>emb|AL163528.8|HS109K15 Homo sapiens chromosome 9 BAC RP11-109K15, complete sequence
          Length = 184517

 Score = 42.1 bits (21), Expect = 0.49
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 65    gtcttgcataccacaaaacat 85
             |||||||||||||||||||||
Sbjct: 78487 gtcttgcataccacaaaacat 78507

>emb|AL163192.6|HS298E2 Homo sapiens chromosome 9 BAC RP11-298E2, complete sequence
          Length = 140741

 Score = 42.1 bits (21), Expect = 0.49
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 6     aggcaggtaacaaatatcagt 26
             |||||||||||||||||||||
Sbjct: 24919 aggcaggtaacaaatatcagt 24899

>emb|AL133378.16| Human DNA sequence from clone RP1-91B17 on chromosome 6q13-14.3
             Contains part of the BAI3 gene for brain-specific
             angiogenesis inhibitor 3, complete sequence
          Length = 113826

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 37    aataattttaagtacatagt 56
             ||||||||||||||||||||
Sbjct: 96361 aataattttaagtacatagt 96342

>gb|AC090022.12| Homo sapiens 12 BAC RP11-154D9 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 126469

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    taataattttaagtacatag 55
             ||||||||||||||||||||
Sbjct: 64745 taataattttaagtacatag 64764

>gb|AC122687.2| Homo sapiens 12 BAC RP13-501J24 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 141411

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 41   attttaagtacatagtttga 60
            ||||||||||||||||||||
Sbjct: 1854 attttaagtacatagtttga 1873

>gb|AC124943.4| Homo sapiens 12 BAC RP11-20E24 (Roswell Park Cancer Institute Human
           BAC Library) complete sequence
          Length = 47466

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 41  attttaagtacatagtttga 60
           ||||||||||||||||||||
Sbjct: 148 attttaagtacatagtttga 129

>gb|AC087434.3| Pan troglodytes clone RP43-90F9, complete sequence
          Length = 161716

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 38     ataattttaagtacatagt 56
              |||||||||||||||||||
Sbjct: 122823 ataattttaagtacatagt 122805

>gb|AC005081.3| Homo sapiens BAC clone CTA-270D13 from 7, complete sequence
          Length = 180290

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 38     ataattttaagtacatagt 56
              |||||||||||||||||||
Sbjct: 174068 ataattttaagtacatagt 174086

>gb|AC074386.6| Homo sapiens BAC clone RP11-464H1 from 7, complete sequence
          Length = 66610

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                        
Query: 77    acaaaacataacagtatacgaaggaaa 103
             ||||||| ||| |||||||||||||||
Sbjct: 32786 acaaaacgtaaaagtatacgaaggaaa 32760

>gb|AC004889.1| Homo sapiens PAC clone RP4-798C17 from 7, complete sequence
          Length = 130030

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 77    acaaaacataacagtatacgaaggaaa 103
             ||||||| ||| |||||||||||||||
Sbjct: 91593 acaaaacgtaaaagtatacgaaggaaa 91619

>gb|AC158924.6| Mus musculus chromosome 18, clone RP23-109P21, complete sequence
          Length = 254968

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 72     ataccacaaaacataacag 90
              |||||||||||||||||||
Sbjct: 142559 ataccacaaaacataacag 142577

>gb|AC144823.2| Danio rerio clone CH211-150P19, complete sequence
          Length = 159419

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 40     aattttaagtacatagttt 58
              |||||||||||||||||||
Sbjct: 130614 aattttaagtacatagttt 130632

>gb|AC144828.2| Danio rerio clone CH211-201D21, complete sequence
          Length = 187958

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 40   aattttaagtacatagttt 58
            |||||||||||||||||||
Sbjct: 1579 aattttaagtacatagttt 1597

>emb|AL513543.14| Human DNA sequence from clone RP11-343J24 on chromosome 1 Contains part
             of the CHRM3 gene for cholinergic receptor muscarinic 3
             and a novel gene (DKFZp667K2218), complete sequence
          Length = 90907

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 51    catagtttgaccgtgtctt 69
             |||||||||||||||||||
Sbjct: 51171 catagtttgaccgtgtctt 51189

>emb|AL359714.18| Human DNA sequence from clone RP11-22A15 on chromosome 6 Contains part
             of the BAI3 gene for brain-specific angiogenesis inhibitor
             3, complete sequence
          Length = 156129

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 40    aattttaagtacatagttt 58
             |||||||||||||||||||
Sbjct: 46607 aattttaagtacatagttt 46589

>emb|AL139405.11| Human DNA sequence from clone RP11-393E10 on chromosome 10 Contains
            the 5' end of a variant of the gene for a novel protein
            (FLJ10210) and the 3' end of the gene for a novel protein
            (MGC11034), complete sequence
          Length = 179829

