Clone Name | rbastl21g07 |
---|---|
Clone Library Name | barley_pub |
>emb|AL356608.23| Human DNA sequence from clone RP11-724N1 on chromosome 10 Contains the 5' end of the CNNM2 gene for cyclin M2 and a CpG island, complete sequence Length = 161053 Score = 44.1 bits (22), Expect = 0.063 Identities = 25/26 (96%) Strand = Plus / Minus Query: 62 tagtacaaaactttccaaaacgaatc 87 |||||||||||||||||||| ||||| Sbjct: 21091 tagtacaaaactttccaaaatgaatc 21066
>gb|AC009144.5|AC009144 Homo sapiens chromosome 16 clone RP11-551E2, complete sequence Length = 173758 Score = 44.1 bits (22), Expect = 0.063 Identities = 25/26 (96%) Strand = Plus / Minus Query: 62 tagtacaaaactttccaaaacgaatc 87 |||||||||||||||||||| ||||| Sbjct: 134879 tagtacaaaactttccaaaatgaatc 134854
>gb|AC093440.2| Drosophila melanogaster clone BACR34H03, complete sequence Length = 192132 Score = 42.1 bits (21), Expect = 0.25 Identities = 21/21 (100%) Strand = Plus / Minus Query: 4 aaaccgaaacaccaaaaaccc 24 ||||||||||||||||||||| Sbjct: 183319 aaaccgaaacaccaaaaaccc 183299
>gb|AC093047.1| Drosophila melanogaster, chromosome 2L, region 38D-38E, BAC clone BACR31P14, complete sequence Length = 156806 Score = 42.1 bits (21), Expect = 0.25 Identities = 21/21 (100%) Strand = Plus / Minus Query: 4 aaaccgaaacaccaaaaaccc 24 ||||||||||||||||||||| Sbjct: 28289 aaaccgaaacaccaaaaaccc 28269
>gb|AE003667.3| Drosophila melanogaster chromosome 2L, section 76 of 83 of the complete sequence Length = 257666 Score = 42.1 bits (21), Expect = 0.25 Identities = 21/21 (100%) Strand = Plus / Minus Query: 4 aaaccgaaacaccaaaaaccc 24 ||||||||||||||||||||| Sbjct: 146311 aaaccgaaacaccaaaaaccc 146291
>gb|AC002443.1|AC002443 Drosophila melanogaster DNA sequence (P1 DS02109 (D53)), complete sequence Length = 79826 Score = 42.1 bits (21), Expect = 0.25 Identities = 21/21 (100%) Strand = Plus / Minus Query: 4 aaaccgaaacaccaaaaaccc 24 ||||||||||||||||||||| Sbjct: 39852 aaaccgaaacaccaaaaaccc 39832
>gb|DP000016.1| Pan troglodytes target 1 genomic scaffold Length = 1623484 Score = 38.2 bits (19), Expect = 3.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 53 aggaaagagtagtacaaaa 71 ||||||||||||||||||| Sbjct: 218393 aggaaagagtagtacaaaa 218411
>gb|AC087512.2| Pan troglodytes clone RP43-144M20, complete sequence Length = 120797 Score = 38.2 bits (19), Expect = 3.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 53 aggaaagagtagtacaaaa 71 ||||||||||||||||||| Sbjct: 7571 aggaaagagtagtacaaaa 7589
>gb|AC146205.2| Pan troglodytes BAC clone RP43-34B6 from 7, complete sequence Length = 187725 Score = 38.2 bits (19), Expect = 3.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 53 aggaaagagtagtacaaaa 71 ||||||||||||||||||| Sbjct: 18571 aggaaagagtagtacaaaa 18589
>gb|AC093476.6| Mus musculus chromosome 6, clone RP23-55C15, complete sequence Length = 259659 Score = 38.2 bits (19), Expect = 3.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 70 aactttccaaaacgaatca 88 ||||||||||||||||||| Sbjct: 111834 aactttccaaaacgaatca 111852
>gb|AE004394.1| Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, section 51 of 93 of the complete chromosome Length = 10117 Score = 38.2 bits (19), Expect = 3.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 2 ccaaaccgaaacaccaaaa 20 ||||||||||||||||||| Sbjct: 9582 ccaaaccgaaacaccaaaa 9600
>gb|AC002066.2| Homo sapiens BAC clone CTB-30H15 from 7, complete sequence Length = 151770 Score = 38.2 bits (19), Expect = 3.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 53 aggaaagagtagtacaaaa 71 ||||||||||||||||||| Sbjct: 9534 aggaaagagtagtacaaaa 9552
>emb|AL645971.12| Mouse DNA sequence from clone RP23-378J19 on chromosome 11 Vontains the 5' end of the gene for novel protein similar to human RAP1 GTPase activating protein 1 RAP1GA1,,a novel gene and three CpG islands, complete sequence Length = 102898 Score = 38.2 bits (19), Expect = 3.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 51 tcaggaaagagtagtacaa 69 ||||||||||||||||||| Sbjct: 78010 tcaggaaagagtagtacaa 78028
>gb|DP000025.1| Gorilla gorilla gorilla target 1 genomic scaffold Length = 1787293 Score = 38.2 bits (19), Expect = 3.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 53 aggaaagagtagtacaaaa 71 ||||||||||||||||||| Sbjct: 144731 aggaaagagtagtacaaaa 144749
>gb|AF260225.1|AF260225 Homo sapiens TESTIN 2 and TESTIN 3 genes, complete cds, alternatively spliced Length = 162354 Score = 38.2 bits (19), Expect = 3.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 53 aggaaagagtagtacaaaa 71 ||||||||||||||||||| Sbjct: 151790 aggaaagagtagtacaaaa 151808
>emb|AJ133269.1|HSA133269 Homo sapiens caveolin-1/-2 locus, Contig1, D7S522, genes CAV2 (exons 1, 2a, and 2b), CAV1 (exons 1 and 2) Length = 190537 Score = 38.2 bits (19), Expect = 3.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 53 aggaaagagtagtacaaaa 71 ||||||||||||||||||| Sbjct: 9534 aggaaagagtagtacaaaa 9552 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 781,812 Number of Sequences: 3902068 Number of extensions: 781812 Number of successful extensions: 63745 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 16 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 63712 Number of HSP's gapped (non-prelim): 33 length of query: 90 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 69 effective length of database: 17,151,101,840 effective search space: 1183426026960 effective search space used: 1183426026960 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)