>gb|AC000134.14| Homo sapiens Chromosome 11q13 BAC Clone 137c7, complete sequence
          Length = 203300

 Score = 46.1 bits (23), Expect = 0.068
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 60    acatcatctctacaatacaaaaa 82
             |||||||||||||||||||||||
Sbjct: 79319 acatcatctctacaatacaaaaa 79297

>dbj|AP001462.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-869B15, complete
             sequence
          Length = 106886

 Score = 46.1 bits (23), Expect = 0.068
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 60    acatcatctctacaatacaaaaa 82
             |||||||||||||||||||||||
Sbjct: 11985 acatcatctctacaatacaaaaa 11963

>gb|AC163769.4| Pan troglodytes BAC clone CH251-59O12 from chromosome unknown, complete
             sequence
          Length = 185010

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 61    catcatctctacaatacaaaaa 82
             ||||||||||||||||||||||
Sbjct: 76774 catcatctctacaatacaaaaa 76795

>emb|AL009047.1|HS1156N12 Human DNA sequence from clone RP5-1156N12 on chromosome X, complete
              sequence
          Length = 146360

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 8      tatgcatatatctaattatcc 28
              |||||||||||||||||||||
Sbjct: 129232 tatgcatatatctaattatcc 129212

>gb|AC104984.14| Homo sapiens chromosome 17, clone RP11-354P11, complete sequence
          Length = 175136

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 4     taattatgcatatatctaatt 24
             |||||||||||||||||||||
Sbjct: 31962 taattatgcatatatctaatt 31982

>gb|AC102297.12| Mus musculus chromosome 1, clone RP24-392K18, complete sequence
          Length = 167248

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 300   aataatttatagtatacaac 319
             ||||||||||||||||||||
Sbjct: 26311 aataatttatagtatacaac 26292

>gb|DP000017.1| Sus scrofa target 1 genomic scaffold
          Length = 1471440

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 56     acatacatcatctctacaat 75
              ||||||||||||||||||||
Sbjct: 613862 acatacatcatctctacaat 613881

>gb|AC087180.2| Sus scrofa clone RP44-338P10, complete sequence
          Length = 117818

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    acatacatcatctctacaat 75
             ||||||||||||||||||||
Sbjct: 36224 acatacatcatctctacaat 36243

>emb|AL513542.11| Human DNA sequence from clone RP11-129J12 on chromosome 10 Contains a
             novel gene and three CpG islands, complete sequence
          Length = 46619

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 4     taattatgcatatatctaat 23
             ||||||||||||||||||||
Sbjct: 17396 taattatgcatatatctaat 17377

>gb|AY509253.1| Ostreid herpesvirus 1, complete genome
          Length = 207439

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 64     catctctacaatacaaaaac 83
              ||||||||||||||||||||
Sbjct: 206409 catctctacaatacaaaaac 206390



 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 64     catctctacaatacaaaaac 83
              ||||||||||||||||||||
Sbjct: 185552 catctctacaatacaaaaac 185571

>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome
          Length = 5205140

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 264   attggatgcgtctactgcag 283
             ||||||||||||||||||||
Sbjct: 75700 attggatgcgtctactgcag 75681

>gb|AC108073.3| Homo sapiens BAC clone RP11-713C19 from 4, complete sequence
          Length = 225639

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 246    gatcaccagaatttgcaaat 265
              ||||||||||||||||||||
Sbjct: 149966 gatcaccagaatttgcaaat 149985

>gb|AC021148.8| Homo sapiens BAC clone RP11-472B18 from 4, complete sequence
          Length = 124102

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 173   aaataaatgctagtgtacaa 192
             ||||||||||||||||||||
Sbjct: 87729 aaataaatgctagtgtacaa 87748

>gb|DP000053.1| Oryctolagus cuniculus target 126 genomic scaffold
          Length = 470930

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 8      tatgcatatatctaattatc 27
              ||||||||||||||||||||
Sbjct: 228336 tatgcatatatctaattatc 228355

>gb|AC013718.6| Homo sapiens BAC clone RP11-116I17 from 2, complete sequence
          Length = 177855

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 63    tcatctctacaatacaaaaa 82
             ||||||||||||||||||||
Sbjct: 71264 tcatctctacaatacaaaaa 71283

>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome
          Length = 5277274

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 264   attggatgcgtctactgcag 283
             ||||||||||||||||||||
Sbjct: 70167 attggatgcgtctactgcag 70148

>emb|AJ272152.1|HSA272152 Homo sapiens partial ugd gene for UDPglucose dehydrogenase, exon 2
          Length = 876

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 173 aaataaatgctagtgtacaa 192
           ||||||||||||||||||||
Sbjct: 116 aaataaatgctagtgtacaa 97

>emb|AJ272274.1|HSA272274 Homo sapiens partial ugd gene for UDP-glucose dehydrogenase, exon 2
          Length = 876

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 173 aaataaatgctagtgtacaa 192
           ||||||||||||||||||||
Sbjct: 116 aaataaatgctagtgtacaa 97


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,385,046
Number of Sequences: 3902068
Number of extensions: 3385046
Number of successful extensions: 91717
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 91649
Number of HSP's gapped (non-prelim): 68
length of query: 319
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 297
effective length of database: 17,147,199,772
effective search space: 5092718332284
effective search space used: 5092718332284
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)