Clone Name | rbastl21h08 |
---|---|
Clone Library Name | barley_pub |
>emb|Z12021.1|GMCATALG G.max gene for catalase Length = 4687 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 actctacatccaaacattgg 70 |||||||||||||||||||| Sbjct: 2829 actctacatccaaacattgg 2848
>gb|AC004082.1|AC004082 Homo sapiens PAC clone RP5-897G10 from 7q11.23-q21.1, complete sequence Length = 98029 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 gttactctacatccaaacat 67 |||||||||||||||||||| Sbjct: 95634 gttactctacatccaaacat 95653
>dbj|AK065005.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001E11, full insert sequence Length = 2911 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 gtattaacaaggaataaagt 20 |||||||||||||||||||| Sbjct: 2880 gtattaacaaggaataaagt 2861
>gb|AF035254.1|AF035254 Glycine max catalase (cat3) mRNA, complete cds Length = 1715 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 actctacatccaaacattgg 70 |||||||||||||||||||| Sbjct: 809 actctacatccaaacattgg 828
>gb|AF035253.1|AF035253 Glycine max catalase (cat2) mRNA, complete cds Length = 1831 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 actctacatccaaacattgg 70 |||||||||||||||||||| Sbjct: 841 actctacatccaaacattgg 860
>gb|AF035252.1|AF035252 Glycine max catalase (cat1) mRNA, complete cds Length = 1733 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 actctacatccaaacattgg 70 |||||||||||||||||||| Sbjct: 856 actctacatccaaacattgg 875
>gb|BC053719.1| Mus musculus expressed sequence C87499, mRNA (cDNA clone MGC:60825 IMAGE:30053512), complete cds Length = 1851 Score = 38.2 bits (19), Expect = 6.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 62 aaacattggcaggtgacaactga 84 ||||||| ||||||||||||||| Sbjct: 526 aaacatttgcaggtgacaactga 548
>dbj|AK135883.1| Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length enriched library, clone:7420432O12 product:weakly similar to PRAMEl6 [Mus musculus], full insert sequence Length = 1828 Score = 38.2 bits (19), Expect = 6.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 62 aaacattggcaggtgacaactga 84 ||||||| ||||||||||||||| Sbjct: 525 aaacatttgcaggtgacaactga 547
>gb|AC093805.3| Homo sapiens BAC clone RP11-326O9 from 4, complete sequence Length = 165538 Score = 38.2 bits (19), Expect = 6.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 50 tactctacatccaaacatt 68 ||||||||||||||||||| Sbjct: 69307 tactctacatccaaacatt 69289
>dbj|AK163216.1| Mus musculus 2 cells egg cDNA, RIKEN full-length enriched library, clone:B020002E16 product:hypothetical protein, full insert sequence Length = 1523 Score = 38.2 bits (19), Expect = 6.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 62 aaacattggcaggtgacaactga 84 ||||||| ||||||||||||||| Sbjct: 216 aaacatttgcaggtgacaactga 238
>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome Length = 5751492 Score = 38.2 bits (19), Expect = 6.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 16 aaagttccaggcacaacac 34 ||||||||||||||||||| Sbjct: 1292800 aaagttccaggcacaacac 1292818
>gb|AC093142.2| Homo sapiens chromosome 3 clone RP11-301D8, complete sequence Length = 210592 Score = 38.2 bits (19), Expect = 6.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 44 ctcagttactctacatcca 62 ||||||||||||||||||| Sbjct: 142626 ctcagttactctacatcca 142608
>gb|AY110365.1| Zea mays CL38215_1 mRNA sequence Length = 607 Score = 38.2 bits (19), Expect = 6.5 Identities = 25/27 (92%) Strand = Plus / Plus Query: 1 gtattaacaaggaataaagttccaggc 27 |||||||||||| |||||||| ||||| Sbjct: 25 gtattaacaaggcataaagttacaggc 51
>ref|NM_198663.1| Mus musculus expressed sequence C87499 (C87499), mRNA Length = 1851 Score = 38.2 bits (19), Expect = 6.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 62 aaacattggcaggtgacaactga 84 ||||||| ||||||||||||||| Sbjct: 526 aaacatttgcaggtgacaactga 548
>emb|AL772394.7| Mouse DNA sequence from clone RP23-67C1 on chromosome 4, complete sequence Length = 89437 Score = 38.2 bits (19), Expect = 6.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 62 aaacattggcaggtgacaactga 84 ||||||| ||||||||||||||| Sbjct: 76221 aaacatttgcaggtgacaactga 76199 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 753,102 Number of Sequences: 3902068 Number of extensions: 753102 Number of successful extensions: 48265 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 15 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 48233 Number of HSP's gapped (non-prelim): 32 length of query: 137 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 116 effective length of database: 17,151,101,840 effective search space: 1989527813440 effective search space used: 1989527813440 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)