4762

---

>gb|AY422211.1| Homo sapiens cholesteryl ester transfer protein, plasma (CETP) gene,
             complete cds
          Length = 25612

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 65    aatcatcaagttcaacatt 83
             |||||||||||||||||||
Sbjct: 22570 aatcatcaagttcaacatt 22552

---

>ref|XM_718563.1| Plasmodium yoelii yoelii str. 17XNL antiviral protein ski2
           (PY03503) partial mRNA
          Length = 4077

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 64  aaatcatcaagttcaacattata 86
           |||||||||||||||| ||||||
Sbjct: 923 aaatcatcaagttcaaaattata 901

---

>gb|AC073042.7| Homo sapiens BAC clone CTD-2105K18 from 7, complete sequence
          Length = 182038

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 44     gagttcaaatcagaatttt 62
              |||||||||||||||||||
Sbjct: 156734 gagttcaaatcagaatttt 156716

---

>emb|AL121984.14|HSA277C14 Human DNA sequence from clone RP11-277C14 on chromosome 1 Contains part
              of the DNM3 gene for dynamin 3, complete sequence
          Length = 155941

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 11     taaatataatattaattgc 29
              |||||||||||||||||||
Sbjct: 145433 taaatataatattaattgc 145451

---

>emb|AL121938.10|HSDJ167O5 Human DNA sequence from clone RP1-167O5 on chromosome 6q22.1-23.3
            Contains the 3' end of the TPD52L1 gene encoding two
            variants of tumor protein D52-like 1 protein, the gene
            for CGI-130 protein and a CpG island, complete sequence
          Length = 156054

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 9    actaaatataatattaatt 27
            |||||||||||||||||||
Sbjct: 8222 actaaatataatattaatt 8204

---

>gb|AE016828.2| Coxiella burnetii RSA 493, complete genome
          Length = 1995281

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 61     ttgaaatcatcaagttcaa 79
              |||||||||||||||||||
Sbjct: 346905 ttgaaatcatcaagttcaa 346923

---

>emb|BX908767.8| Zebrafish DNA sequence from clone DKEY-66B12 in linkage group 3, complete
              sequence
          Length = 177868

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 8      aactaaatataatattaat 26
              |||||||||||||||||||
Sbjct: 102612 aactaaatataatattaat 102630

---

>gb|AC096920.2| Homo sapiens chromosome 3 clone RP11-804H8, complete sequence
          Length = 192324

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 57    aattttgaaatcatcaagt 75
             |||||||||||||||||||
Sbjct: 83643 aattttgaaatcatcaagt 83661

---

>emb|BX663605.6| Zebrafish DNA sequence from clone DKEY-14I19 in linkage group 7, complete
              sequence
          Length = 170764

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 8      aactaaatataatattaat 26
              |||||||||||||||||||
Sbjct: 149362 aactaaatataatattaat 149380

---

>ref|XM_628587.1| Cryptosporidium parvum Iowa II myosin'unconventional myosin fused to
            an RCC1 domain (unique)' (cgd7_4350), partial mRNA
          Length = 4983

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 62   tgaaatcatcaagttcaac 80
            |||||||||||||||||||
Sbjct: 4903 tgaaatcatcaagttcaac 4885

---

>gb|AC116380.14| Mus musculus chromosome 1, clone RP23-6F21, complete sequence
          Length = 232429

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 46     gttcaaatcagaattttga 64
              |||||||||||||||||||
Sbjct: 154095 gttcaaatcagaattttga 154077

---

>gb|AC007351.40|AC007351 Homo sapiens 12 BAC RP11-492N15 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 195501

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 45   agttcaaatcagaattttgaaat 67
            |||||||||||||||||| ||||
Sbjct: 2401 agttcaaatcagaatttttaaat 2423

---

>gb|AC105383.3| Homo sapiens BAC clone RP11-9G1 from 4, complete sequence
          Length = 173956

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 69    atcaagttcaacattatat 87
             |||||||||||||||||||
Sbjct: 22413 atcaagttcaacattatat 22395

---

>gb|AC023825.8| Homo sapiens chromosome 16 clone RP11-322D14, complete sequence
          Length = 217521

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 65     aatcatcaagttcaacatt 83
              |||||||||||||||||||
Sbjct: 196587 aatcatcaagttcaacatt 196605

---

>emb|BX324117.16| Mouse DNA sequence from clone RP23-389N3 on chromosome X, complete
             sequence
          Length = 155139

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 6     ttaactaaatataatatta 24
             |||||||||||||||||||
Sbjct: 93630 ttaactaaatataatatta 93612

---

>gb|AC000368.1|HSAC000368 Human Cosmid g1980a012 from 7q31.3, complete sequence
          Length = 40047

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 55    agaattttgaaatcatcaa 73
             |||||||||||||||||||
Sbjct: 11658 agaattttgaaatcatcaa 11676

---

>gb|AF082992.1|AF082992 Molgula occulta ForkHead 1 (MoccFH1) mRNA, complete cds
          Length = 2201

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 67   tcatcaagttcaacattat 85
            |||||||||||||||||||
Sbjct: 1354 tcatcaagttcaacattat 1372

---

>dbj|AP001093.5| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-774L13, complete
             sequence
          Length = 91073

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 61    ttgaaatcatcaagttcaa 79
             |||||||||||||||||||
Sbjct: 68910 ttgaaatcatcaagttcaa 68928

---

>dbj|AK116176.1| Ciona intestinalis cDNA, clone:citb013l21, full insert sequence
          Length = 1394

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 48   tcaaatcagaattttgaaa 66
            |||||||||||||||||||
Sbjct: 1141 tcaaatcagaattttgaaa 1123

---

>gb|AC005689.1|AC005689 Homo sapiens clone UWGC:g5129z153 from 7q31.3, complete sequence
          Length = 44312

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 55   agaattttgaaatcatcaa 73
            |||||||||||||||||||
Sbjct: 8667 agaattttgaaatcatcaa 8685

---

>gb|AC005584.1|AC005584 Homo sapiens clone UWGC:g5129z012 from 7q31, complete sequence
          Length = 43407

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 55    agaattttgaaatcatcaa 73
             |||||||||||||||||||
Sbjct: 42545 agaattttgaaatcatcaa 42563

---

>gb|AC004063.1|AC004063 Homo sapiens chromosome 4 clone B32I8, complete sequence
          Length = 177014

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 50     aaatcagaattttgaaatc 68
              |||||||||||||||||||
Sbjct: 115629 aaatcagaattttgaaatc 115611

---

>emb|Z74618.1|HSLUCA1 Human DNA sequence from clone XXcos-1 on chromosome 3, complete
             sequence
          Length = 30377

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 57    aattttgaaatcatcaagt 75
             |||||||||||||||||||
Sbjct: 11401 aattttgaaatcatcaagt 11419

---

>emb|AL808143.5| Mouse DNA sequence from clone RP23-384K11 on chromosome 2, complete
             sequence
          Length = 202474

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 8     aactaaatataatattaat 26
             |||||||||||||||||||
Sbjct: 77336 aactaaatataatattaat 77354


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,330,209
Number of Sequences: 3902068
Number of extensions: 1330209
Number of successful extensions: 112874
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 112760
Number of HSP's gapped (non-prelim): 114
length of query: 87
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 66
effective length of database: 17,151,101,840
effective search space: 1131972721440
effective search space used: 1131972721440
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)

---