>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  131 bits (66), Expect = 5e-28
 Identities = 93/102 (91%)
 Strand = Plus / Plus

                                                                            
Query: 4        gttgtcctatagcttcatctgaccagcaccacctttgaatgaaccatataaaggtctcga 63
                |||| |||||| |||||||||||||  ||| |||||||||||||||||||||||||||||
Sbjct: 22922081 gttgacctataacttcatctgaccaatacctcctttgaatgaaccatataaaggtctcga 22922140

                                                          
Query: 64       cctcctgaagctgaatatatcagttattcgatgcgaatgcgg 105
                ||||||||||||||||||||| |||||| |||  ||||||||
Sbjct: 22922141 cctcctgaagctgaatatatcggttatttgataggaatgcgg 22922182



 Score =  129 bits (65), Expect = 2e-27
 Identities = 89/97 (91%)
 Strand = Plus / Plus

                                                                            
Query: 9        cctatagcttcatctgaccagcaccacctttgaatgaaccatataaaggtctcgacctcc 68
                |||||||||||||||||||| |||| || ||||||||||| |||||||||||||||||||
Sbjct: 22885749 cctatagcttcatctgaccaacacctcccttgaatgaaccgtataaaggtctcgacctcc 22885808

                                                     
Query: 69       tgaagctgaatatatcagttattcgatgcgaatgcgg 105
                |||||||||||||||| |||||| ||| ||| |||||
Sbjct: 22885809 tgaagctgaatatatcggttatttgatacgagtgcgg 22885845



 Score =  113 bits (57), Expect = 1e-22
 Identities = 75/81 (92%)
 Strand = Plus / Plus

                                                                            
Query: 11       tatagcttcatctgaccagcaccacctttgaatgaaccatataaaggtctcgacctcctg 70
                |||||||||||||||||| |||| || ||| |||||||||||||||||||||||||||||
Sbjct: 22902280 tatagcttcatctgaccaacacctcccttgtatgaaccatataaaggtctcgacctcctg 22902339

                                     
Query: 71       aagctgaatatatcagttatt 91
                ||| |||||||||| ||||||
Sbjct: 22902340 aagttgaatatatctgttatt 22902360

>dbj|AP003981.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1019_E02
          Length = 121607

 Score =  131 bits (66), Expect = 5e-28
 Identities = 93/102 (91%)
 Strand = Plus / Plus

                                                                          
Query: 4      gttgtcctatagcttcatctgaccagcaccacctttgaatgaaccatataaaggtctcga 63
              |||| |||||| |||||||||||||  ||| |||||||||||||||||||||||||||||
Sbjct: 115348 gttgacctataacttcatctgaccaatacctcctttgaatgaaccatataaaggtctcga 115407

                                                        
Query: 64     cctcctgaagctgaatatatcagttattcgatgcgaatgcgg 105
              ||||||||||||||||||||| |||||| |||  ||||||||
Sbjct: 115408 cctcctgaagctgaatatatcggttatttgataggaatgcgg 115449



 Score =  129 bits (65), Expect = 2e-27
 Identities = 89/97 (91%)
 Strand = Plus / Plus

                                                                         
Query: 9     cctatagcttcatctgaccagcaccacctttgaatgaaccatataaaggtctcgacctcc 68
             |||||||||||||||||||| |||| || ||||||||||| |||||||||||||||||||
Sbjct: 79016 cctatagcttcatctgaccaacacctcccttgaatgaaccgtataaaggtctcgacctcc 79075

                                                  
Query: 69    tgaagctgaatatatcagttattcgatgcgaatgcgg 105
             |||||||||||||||| |||||| ||| ||| |||||
Sbjct: 79076 tgaagctgaatatatcggttatttgatacgagtgcgg 79112



 Score =  113 bits (57), Expect = 1e-22
 Identities = 75/81 (92%)
 Strand = Plus / Plus

                                                                         
Query: 11    tatagcttcatctgaccagcaccacctttgaatgaaccatataaaggtctcgacctcctg 70
             |||||||||||||||||| |||| || ||| |||||||||||||||||||||||||||||
Sbjct: 95547 tatagcttcatctgaccaacacctcccttgtatgaaccatataaaggtctcgacctcctg 95606

                                  
Query: 71    aagctgaatatatcagttatt 91
             ||| |||||||||| ||||||
Sbjct: 95607 aagttgaatatatctgttatt 95627

>ref|XM_478769.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2997

 Score =  127 bits (64), Expect = 7e-27
 Identities = 88/96 (91%)
 Strand = Plus / Minus

                                                                        
Query: 10   ctatagcttcatctgaccagcaccacctttgaatgaaccatataaaggtctcgacctcct 69
            ||||||||||||||||||| |||| || ||||||||||| ||||||||||||||||||||
Sbjct: 2997 ctatagcttcatctgaccaacacctcccttgaatgaaccgtataaaggtctcgacctcct 2938

                                                
Query: 70   gaagctgaatatatcagttattcgatgcgaatgcgg 105
            ||||||||||||||| |||||| ||| ||| |||||
Sbjct: 2937 gaagctgaatatatcggttatttgatacgagtgcgg 2902

>ref|XM_478770.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3199

 Score =  113 bits (57), Expect = 1e-22
 Identities = 75/81 (92%)
 Strand = Plus / Minus

                                                                        
Query: 11   tatagcttcatctgaccagcaccacctttgaatgaaccatataaaggtctcgacctcctg 70
            |||||||||||||||||| |||| || ||| |||||||||||||||||||||||||||||
Sbjct: 3107 tatagcttcatctgaccaacacctcccttgtatgaaccatataaaggtctcgacctcctg 3048

