ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl21h08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TRI37_HUMAN (O94972) Tripartite motif protein 37 (Mulibrey nanis... 28 5.4

>TRI37_HUMAN (O94972) Tripartite motif protein 37 (Mulibrey nanism protein)|
          Length = 964

 Score = 28.5 bits (62), Expect = 5.4
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +2

Query: 14  IKFQAQHPTLLSYSTSKHWQVTTDNSSSTKKLQ 112
           ++FQ + PT    S  +HW +T   ++ T  +Q
Sbjct: 399 LRFQVRSPTFFQKSRDQHWYITQLEAAQTSYIQ 431


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,405,736
Number of Sequences: 219361
Number of extensions: 334152
Number of successful extensions: 644
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 644
length of database: 80,573,946
effective HSP length: 21
effective length of database: 75,967,365
effective search space used: 1823216760
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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