ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl21e01 |
|---|---|
| Clone Library Name | barley_pub |
>AURKB_HUMAN (Q96GD4) Serine/threonine-protein kinase 12 (EC 2.7.11.1) (Aurora-| and Ipl1-like midbody-associated protein 1) (AIM-1) (Aurora/IPL1-related kinase 2) (Aurora-related kinase 2) (STK-1) (Aurora-B) Length = 344 Score = 32.0 bits (71), Expect = 0.41 Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 3/86 (3%) Frame = +3 Query: 30 YTRVNVYIVIQCKGQGILYKQLHCNTMCRLCTINQQ---TKKFNQYKSNCWPHQQK*IPK 200 Y R +Y++++ +G LYK+L + CT ++Q T + + H +K I + Sbjct: 145 YDRRRIYLILEYAPRGELYKELQ-----KSCTFDEQRTATIMEELADALMYCHGKKVIHR 199 Query: 201 AQRPYSGKLLLRGWSAVAGFGFKVEA 278 +P + L L+G +A FG+ V A Sbjct: 200 DIKPENLLLGLKGELKIADFGWSVHA 225
>AURKB_MOUSE (O70126) Serine/threonine-protein kinase 12 (EC 2.7.11.1)| (Aurora-related kinase 2) (Serine/threonine-protein kinase 5) (STK-1) (Aurora-B) Length = 345 Score = 29.6 bits (65), Expect = 2.0 Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 3/86 (3%) Frame = +3 Query: 30 YTRVNVYIVIQCKGQGILYKQLHCNTMC---RLCTINQQTKKFNQYKSNCWPHQQK*IPK 200 Y + +Y++++ +G LYK+L + R TI ++ Y C H++K I + Sbjct: 150 YDQQRIYLILEYAPRGELYKELQKSRTFDEQRTATIMEELSDALTY---C--HKKKVIHR 204 Query: 201 AQRPYSGKLLLRGWSAVAGFGFKVEA 278 +P + L L+G +A FG+ V A Sbjct: 205 DIKPENLLLGLQGELKIADFGWSVHA 230
>AURKB_RAT (O55099) Serine/threonine-protein kinase 12 (EC 2.7.11.1) (Aurora-| and Ipl1-like midbody-associated protein 1) (AIM-1) (Aurora-B) Length = 343 Score = 29.6 bits (65), Expect = 2.0 Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 3/86 (3%) Frame = +3 Query: 30 YTRVNVYIVIQCKGQGILYKQLHCNTMC---RLCTINQQTKKFNQYKSNCWPHQQK*IPK 200 Y + +Y++++ +G LYK+L + R TI ++ Y C H++K I + Sbjct: 148 YDQQRIYLILEYAPRGELYKELQKSGTFDEQRTATIMEELSDALMY---C--HKKKVIHR 202 Query: 201 AQRPYSGKLLLRGWSAVAGFGFKVEA 278 +P + L L+G +A FG+ V A Sbjct: 203 DIKPENLLLGLQGELKIADFGWSVHA 228
>GSA_SHIFL (Q821C1) Glutamate-1-semialdehyde 2,1-aminomutase (EC 5.4.3.8)| (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) Length = 426 Score = 27.7 bits (60), Expect = 7.8 Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 2/26 (7%) Frame = -3 Query: 251 HCGPPTEEKLAGIRSLC--FGYLLLL 180 +C PP E L G+R+LC FG LL++ Sbjct: 211 NCVPPLPEFLPGLRALCDEFGALLII 236
>GSA_SALTY (P21267) Glutamate-1-semialdehyde 2,1-aminomutase (EC 5.4.3.8)| (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) Length = 426 Score = 27.7 bits (60), Expect = 7.8 Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 2/26 (7%) Frame = -3 Query: 251 HCGPPTEEKLAGIRSLC--FGYLLLL 180 +C PP E L G+R+LC FG LL++ Sbjct: 211 NCVPPLPEFLPGLRALCDEFGALLII 236
>GSA_SALTI (Q8Z9B4) Glutamate-1-semialdehyde 2,1-aminomutase (EC 5.4.3.8)| (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) Length = 426 Score = 27.7 bits (60), Expect = 7.8 Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 2/26 (7%) Frame = -3 Query: 251 HCGPPTEEKLAGIRSLC--FGYLLLL 180 +C PP E L G+R+LC FG LL++ Sbjct: 211 NCVPPLPEFLPGLRALCDEFGALLII 236
>GSA_SALPA (Q5PD43) Glutamate-1-semialdehyde 2,1-aminomutase (EC 5.4.3.8)| (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) Length = 426 Score = 27.7 bits (60), Expect = 7.8 Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 2/26 (7%) Frame = -3 Query: 251 HCGPPTEEKLAGIRSLC--FGYLLLL 180 +C PP E L G+R+LC FG LL++ Sbjct: 211 NCVPPLPEFLPGLRALCDEFGALLII 236
>GSA_ECOLI (P23893) Glutamate-1-semialdehyde 2,1-aminomutase (EC 5.4.3.8)| (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) Length = 426 Score = 27.7 bits (60), Expect = 7.8 Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 2/26 (7%) Frame = -3 Query: 251 HCGPPTEEKLAGIRSLC--FGYLLLL 180 +C PP E L G+R+LC FG LL++ Sbjct: 211 NCVPPLPEFLPGLRALCDEFGALLII 236
>GSA_ECOL6 (Q8FL16) Glutamate-1-semialdehyde 2,1-aminomutase (EC 5.4.3.8)| (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) Length = 426 Score = 27.7 bits (60), Expect = 7.8 Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 2/26 (7%) Frame = -3 Query: 251 HCGPPTEEKLAGIRSLC--FGYLLLL 180 +C PP E L G+R+LC FG LL++ Sbjct: 211 NCVPPLPEFLPGLRALCDEFGALLII 236
>GSA_PHOLL (Q7N845) Glutamate-1-semialdehyde 2,1-aminomutase (EC 5.4.3.8)| (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) Length = 427 Score = 27.7 bits (60), Expect = 7.8 Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 2/26 (7%) Frame = -3 Query: 251 HCGPPTEEKLAGIRSLC--FGYLLLL 180 +C PP E L G+R+LC FG LL++ Sbjct: 211 NCVPPQPEFLPGLRALCDEFGALLII 236
>ESM1_RAT (P97682) Endothelial cell-specific molecule 1 precursor (ESM-1| secretory protein) (ESM-1) (PG25) Length = 184 Score = 27.7 bits (60), Expect = 7.8 Identities = 9/19 (47%), Positives = 12/19 (63%) Frame = -1 Query: 115 LHIVLQWSCLYNMPCPLHC 59 LH+ + WS Y + CP HC Sbjct: 14 LHLGMAWSAKYAVDCPEHC 32
>ESM1_MOUSE (Q9QYY7) Endothelial cell-specific molecule 1 precursor (ESM-1| secretory protein) (ESM-1) Length = 184 Score = 27.7 bits (60), Expect = 7.8 Identities = 9/19 (47%), Positives = 12/19 (63%) Frame = -1 Query: 115 LHIVLQWSCLYNMPCPLHC 59 LH+ + WS Y + CP HC Sbjct: 14 LHLGMAWSAKYAVDCPEHC 32 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 46,514,689 Number of Sequences: 219361 Number of extensions: 888788 Number of successful extensions: 2203 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 2167 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2202 length of database: 80,573,946 effective HSP length: 73 effective length of database: 64,560,593 effective search space used: 1549454232 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