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 36   taataattttaagtacata 54
            |||||||||||||||||||
Sbjct: 3097 taataattttaagtacata 3079

>emb|AJ400821.1|CRU400821 Capsella rubella ORF1, ORF2, ORF3, ORF4, ORF5 and ORF6 (partial)
          Length = 26241

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 30    tcccaataataattttaagtaca 52
             ||||||||||||||| |||||||
Sbjct: 12227 tcccaataataatttaaagtaca 12205

>gb|AC116992.2| Homo sapiens chromosome 3 clone RP11-668D4, complete sequence
          Length = 204162

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 36    taataattttaagtacata 54
             |||||||||||||||||||
Sbjct: 84850 taataattttaagtacata 84868

>gb|AC069025.5| Homo sapiens chromosome 10 clone RP11-526G5, complete sequence
          Length = 211583

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 36    taataattttaagtacata 54
             |||||||||||||||||||
Sbjct: 10845 taataattttaagtacata 10863

>gb|AC092038.3| Homo sapiens chromosome 3 clone RP11-89F18, complete sequence
          Length = 170948

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 36     taataattttaagtacata 54
              |||||||||||||||||||
Sbjct: 151540 taataattttaagtacata 151558

>dbj|AK047734.1| Mus musculus adult male corpus striatum cDNA, RIKEN full-length
           enriched library, clone:C030018L17 product:REGULATOR OF
           G-PROTEIN SIGNALING 20 (RGS20) (REGULATOR OF G-PROTEIN
           SIGNALING Z1) homolog [Mus musculus], full insert
           sequence
          Length = 1532

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 41  attttaagtacatagtttg 59
           |||||||||||||||||||
Sbjct: 757 attttaagtacatagtttg 739

>gb|AC150255.7| Aedes aegypti, clone XX-85K2, complete sequence
          Length = 164368

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 33   caataataattttaagtac 51
            |||||||||||||||||||
Sbjct: 6531 caataataattttaagtac 6513

>gb|AF045555.1|AF045555 Homo sapiens wbscr1 (WBSCR1) and wbscr5 (WBSCR5) genes, complete cds,
             alternatively spliced and replication factor C subunit 2
             (RFC2) gene, complete cds
          Length = 90082

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 38    ataattttaagtacatagt 56
             |||||||||||||||||||
Sbjct: 28914 ataattttaagtacatagt 28896

>gb|AC079967.7| Homo sapiens chromosome 8, clone RP11-1058B10, complete sequence
          Length = 169865

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 29     atcccaataataattttaa 47
              |||||||||||||||||||
Sbjct: 118117 atcccaataataattttaa 118135

>emb|BX119910.7| Zebrafish DNA sequence from clone DKEY-17C10 in linkage group 10,
              complete sequence
          Length = 199662

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 40     aattttaagtacatagttt 58
              |||||||||||||||||||
Sbjct: 165461 aattttaagtacatagttt 165443

>gb|AC102242.10| Mus musculus chromosome 1, clone RP24-141F9, complete sequence
          Length = 146925

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 41   attttaagtacatagtttg 59
            |||||||||||||||||||
Sbjct: 9410 attttaagtacatagtttg 9428

>emb|BX000484.12| Zebrafish DNA sequence from clone CH211-12E1 in linkage group 2,
            complete sequence
          Length = 158932

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 34   aataataattttaagtacatagt 56
            |||||||||||||| ||||||||
Sbjct: 7584 aataataattttaaatacatagt 7562

>dbj|AB025602.1| Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:F14A1
          Length = 55790

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 34    aataataattttaagtaca 52
             |||||||||||||||||||
Sbjct: 27900 aataataattttaagtaca 27882

>emb|AL807234.6| Mouse DNA sequence from clone RP23-293E12 on chromosome 4, complete
             sequence
          Length = 226546

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 68    ttgcataccacaaaacata 86
             |||||||||||||||||||
Sbjct: 75834 ttgcataccacaaaacata 75852

>emb|AL672064.17| Mouse DNA sequence from clone RP23-91G19 on chromosome X, complete
             sequence
          Length = 152177

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 107   cgggtaagttaaggccaca 125
             |||||||||||||||||||
Sbjct: 14398 cgggtaagttaaggccaca 14416


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,461,971
Number of Sequences: 3902068
Number of extensions: 1461971
Number of successful extensions: 114470
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 114412
Number of HSP's gapped (non-prelim): 58
length of query: 159
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 137
effective length of database: 17,147,199,772
effective search space: 2349166368764
effective search space used: 2349166368764
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)