>EXOC4_ARATH (Q93YU5) Probable exocyst complex component 4 (Exocyst complex|
            component Sec8)
          Length = 1053

 Score = 54.7 bits (130), Expect = 5e-08
 Identities = 24/44 (54%), Positives = 33/44 (75%)
 Frame = -2

Query: 392  LLGFIAEQEYLFSAKEYLSILKVNVPGREIPMDAERRISQILGH 261
            LL FIAE + +F+  EY ++LKVNVPGR+ P DA+ R+ +IL H
Sbjct: 1010 LLAFIAEHDQMFTPTEYSNLLKVNVPGRDTPSDAQSRLLEILSH 1053

>Y13L_BPT4 (P39505) Hypothetical 9.4 kDa protein in nrdB-nrdA intergenic|
           region
          Length = 83

 Score = 33.1 bits (74), Expect = 0.16
 Identities = 16/58 (27%), Positives = 30/58 (51%)
 Frame = +3

Query: 24  LHPKYHTFTRIKNKRSIQNTTNLLSMRQQIVHYLPICRHQKKKPNRNNKINYSYKESR 197
           L+P Y T +  ++    + T +L+S+R +     P C H  KK N+ N + + Y + +
Sbjct: 21  LNPMYGTISPTRDVPHTKETRDLISLRTKQGAEYPPCPHCGKKVNKGNALRWHYDKCK 78

>WNT4_DROME (P40589) Protein Wnt-4 precursor (dWnt-4)|
          Length = 539

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 16/56 (28%), Positives = 25/56 (44%)
 Frame = +3

Query: 42  TFTRIKNKRSIQNTTNLLSMRQQIVHYLPICRHQKKKPNRNNKINYSYKESRGRYC 209
           T  R K   +I+   N  SMRQ     +   + ++KKP ++      Y E+   YC
Sbjct: 423 TLLRQKYNEAIRKAPNQRSMRQVSSSRMKKPKQRRKKPQQSQYTTLYYLETSPSYC 478

>DPO3_CLOTE (Q895K2) DNA polymerase III polC-type (EC 2.7.7.7) (PolIII)|
          Length = 1427

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 19/67 (28%), Positives = 26/67 (38%), Gaps = 2/67 (2%)
 Frame = +3

Query: 18  LKLHPKYHTFTRIKNKRSIQNTTNLLSMRQQIVHYLPICRHQKKKPNRNNKINYSYKESR 197
           +K  P YH    +KNK  ++N   L+S             H  KKP     +   Y+E  
Sbjct: 596 IKKSPTYHVIILVKNKIGLKNLYKLISESH--------LNHFYKKPRMPKSLINKYREGL 647

Query: 198 --GRYCE 212
             G  CE
Sbjct: 648 MIGSACE 654

>SELD_DICDI (Q94497) Selenide, water dikinase (EC 2.7.9.3) (Selenophosphate|
           synthetase) (Selenium donor protein) (Fragment)
          Length = 370

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
 Frame = +3

Query: 39  HTFTRIKNKRSIQNTTNL-----LSMRQQIVHYLPICRHQKKKPNRNNKINYSYKESRGR 203
           H  T +     + ++TNL     L +R +I H LPI +H KK     + +N+ +K  +G 
Sbjct: 275 HAATDVTGFGILGHSTNLAQNQLLPIRFEI-HTLPIIKHMKK---LEDHLNHPFKLLKGT 330

Query: 204 YCETS 218
             ETS
Sbjct: 331 SAETS 335

>HYBE_ECOLI (P0AAN1) Hydrogenase-2 operon protein hybE|
          Length = 162

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
 Frame = +1

Query: 220 PPVIAKIILPNSI*WPKICEIRR-SASIGISLP-GTLTFSMLKYSFAENKYSCSAMNP 387
           P +++ +I P      ++  +R+ S  IG+ LP GT+TF++ +        SCS M+P
Sbjct: 59  PWMLSAVIFPGP---DQLWPLRKVSEKIGLQLPYGTMTFTVGELDGVSQYLSCSLMSP 113

>HYBE_ECOL6 (P0AAN2) Hydrogenase-2 operon protein hybE|
          Length = 162

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
 Frame = +1

Query: 220 PPVIAKIILPNSI*WPKICEIRR-SASIGISLP-GTLTFSMLKYSFAENKYSCSAMNP 387
           P +++ +I P      ++  +R+ S  IG+ LP GT+TF++ +        SCS M+P
Sbjct: 59  PWMLSAVIFPGP---DQLWPLRKVSEKIGLQLPYGTMTFTVGELDGVSQYLSCSLMSP 113

>HYBE_ECO57 (Q8XBW0) Hydrogenase-2 operon protein hybE|
          Length = 162

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
 Frame = +1

Query: 220 PPVIAKIILPNSI*WPKICEIRR-SASIGISLP-GTLTFSMLKYSFAENKYSCSAMNP 387
           P +++ +I P      ++  +R+ S  IG+ LP GT+TF++ +        SCS M+P
Sbjct: 59  PWMLSAVIFPGP---DQLWPLRKVSEKIGLQLPYGTMTFTVGELDGVSQYLSCSLMSP 113

>RPC1_PLAFA (P27625) DNA-directed RNA polymerase III largest subunit (EC 2.7.7.6)|
          Length = 2339

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = +3

Query: 69   SIQNTTNLLSMRQQIVHYLPICRHQKKKPNRNNKIN 176
            SI ++  LLS + +I  YLP  +HQ K  N NN  N
Sbjct: 1042 SISSSHLLLSYKNKIP-YLPHVQHQNKTSNMNNIYN 1076


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,414,099
Number of Sequences: 219361
Number of extensions: 775010
Number of successful extensions: 1697
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1695
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 1375720320
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)