>emb|CR354613.7| Zebrafish DNA sequence from clone CH211-112G7 in linkage group 21,
              complete sequence
          Length = 179432

 Score = 38.2 bits (19), Expect = 1.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 16     cactaacaacaccatattc 34
              |||||||||||||||||||
Sbjct: 107139 cactaacaacaccatattc 107121

>emb|AJ429829.1|HIM429829 Human immunodeficiency virus type 1 proviral partial env gene for
          gp120, strain 97NE37
          Length = 1080

 Score = 38.2 bits (19), Expect = 1.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 10 caacagcactaacaacacc 28
          |||||||||||||||||||
Sbjct: 59 caacagcactaacaacacc 77

>gb|U24448.1|HIV1U24448 Human immunodeficiency virus type 1 cntrl 1, clone 2,  accessory
           region genes, complete cds
          Length = 1391

 Score = 38.2 bits (19), Expect = 1.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 11  aacagcactaacaacacca 29
           |||||||||||||||||||
Sbjct: 529 aacagcactaacaacacca 547

>ref|NM_111093.2| Arabidopsis thaliana BIG (DARK OVER-EXPRESSION OF CAB 1);
            ubiquitin-protein ligase/ zinc ion binding AT3G02260
            (BIG) mRNA, complete cds
          Length = 15465

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 8    tgcaacagcactaacaac 25
            ||||||||||||||||||
Sbjct: 2336 tgcaacagcactaacaac 2319

>emb|CT025234.2| Xenopus tropicalis finished cDNA, clone TEgg139e06
          Length = 1657

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                 
Query: 10  caacagcactaacaacaccata 31
           |||||||||||||| |||||||
Sbjct: 144 caacagcactaacatcaccata 165

>gb|AC009755.7|ATAC009755 Arabidopsis thaliana chromosome III BAC F14P3 genomic sequence,
             complete sequence
          Length = 94369

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 8     tgcaacagcactaacaac 25
             ||||||||||||||||||
Sbjct: 29421 tgcaacagcactaacaac 29404

>emb|AL139334.10| Human DNA sequence from clone RP1-250C18 on chromosome 6q11.1-12,
             complete sequence
          Length = 102010

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                   
Query: 14    agcactaacaacaccatattcc 35
             |||| |||||||||||||||||
Sbjct: 48301 agcattaacaacaccatattcc 48280

>emb|AL078594.36|HSDJ293L8 Human DNA sequence from clone RP1-293L8 on chromosome 6q22.2-22.33
             Contains the 3' part of a novel gene, the 5' part of a
             novel gene, the HEY2 gene for hairy/enhancer-of-split
             related with YRPW motif 2, a novel gene, the 5' part of
             the gene for endoplasmic reticulum associated protein 140
             kDa (ERAP140) (similar to nucleolar protein C7B) and four
             putative CpG islands, complete sequence
          Length = 164808

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 14    agcactaacaacaccata 31
             ||||||||||||||||||
Sbjct: 62465 agcactaacaacaccata 62482

>ref|XM_963176.1| PREDICTED: Tribolium castaneum similar to CG13788-PB, isoform B
           (LOC656666), mRNA
          Length = 1164

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                 
Query: 11  aacagcactaacaacaccatat 32
           ||||||| ||||||||||||||
Sbjct: 389 aacagcagtaacaacaccatat 368

>gb|AC159616.2| Mus musculus BAC clone RP24-497G20 from chromosome 12, complete sequence
          Length = 160836

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                    
Query: 3      acaactgcaacagcactaacaa 24
              ||||||||||||| ||||||||
Sbjct: 131262 acaactgcaacagaactaacaa 131241

>gb|AF507018.1| Arabidopsis thaliana auxin transport protein (BIG) gene, complete cds
          Length = 17338

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 8    tgcaacagcactaacaac 25
            ||||||||||||||||||
Sbjct: 3030 tgcaacagcactaacaac 3013

>gb|DQ220743.1| Plasmodium knowlesi isolate A1 merozoite surface protein 1 (Msp1)
            gene, partial cds
          Length = 5324

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                  
Query: 9    gcaacagcactaacaacaccat 30
            |||||||||| |||||||||||
Sbjct: 4084 gcaacagcaccaacaacaccat 4105

>emb|BX004870.13| Zebrafish DNA sequence from clone CH211-168H9 in linkage group 5,
              complete sequence
          Length = 153127

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 22     caacaccatattccgcac 39
              ||||||||||||||||||
Sbjct: 100803 caacaccatattccgcac 100820

>emb|AM055942.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ia
          Length = 1923819

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 21      acaacaccatattccgca 38
               ||||||||||||||||||
Sbjct: 1302749 acaacaccatattccgca 1302732


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 234,465
Number of Sequences: 3902068
Number of extensions: 234465
Number of successful extensions: 61124
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 61100
Number of HSP's gapped (non-prelim): 24
length of query: 42
length of database: 17,233,045,268
effective HSP length: 20
effective length of query: 22
effective length of database: 17,155,003,908
effective search space: 377410085976
effective search space used: 377410085976
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)