                                 
Query: 71   aagctgaatatatcagttatt 91
            ||| |||||||||| ||||||
Sbjct: 3047 aagttgaatatatctgttatt 3027

>dbj|AK100076.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001F09, full
            insert sequence
          Length = 3200

 Score =  113 bits (57), Expect = 1e-22
 Identities = 75/81 (92%)
 Strand = Plus / Minus

                                                                        
Query: 11   tatagcttcatctgaccagcaccacctttgaatgaaccatataaaggtctcgacctcctg 70
            |||||||||||||||||| |||| || ||| |||||||||||||||||||||||||||||
Sbjct: 3107 tatagcttcatctgaccaacacctcccttgtatgaaccatataaaggtctcgacctcctg 3048

                                 
Query: 71   aagctgaatatatcagttatt 91
            ||| |||||||||| ||||||
Sbjct: 3047 aagttgaatatatctgttatt 3027

>gb|AY107748.1| Zea mays PCO123054 mRNA sequence
          Length = 1762

 Score = 73.8 bits (37), Expect = 9e-11
 Identities = 70/81 (86%)
 Strand = Plus / Minus

                                                                        
Query: 10   ctatagcttcatctgaccagcaccacctttgaatgaaccatataaaggtctcgacctcct 69
            ||||||||||||||||||| | || ||  ||||||| ||||||||||| |||||||||||
Sbjct: 1677 ctatagcttcatctgaccaacgcctcccctgaatgatccatataaaggcctcgacctcct 1618

                                 
Query: 70   gaagctgaatatatcagttat 90
            |||||   | |||||||||||
Sbjct: 1617 gaagccataaatatcagttat 1597

>gb|AC149231.2| Pan troglodytes BAC clone CH251-481H1 from 7, complete sequence
          Length = 217836

 Score = 42.1 bits (21), Expect = 0.33
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 75     tgaatatatcagttattcgat 95
              |||||||||||||||||||||
Sbjct: 108877 tgaatatatcagttattcgat 108857

>gb|AC147094.2| Pan troglodytes BAC clone RP43-52H15 from 7, complete sequence
          Length = 183596

 Score = 42.1 bits (21), Expect = 0.33
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 75    tgaatatatcagttattcgat 95
             |||||||||||||||||||||
Sbjct: 45647 tgaatatatcagttattcgat 45627

>gb|AC142338.1| Pan troglodytes BAC clone RP43-41H4 from 7, complete sequence
          Length = 186208

 Score = 42.1 bits (21), Expect = 0.33
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 75   tgaatatatcagttattcgat 95
            |||||||||||||||||||||
Sbjct: 6103 tgaatatatcagttattcgat 6123

>gb|AC083875.1|AC083875 Homo sapiens chromosome 7 clone RP11-699P13, complete sequence
          Length = 150913

 Score = 42.1 bits (21), Expect = 0.33
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 75     tgaatatatcagttattcgat 95
              |||||||||||||||||||||
Sbjct: 108966 tgaatatatcagttattcgat 108986

>dbj|AP006351.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT04E21, TM0336,
           complete sequence
          Length = 113233

 Score = 42.1 bits (21), Expect = 0.33
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 8   tcctatagcttcatctgacca 28
           |||||||||||||||||||||
Sbjct: 799 tcctatagcttcatctgacca 779

>emb|AL513475.13| Human DNA sequence from clone RP11-277I20 on chromosome 6 Contains part
              of the UTRN gene for utrophin (homologous to dystrophin)
              (DRP, DRP1, DMDL), a novel pseudogene similar to
              hypothetical protein HT023 and a novel pseudogene, complete
              sequence
          Length = 191752

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 74     ctgaatatatcagttattcgatgc 97
              ||||||||||||||||||| ||||
Sbjct: 141168 ctgaatatatcagttattctatgc 141191

>ref|XM_508026.1| PREDICTED: Pan troglodytes similar to VPS10 domain receptor SorCS1c
           splice variant (LOC450725), mRNA
          Length = 4185

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 22  ctgaccagcaccacctttg 40
           |||||||||||||||||||
Sbjct: 826 ctgaccagcaccacctttg 844

>gb|BC085024.1| Xenopus laevis cDNA clone MGC:98990 IMAGE:5512923, complete cds
          Length = 1444

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 65 ctcctgaagctgaatatat 83
          |||||||||||||||||||
Sbjct: 83 ctcctgaagctgaatatat 65

>gb|AC149580.19| Medicago truncatula clone mth2-123f14, complete sequence
          Length = 123565

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 77    aatatatcagttattcgat 95
             |||||||||||||||||||
Sbjct: 23576 aatatatcagttattcgat 23558

>gb|AC135465.23| Medicago truncatula clone mth2-24h22, complete sequence
          Length = 109043

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 65    ctcctgaagctgaatatat 83
             |||||||||||||||||||
Sbjct: 18155 ctcctgaagctgaatatat 18137

>emb|X74463.1|HPV7 Human papillomavirus type 7 genomic DNA
          Length = 8027

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 7    gtcctatagcttcatctga 25
            |||||||||||||||||||
Sbjct: 5405 gtcctatagcttcatctga 5423

>gb|AC009562.9| Homo sapiens chromosome 15, clone RP11-348B17, complete sequence
          Length = 221475

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 20     atctgaccagcaccacctt 38
              |||||||||||||||||||
Sbjct: 124294 atctgaccagcaccacctt 124312


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 834,912
Number of Sequences: 3902068
Number of extensions: 834912
Number of successful extensions: 63056
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 63014
Number of HSP's gapped (non-prelim): 42
length of query: 112
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 91
effective length of database: 17,151,101,840
effective search space: 1560750267440
effective search space used: 1560750267440
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)